RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 SDIM1Q6ZPB5 146 aa11.97□□□□□ -0.49
EXOSC3-201ENST00000327304 NKAPP1Q8N9T2 125 aa11.97□□□□□ -0.49
EXOSC3-201ENST00000327304 DIRC1Q969H9 104 aa11.97□□□□□ -0.49
EXOSC3-201ENST00000327304 LINC00167Q96N53 147 aa11.97□□□□□ -0.49
EXOSC3-201ENST00000327304 TRBV7-6A0A0J9YX20 115 aa11.97□□□□□ -0.49
EXOSC3-201ENST00000327304 A0A096LNI7 61 aa11.96□□□□□ -0.49
EXOSC3-201ENST00000327304 SERTAD4-AS1Q5TG53 156 aa11.96□□□□□ -0.49
EXOSC3-201ENST00000327304 ZNF73O43830 326 aaPredicted RBP11.95□□□□□ -0.5
EXOSC3-201ENST00000327304 LINC00575Q6W349 94 aa11.95□□□□□ -0.5
EXOSC3-201ENST00000327304 IGKV2-24A0A0C4DH68 120 aa11.94□□□□□ -0.5
EXOSC3-201ENST00000327304 CHTF8P0CG12 524 aa11.94□□□□□ -0.5
EXOSC3-201ENST00000327304 TEX49A0A1B0GTD5 131 aa11.93□□□□□ -0.5
EXOSC3-201ENST00000327304 C16orf90A8MZG2 172 aa11.93□□□□□ -0.5
EXOSC3-201ENST00000327304 PKHD1P08F94 4074 aa11.93□□□□□ -0.5
EXOSC3-201ENST00000327304 ORMDL1Q9P0S3 153 aa11.93□□□□□ -0.5
EXOSC3-201ENST00000327304 C7orf33Q8WU49 177 aa11.92□□□□□ -0.5
EXOSC3-201ENST00000327304 VPS25Q9BRG1 176 aa11.92□□□□□ -0.5
EXOSC3-201ENST00000327304 PKIGQ9Y2B9 76 aa11.92□□□□□ -0.5
EXOSC3-201ENST00000327304 C22orf24Q9Y442 160 aa11.92□□□□□ -0.5
EXOSC3-201ENST00000327304 PANO1I0J062 215 aa11.91□□□□□ -0.5
EXOSC3-201ENST00000327304 KCNQ1DNQ9H478 68 aa11.91□□□□□ -0.5
EXOSC3-201ENST00000327304 DNAH8Q96JB1 4490 aa11.91□□□□□ -0.5
EXOSC3-201ENST00000327304 hADV29S1A0JD25 119 aa11.9□□□□□ -0.5
EXOSC3-201ENST00000327304 ELOF1P60002 83 aaKnown RBP11.9□□□□□ -0.5
EXOSC3-201ENST00000327304 COX7BP24311 80 aa11.9□□□□□ -0.5
EXOSC3-201ENST00000327304 FAM168BA1KXE4 195 aa11.89□□□□□ -0.51
EXOSC3-201ENST00000327304 KRTAP7-1Q8IUC3 87 aa11.89□□□□□ -0.51
EXOSC3-201ENST00000327304 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.89□□□□□ -0.51
EXOSC3-201ENST00000327304 KRTAP10-1P60331 282 aa11.88□□□□□ -0.51
EXOSC3-201ENST00000327304 DYNC1H1Q14204 4646 aaKnown RBP11.88□□□□□ -0.51
EXOSC3-201ENST00000327304 IGLV1-50A0A075B6I6 118 aa11.86□□□□□ -0.51
EXOSC3-201ENST00000327304 TMEM256-PLSCR3K7ERE1 68 aa11.86□□□□□ -0.51
EXOSC3-201ENST00000327304 SPACA4Q8TDM5 124 aa11.86□□□□□ -0.51
EXOSC3-201ENST00000327304 LRP1BQ9NZR2 4599 aa11.86□□□□□ -0.51
EXOSC3-201ENST00000327304 PRYO14603 147 aa11.86□□□□□ -0.51
EXOSC3-201ENST00000327304 FAM19A5Q7Z5A7 132 aaPredicted RBP11.86□□□□□ -0.51
EXOSC3-201ENST00000327304 MRPL55Q7Z7F7 128 aaKnown RBP11.86□□□□□ -0.51
EXOSC3-201ENST00000327304 A0A1W2PNN7 141 aa11.84□□□□□ -0.51
EXOSC3-201ENST00000327304 H3BQ85 93 aa11.84□□□□□ -0.51
EXOSC3-201ENST00000327304 LINC00528Q8N1L1 170 aa11.84□□□□□ -0.51
EXOSC3-201ENST00000327304 LINC00474Q9P2X8 69 aa11.84□□□□□ -0.51
EXOSC3-201ENST00000327304 INAFM2P0DMQ5 153 aa11.83□□□□□ -0.51
EXOSC3-201ENST00000327304 OBSCN-AS1Q96MR7 158 aa11.83□□□□□ -0.52
EXOSC3-201ENST00000327304 FAM30AQ9NZY2 134 aa11.83□□□□□ -0.52
EXOSC3-201ENST00000327304 SPRR1AP35321 89 aa11.82□□□□□ -0.52
EXOSC3-201ENST00000327304 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.81□□□□□ -0.52
EXOSC3-201ENST00000327304 DPH3Q96FX2 82 aa11.81□□□□□ -0.52
EXOSC3-201ENST00000327304 GHRHP01286 108 aa11.81□□□□□ -0.52
EXOSC3-201ENST00000327304 RPL37AP8A6NKH3 93 aa11.8□□□□□ -0.52
EXOSC3-201ENST00000327304 Q6ZQY7 126 aa11.79□□□□□ -0.52
EXOSC3-201ENST00000327304 Q6ZSA8 131 aa11.79□□□□□ -0.52
EXOSC3-201ENST00000327304 FAM240AA0A1B0GVK7 77 aa11.79□□□□□ -0.52
EXOSC3-201ENST00000327304 KRTAP4-16G5E9R7 235 aaPredicted RBP11.79□□□□□ -0.52
EXOSC3-201ENST00000327304 JMJD7-PLA2G4BH0Y9G9 81 aa11.78□□□□□ -0.52
EXOSC3-201ENST00000327304 CDIP1Q9H305 208 aa11.77□□□□□ -0.52
EXOSC3-201ENST00000327304 PLAC8Q9NZF1 115 aa11.76□□□□□ -0.53
EXOSC3-201ENST00000327304 B5MCH6 92 aa11.75□□□□□ -0.53
EXOSC3-201ENST00000327304 ACYP1P07311 99 aa11.75□□□□□ -0.53
EXOSC3-201ENST00000327304 Q6ZRX8 168 aa11.75□□□□□ -0.53
EXOSC3-201ENST00000327304 ETDCA0A1B0GVM5 59 aa11.74□□□□□ -0.53
EXOSC3-201ENST00000327304 EPM2AB3EWF7 344 aa11.74□□□□□ -0.53
EXOSC3-201ENST00000327304 HAMPP81172 84 aa11.74□□□□□ -0.53
EXOSC3-201ENST00000327304 DHRS4-AS1Q9P1J3 65 aa11.74□□□□□ -0.53
EXOSC3-201ENST00000327304 REG3GQ6UW15 175 aa11.73□□□□□ -0.53
EXOSC3-201ENST00000327304 PHF5AQ7RTV0 110 aaKnown RBP11.73□□□□□ -0.53
EXOSC3-201ENST00000327304 SCXQ7RTU7 201 aa11.72□□□□□ -0.53
EXOSC3-201ENST00000327304 CIRBP-AS1Q8TBR5 109 aa11.72□□□□□ -0.53
EXOSC3-201ENST00000327304 APOBP04114 4563 aaKnown RBP11.72□□□□□ -0.53
EXOSC3-201ENST00000327304 C14orf132Q9NPU4 83 aa11.72□□□□□ -0.53
EXOSC3-201ENST00000327304 EPPK1P58107 5090 aaKnown RBP11.71□□□□□ -0.54
EXOSC3-201ENST00000327304 SIGMAR1Q99720 223 aa11.7□□□□□ -0.54
EXOSC3-201ENST00000327304 Q9BRP9 147 aa11.68□□□□□ -0.54
EXOSC3-201ENST00000327304 LAMTOR3Q9UHA4 124 aa11.68□□□□□ -0.54
EXOSC3-201ENST00000327304 KRTAP11-1Q8IUC1 163 aa11.67□□□□□ -0.54
EXOSC3-201ENST00000327304 RBM3P98179 157 aaKnown RBP11.66□□□□□ -0.54
EXOSC3-201ENST00000327304 GAGE2AQ6NT46 116 aa11.66□□□□□ -0.54
EXOSC3-201ENST00000327304 CCKP06307 115 aa11.65□□□□□ -0.55
EXOSC3-201ENST00000327304 XGP55808 180 aa11.65□□□□□ -0.55
EXOSC3-201ENST00000327304 UBE2BP63146 152 aa11.65□□□□□ -0.55
EXOSC3-201ENST00000327304 LOC110117498A0A087WWA1 95 aa11.63□□□□□ -0.55
EXOSC3-201ENST00000327304 A0A1B0GV72 72 aa11.63□□□□□ -0.55
EXOSC3-201ENST00000327304 NDUFV3P56181 108 aaKnown RBP11.63□□□□□ -0.55
EXOSC3-201ENST00000327304 PDE6GP18545 87 aa11.61□□□□□ -0.55
EXOSC3-201ENST00000327304 LINC01547P58512 204 aaPredicted RBP11.6□□□□□ -0.55
EXOSC3-201ENST00000327304 FAM19A1Q7Z5A9 133 aa11.6□□□□□ -0.55
EXOSC3-201ENST00000327304 IGLV5-48A0A075B6I7 105 aa11.6□□□□□ -0.55
EXOSC3-201ENST00000327304 H0Y9J4 135 aa11.6□□□□□ -0.55
EXOSC3-201ENST00000327304 Q8N377 158 aa11.6□□□□□ -0.55
EXOSC3-201ENST00000327304 SMCR5Q8TEV8 140 aa11.6□□□□□ -0.55
EXOSC3-201ENST00000327304 DSCR8Q96T75 97 aa11.6□□□□□ -0.55
EXOSC3-201ENST00000327304 MT-ATP8P03928 68 aa11.59□□□□□ -0.55
EXOSC3-201ENST00000327304 Q6ZQT0 140 aa11.59□□□□□ -0.55
EXOSC3-201ENST00000327304 C21orf62-AS1Q17RA5 79 aa11.58□□□□□ -0.56
EXOSC3-201ENST00000327304 ERC2-IT1O76042 136 aa11.57□□□□□ -0.56
EXOSC3-201ENST00000327304 DEFB105AQ8NG35 78 aa11.57□□□□□ -0.56
EXOSC3-201ENST00000327304 TRBV7-4A0A0J9YYF1 115 aa11.56□□□□□ -0.56
EXOSC3-201ENST00000327304 PSORS1C2Q9UIG4 136 aa11.56□□□□□ -0.56
EXOSC3-201ENST00000327304 PRLHP81277 87 aa11.55□□□□□ -0.56
EXOSC3-201ENST00000327304 LINC00643Q86TS7 51 aa11.54□□□□□ -0.56
EXOSC3-201ENST00000327304 ST20-AS1Q8NBB2 130 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms