RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 ANKRD17O75179 2603 aaKnown RBP10.95□□□□□ -0.66
PTCH1-201ENST00000331920 LINC01546A6NGU7 62 aa10.94□□□□□ -0.66
PTCH1-201ENST00000331920 LINC00336Q6ZUF6 198 aa10.94□□□□□ -0.66
PTCH1-201ENST00000331920 FAM104AQ969W3 186 aa10.94□□□□□ -0.66
PTCH1-201ENST00000331920 PIEZO1Q92508 2521 aa10.93□□□□□ -0.66
PTCH1-201ENST00000331920 H3BNG1 76 aa10.93□□□□□ -0.66
PTCH1-201ENST00000331920 IGF2RP11717 2491 aa10.93□□□□□ -0.66
PTCH1-201ENST00000331920 PRO0461Q9UI25 63 aa10.93□□□□□ -0.66
PTCH1-201ENST00000331920 WWC2-AS2Q96NR7 200 aa10.92□□□□□ -0.66
PTCH1-201ENST00000331920 MUC22E2RYF6 1773 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-201ENST00000331920 PLA2G2DQ9UNK4 145 aa10.9□□□□□ -0.66
PTCH1-201ENST00000331920 IGLV1-50A0A075B6I6 118 aa10.89□□□□□ -0.67
PTCH1-201ENST00000331920 Q8NAQ8 132 aa10.87□□□□□ -0.67
PTCH1-201ENST00000331920 Q1T7F1 81 aa10.87□□□□□ -0.67
PTCH1-201ENST00000331920 C15orf56Q8N910 161 aa10.86□□□□□ -0.67
PTCH1-201ENST00000331920 ZNF861PO60384 105 aa10.86□□□□□ -0.67
PTCH1-201ENST00000331920 KRTAP24-1Q3LI83 254 aa10.84□□□□□ -0.67
PTCH1-201ENST00000331920 BPTFQ12830 3046 aa10.84□□□□□ -0.67
PTCH1-201ENST00000331920 TLX1NBP0CAT3 122 aa10.82□□□□□ -0.68
PTCH1-201ENST00000331920 USP9XQ93008 2570 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-201ENST00000331920 SPTBN4Q9H254 2564 aa10.8□□□□□ -0.68
PTCH1-201ENST00000331920 Q8N377 158 aa10.79□□□□□ -0.68
PTCH1-201ENST00000331920 Q6ZSA8 131 aa10.79□□□□□ -0.68
PTCH1-201ENST00000331920 NCOR2Q9Y618 2525 aa10.78□□□□□ -0.68
PTCH1-201ENST00000331920 KCNQ1DNQ9H478 68 aa10.78□□□□□ -0.68
PTCH1-201ENST00000331920 H3BS24 57 aa10.75□□□□□ -0.69
PTCH1-201ENST00000331920 A0A0A0MQY5 61 aa10.75□□□□□ -0.69
PTCH1-201ENST00000331920 PRR26Q8N8Z3 221 aa10.74□□□□□ -0.69
PTCH1-201ENST00000331920 H7BZZ5 65 aa10.73□□□□□ -0.69
PTCH1-201ENST00000331920 KLKP1Q107X0 134 aa10.73□□□□□ -0.69
PTCH1-201ENST00000331920 CENPFP49454 3210 aa10.73□□□□□ -0.69
PTCH1-201ENST00000331920 C9orf163Q8N9P6 203 aa10.72□□□□□ -0.69
PTCH1-201ENST00000331920 LINC00528Q8N1L1 170 aa10.71□□□□□ -0.69
PTCH1-201ENST00000331920 IGLV7-43P04211 117 aa10.7□□□□□ -0.7
PTCH1-201ENST00000331920 LITAFQ99732 161 aa10.69□□□□□ -0.7
PTCH1-201ENST00000331920 PSORS1C2Q9UIG4 136 aa10.69□□□□□ -0.7
PTCH1-201ENST00000331920 A0A1B0GU33 70 aa10.68□□□□□ -0.7
PTCH1-201ENST00000331920 A0A087WTM6 91 aa10.67□□□□□ -0.7
PTCH1-201ENST00000331920 MTORP42345 2549 aa10.67□□□□□ -0.7
PTCH1-201ENST00000331920 USP24Q9UPU5 2620 aa10.65□□□□□ -0.71
PTCH1-201ENST00000331920 KRTAP10-11P60412 298 aa10.64□□□□□ -0.71
PTCH1-201ENST00000331920 EP400Q96L91 3159 aa10.63□□□□□ -0.71
PTCH1-201ENST00000331920 SPINK7P58062 85 aa10.62□□□□□ -0.71
PTCH1-201ENST00000331920 SPANXA2-OT1Q8N9U9 137 aa10.6□□□□□ -0.71
PTCH1-201ENST00000331920 EIF4EBP3O60516 100 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-201ENST00000331920 COL4A2P08572 1712 aa10.59□□□□□ -0.71
PTCH1-201ENST00000331920 K7EIL1 84 aa10.58□□□□□ -0.72
PTCH1-201ENST00000331920 SPRR4Q96PI1 79 aa10.58□□□□□ -0.72
PTCH1-201ENST00000331920 S4R3F8 94 aa10.58□□□□□ -0.72
PTCH1-201ENST00000331920 CHD8Q9HCK8 2581 aa10.57□□□□□ -0.72
PTCH1-201ENST00000331920 IGLV7-46A0A075B6I9 117 aa10.56□□□□□ -0.72
PTCH1-201ENST00000331920 HRES1P13985 223 aa10.56□□□□□ -0.72
PTCH1-201ENST00000331920 PRAC1Q96KF2 57 aa10.56□□□□□ -0.72
PTCH1-201ENST00000331920 CSAG1Q6PB30 78 aa10.53□□□□□ -0.72
PTCH1-201ENST00000331920 POLQO75417 2590 aa10.52□□□□□ -0.73
PTCH1-201ENST00000331920 H1FX-AS1Q4G0G2 97 aa10.5□□□□□ -0.73
PTCH1-201ENST00000331920 LINC00612Q8N6U2 182 aa10.5□□□□□ -0.73
PTCH1-201ENST00000331920 CASC10Q5T4H9 136 aa10.49□□□□□ -0.73
PTCH1-201ENST00000331920 R4GN34 69 aa10.46□□□□□ -0.73
PTCH1-201ENST00000331920 ANKRD11Q6UB99 2663 aaPredicted RBP10.46□□□□□ -0.73
PTCH1-201ENST00000331920 A0A1W2PNM2 257 aa10.46□□□□□ -0.73
PTCH1-201ENST00000331920 DMAC1Q96GE9 116 aa10.45□□□□□ -0.74
PTCH1-201ENST00000331920 PRR34Q9NV39 138 aa10.43□□□□□ -0.74
PTCH1-201ENST00000331920 USP9YO00507 2555 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-201ENST00000331920 Q75L30 129 aa10.4□□□□□ -0.74
PTCH1-201ENST00000331920 PLAC4Q8WY50 150 aa10.4□□□□□ -0.74
PTCH1-201ENST00000331920 FAM229BQ4G0N7 80 aa10.4□□□□□ -0.75
PTCH1-201ENST00000331920 PRRC2CQ9Y520 2896 aaKnown RBP10.38□□□□□ -0.75
PTCH1-201ENST00000331920 GIG44P09565 113 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-201ENST00000331920 GOLGB1Q14789 3259 aaKnown RBP10.34□□□□□ -0.75
PTCH1-201ENST00000331920 OCR1Q9BZK8 76 aa10.32□□□□□ -0.76
PTCH1-201ENST00000331920 C19orf73Q9NVV2 129 aa10.31□□□□□ -0.76
PTCH1-201ENST00000331920 TNP2Q05952 138 aa10.31□□□□□ -0.76
PTCH1-201ENST00000331920 Q8N9P0 234 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-201ENST00000331920 CNBPP62633 177 aaKnown RBP10.29□□□□□ -0.76
PTCH1-201ENST00000331920 FASNP49327 2511 aaKnown RBP10.29□□□□□ -0.76
PTCH1-201ENST00000331920 KRTAP10-3P60369 221 aa10.29□□□□□ -0.76
PTCH1-201ENST00000331920 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-201ENST00000331920 ZCCHC13Q8WW36 166 aaKnown RBP10.27□□□□□ -0.77
PTCH1-201ENST00000331920 ROMO1P60602 79 aa10.25□□□□□ -0.77
PTCH1-201ENST00000331920 M0QZ58 72 aa10.24□□□□□ -0.77
PTCH1-201ENST00000331920 LINC01558Q9Y6Z2 57 aa10.24□□□□□ -0.77
PTCH1-201ENST00000331920 C10orf142B7Z368 130 aa10.23□□□□□ -0.77
PTCH1-201ENST00000331920 Q5VSD8 79 aa10.19□□□□□ -0.78
PTCH1-201ENST00000331920 EPG5Q9HCE0 2579 aa10.18□□□□□ -0.78
PTCH1-201ENST00000331920 RPL37P61927 97 aaKnown RBP10.15□□□□□ -0.78
PTCH1-201ENST00000331920 Q5W150 140 aa10.14□□□□□ -0.79
PTCH1-201ENST00000331920 Q5VV11 94 aa10.13□□□□□ -0.79
PTCH1-201ENST00000331920 FP248Q71RG6 208 aaPredicted RBP10.12□□□□□ -0.79
PTCH1-201ENST00000331920 CEP350Q5VT06 3117 aa10.11□□□□□ -0.79
PTCH1-201ENST00000331920 C20orf166-AS1Q96NR2 134 aa10.11□□□□□ -0.79
PTCH1-201ENST00000331920 ADM2Q7Z4H4 148 aa10.11□□□□□ -0.79
PTCH1-201ENST00000331920 KRTAP16-1A8MUX0 517 aa10.1□□□□□ -0.79
PTCH1-201ENST00000331920 SEC61BP60468 96 aaKnown RBP10.09□□□□□ -0.79
PTCH1-201ENST00000331920 SPATA8Q6RVD6 105 aa10.09□□□□□ -0.79
PTCH1-201ENST00000331920 MMP24-AS1A0A0U1RRL7 71 aa10.07□□□□□ -0.8
PTCH1-201ENST00000331920 MGAM2Q2M2H8 2515 aa10.07□□□□□ -0.8
PTCH1-201ENST00000331920 Q5XG85 94 aa10.05□□□□□ -0.8
PTCH1-201ENST00000331920 UTRNP46939 3433 aa10.03□□□□□ -0.8
PTCH1-201ENST00000331920 KLK9Q2XQG4 91 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms