RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 BCE1O60756 84 aa10.11□□□□□ -0.79
BRCC3-201ENST00000330045 LINC01556Q5JQF7 62 aa10.1□□□□□ -0.79
BRCC3-201ENST00000330045 DPH3Q96FX2 82 aa10.1□□□□□ -0.79
BRCC3-201ENST00000330045 F8WDY8 70 aa10.09□□□□□ -0.79
BRCC3-201ENST00000330045 SYCNQ0VAF6 134 aa10.08□□□□□ -0.8
BRCC3-201ENST00000330045 C20orf197Q8N268 126 aa10.08□□□□□ -0.8
BRCC3-201ENST00000330045 TRAV7A0A075B6U4 112 aa10.08□□□□□ -0.8
BRCC3-201ENST00000330045 DEFB131BA0A096LNP1 70 aa10.08□□□□□ -0.8
BRCC3-201ENST00000330045 TRAV10A0A0B4J240 114 aa10.06□□□□□ -0.8
BRCC3-201ENST00000330045 FAM19A5Q7Z5A7 132 aaPredicted RBP10.06□□□□□ -0.8
BRCC3-201ENST00000330045 SCXQ7RTU7 201 aa10.05□□□□□ -0.8
BRCC3-201ENST00000330045 C11orf45Q8TAV5 145 aa10.05□□□□□ -0.8
BRCC3-201ENST00000330045 NKAPP1Q8N9T2 125 aa10.05□□□□□ -0.8
BRCC3-201ENST00000330045 MRAPQ8TCY5 172 aa10.04□□□□□ -0.8
BRCC3-201ENST00000330045 KCNQ1DNQ9H478 68 aa10.04□□□□□ -0.8
BRCC3-201ENST00000330045 COL7A1Q02388 2944 aa10.04□□□□□ -0.8
BRCC3-201ENST00000330045 DNHD1Q96M86 4753 aa10.04□□□□□ -0.8
BRCC3-201ENST00000330045 K7EIL1 84 aa10.02□□□□□ -0.8
BRCC3-201ENST00000330045 SERTAD4-AS1Q5TG53 156 aa10.02□□□□□ -0.8
BRCC3-201ENST00000330045 C7orf33Q8WU49 177 aa10.01□□□□□ -0.81
BRCC3-201ENST00000330045 DNAH10OSP0CZ25 163 aa10.01□□□□□ -0.81
BRCC3-201ENST00000330045 DNAH9Q9NYC9 4486 aa10□□□□□ -0.81
BRCC3-201ENST00000330045 DEFB105AQ8NG35 78 aa9.99□□□□□ -0.81
BRCC3-201ENST00000330045 OXTP01178 125 aa9.98□□□□□ -0.81
BRCC3-201ENST00000330045 TLX1NBP0CAT3 122 aa9.98□□□□□ -0.81
BRCC3-201ENST00000330045 Q8N377 158 aa9.98□□□□□ -0.81
BRCC3-201ENST00000330045 KLKP1Q107X0 134 aa9.97□□□□□ -0.81
BRCC3-201ENST00000330045 H7BZZ5 65 aa9.97□□□□□ -0.81
BRCC3-201ENST00000330045 NREPQ16612 68 aa9.97□□□□□ -0.81
BRCC3-201ENST00000330045 PLA2G2DQ9UNK4 145 aa9.97□□□□□ -0.81
BRCC3-201ENST00000330045 STAB2Q8WWQ8 2551 aa9.96□□□□□ -0.82
BRCC3-201ENST00000330045 FAM236DA0A1B0GTK5 79 aa9.95□□□□□ -0.82
BRCC3-201ENST00000330045 FAM236CP0DP71 79 aa9.95□□□□□ -0.82
BRCC3-201ENST00000330045 LYSTQ99698 3801 aa9.95□□□□□ -0.82
BRCC3-201ENST00000330045 TM2D3Q9BRN9 247 aa9.95□□□□□ -0.82
BRCC3-201ENST00000330045 RPL37AP8A6NKH3 93 aa9.95□□□□□ -0.82
BRCC3-201ENST00000330045 DHRS4-AS1Q9P1J3 65 aa9.95□□□□□ -0.82
BRCC3-201ENST00000330045 SNURFQ9Y675 71 aa9.95□□□□□ -0.82
BRCC3-201ENST00000330045 IGLV5-48A0A075B6I7 105 aa9.94□□□□□ -0.82
BRCC3-201ENST00000330045 C3orf84H3BNL1 204 aa9.94□□□□□ -0.82
BRCC3-201ENST00000330045 Q6ZRX8 168 aa9.94□□□□□ -0.82
BRCC3-201ENST00000330045 FAM168BA1KXE4 195 aa9.93□□□□□ -0.82
BRCC3-201ENST00000330045 Q8N9L7 120 aa9.93□□□□□ -0.82
BRCC3-201ENST00000330045 LINC00588Q9Y4M8 146 aa9.93□□□□□ -0.82
BRCC3-201ENST00000330045 IGLV1-50A0A075B6I6 118 aa9.93□□□□□ -0.82
BRCC3-201ENST00000330045 BPY2O14599 106 aa9.93□□□□□ -0.82
BRCC3-201ENST00000330045 RMI2Q96E14 147 aa9.93□□□□□ -0.82
BRCC3-201ENST00000330045 KRTAP4-16G5E9R7 235 aaPredicted RBP9.92□□□□□ -0.82
BRCC3-201ENST00000330045 PRYO14603 147 aa9.92□□□□□ -0.82
BRCC3-201ENST00000330045 CASC10Q5T4H9 136 aa9.92□□□□□ -0.82
BRCC3-201ENST00000330045 IGLV5-37A0A075B6J1 123 aa9.92□□□□□ -0.82
BRCC3-201ENST00000330045 IGKV4-1P06312 121 aa9.92□□□□□ -0.82
BRCC3-201ENST00000330045 Q9BRP9 147 aa9.92□□□□□ -0.82
BRCC3-201ENST00000330045 ETDCA0A1B0GVM5 59 aa9.91□□□□□ -0.82
BRCC3-201ENST00000330045 SPRR1AP35321 89 aa9.9□□□□□ -0.82
BRCC3-201ENST00000330045 PRKDCP78527 4128 aaKnown RBP9.89□□□□□ -0.83
BRCC3-201ENST00000330045 KRTAP7-1Q8IUC3 87 aa9.89□□□□□ -0.83
BRCC3-201ENST00000330045 F8WEM9 126 aa9.88□□□□□ -0.83
BRCC3-201ENST00000330045 FUSP35637 526 aaKnown RBP eCLIP9.88□□□□□ -0.83
BRCC3-201ENST00000330045 ST20-AS1Q8NBB2 130 aa9.87□□□□□ -0.83
BRCC3-201ENST00000330045 A0A1B0GW54 56 aa9.87□□□□□ -0.83
BRCC3-201ENST00000330045 NDUFC1O43677 76 aa9.86□□□□□ -0.83
BRCC3-201ENST00000330045 MRPL55Q7Z7F7 128 aaKnown RBP9.86□□□□□ -0.83
BRCC3-201ENST00000330045 SERP1Q9Y6X1 66 aa9.86□□□□□ -0.83
BRCC3-201ENST00000330045 A0A1W2PNM2 257 aa9.85□□□□□ -0.83
BRCC3-201ENST00000330045 TNP2Q05952 138 aa9.85□□□□□ -0.83
BRCC3-201ENST00000330045 C1orf137Q5JT78 98 aa9.85□□□□□ -0.83
BRCC3-201ENST00000330045 CSMD3Q7Z407 3707 aa9.85□□□□□ -0.83
BRCC3-201ENST00000330045 DNAH1Q9P2D7 4330 aa9.85□□□□□ -0.83
BRCC3-201ENST00000330045 ERC2-IT1O76042 136 aa9.84□□□□□ -0.83
BRCC3-201ENST00000330045 C5orf47Q569G3 176 aa9.84□□□□□ -0.83
BRCC3-201ENST00000330045 Q5XG85 94 aa9.84□□□□□ -0.83
BRCC3-201ENST00000330045 TMEM254Q8TBM7 123 aa9.84□□□□□ -0.83
BRCC3-201ENST00000330045 EPM2AB3EWF7 344 aa9.83□□□□□ -0.84
BRCC3-201ENST00000330045 MEGF8Q7Z7M0 2845 aa9.83□□□□□ -0.84
BRCC3-201ENST00000330045 OCR1Q9BZK8 76 aa9.83□□□□□ -0.84
BRCC3-201ENST00000330045 TENM2Q9NT68 2774 aa9.82□□□□□ -0.84
BRCC3-201ENST00000330045 UBE2BP63146 152 aa9.82□□□□□ -0.84
BRCC3-201ENST00000330045 C4orf26Q17RF5 130 aa9.82□□□□□ -0.84
BRCC3-201ENST00000330045 Q8NBF4 154 aa9.82□□□□□ -0.84
BRCC3-201ENST00000330045 DNAH7Q8WXX0 4024 aa9.8□□□□□ -0.84
BRCC3-201ENST00000330045 REG3GQ6UW15 175 aa9.79□□□□□ -0.84
BRCC3-201ENST00000330045 SPRR4Q96PI1 79 aa9.79□□□□□ -0.84
BRCC3-201ENST00000330045 PLECQ15149 4684 aaKnown RBP9.78□□□□□ -0.84
BRCC3-201ENST00000330045 DNAH10Q8IVF4 4471 aa9.78□□□□□ -0.84
BRCC3-201ENST00000330045 A0A0U1RQV1 116 aa9.76□□□□□ -0.85
BRCC3-201ENST00000330045 ATP5EP56381 51 aaPredicted RBP9.76□□□□□ -0.85
BRCC3-201ENST00000330045 HRCT1Q6UXD1 115 aa9.76□□□□□ -0.85
BRCC3-201ENST00000330045 SMIM29Q86T20 159 aa9.75□□□□□ -0.85
BRCC3-201ENST00000330045 DYNC2H1Q8NCM8 4307 aaKnown RBP9.74□□□□□ -0.85
BRCC3-201ENST00000330045 DSCR10P59022 87 aa9.73□□□□□ -0.85
BRCC3-201ENST00000330045 LINC00476Q8WZB0 136 aa9.73□□□□□ -0.85
BRCC3-201ENST00000330045 FAM30AQ9NZY2 134 aa9.73□□□□□ -0.85
BRCC3-201ENST00000330045 STARD9Q9P2P6 4700 aa9.72□□□□□ -0.85
BRCC3-201ENST00000330045 A0A096LNI7 61 aa9.72□□□□□ -0.85
BRCC3-201ENST00000330045 HIGD2AQ9BW72 106 aa9.72□□□□□ -0.85
BRCC3-201ENST00000330045 SMIM26A0A096LP01 95 aa9.71□□□□□ -0.86
BRCC3-201ENST00000330045 IGKV2-24A0A0C4DH68 120 aa9.71□□□□□ -0.86
BRCC3-201ENST00000330045 C16orf90A8MZG2 172 aa9.71□□□□□ -0.86
BRCC3-201ENST00000330045 B9D2Q9BPU9 175 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms