RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 OXLD1Q5BKU9 147 aa5.69□□□□□ -1.5
CLK1-201ENST00000321356 IGKV2D-24A0A075B6R9 120 aa5.68□□□□□ -1.5
CLK1-201ENST00000321356 SCXQ7RTU7 201 aa5.68□□□□□ -1.5
CLK1-201ENST00000321356 PLA2G2DQ9UNK4 145 aa5.68□□□□□ -1.5
CLK1-201ENST00000321356 ANK2Q01484 3957 aa5.68□□□□□ -1.5
CLK1-201ENST00000321356 EPM2AB3EWF7 344 aa5.67□□□□□ -1.5
CLK1-201ENST00000321356 TLX1NBP0CAT3 122 aa5.67□□□□□ -1.5
CLK1-201ENST00000321356 DNAH10OSP0CZ25 163 aa5.67□□□□□ -1.5
CLK1-201ENST00000321356 SERTAD4-AS1Q5TG53 156 aa5.67□□□□□ -1.5
CLK1-201ENST00000321356 C7orf33Q8WU49 177 aa5.67□□□□□ -1.5
CLK1-201ENST00000321356 DNAH1Q9P2D7 4330 aa5.67□□□□□ -1.5
CLK1-201ENST00000321356 DEFB131BA0A096LNP1 70 aa5.66□□□□□ -1.5
CLK1-201ENST00000321356 FAM236DA0A1B0GTK5 79 aa5.66□□□□□ -1.5
CLK1-201ENST00000321356 FAM236CP0DP71 79 aa5.66□□□□□ -1.5
CLK1-201ENST00000321356 NKAPP1Q8N9T2 125 aa5.66□□□□□ -1.5
CLK1-201ENST00000321356 DNAH3Q8TD57 4116 aa5.66□□□□□ -1.5
CLK1-201ENST00000321356 CMYA5Q8N3K9 4069 aa5.66□□□□□ -1.5
CLK1-201ENST00000321356 IGLV5-48A0A075B6I7 105 aa5.66□□□□□ -1.5
CLK1-201ENST00000321356 LCE2CQ5TA81 110 aa5.66□□□□□ -1.5
CLK1-201ENST00000321356 Q8N377 158 aa5.66□□□□□ -1.5
CLK1-201ENST00000321356 IGLV5-37A0A075B6J1 123 aa5.65□□□□□ -1.5
CLK1-201ENST00000321356 KRTAP4-16G5E9R7 235 aaPredicted RBP5.65□□□□□ -1.5
CLK1-201ENST00000321356 IGKV4-1P06312 121 aa5.65□□□□□ -1.5
CLK1-201ENST00000321356 TM2D3Q9BRN9 247 aa5.65□□□□□ -1.5
CLK1-201ENST00000321356 C11orf45Q8TAV5 145 aa5.64□□□□□ -1.51
CLK1-201ENST00000321356 SPRR1AP35321 89 aa5.64□□□□□ -1.51
CLK1-201ENST00000321356 Q5XG85 94 aa5.64□□□□□ -1.51
CLK1-201ENST00000321356 Q6ZRX8 168 aa5.64□□□□□ -1.51
CLK1-201ENST00000321356 DHRS4-AS1Q9P1J3 65 aa5.64□□□□□ -1.51
CLK1-201ENST00000321356 SNURFQ9Y675 71 aa5.64□□□□□ -1.51
CLK1-201ENST00000321356 STAB1Q9NY15 2570 aa5.63□□□□□ -1.51
CLK1-201ENST00000321356 FLNBO75369 2602 aaKnown RBP5.63□□□□□ -1.51
CLK1-201ENST00000321356 A0A1B0GW54 56 aa5.63□□□□□ -1.51
CLK1-201ENST00000321356 BPY2O14599 106 aa5.63□□□□□ -1.51
CLK1-201ENST00000321356 PRYO14603 147 aa5.63□□□□□ -1.51
CLK1-201ENST00000321356 ERC2-IT1O76042 136 aa5.63□□□□□ -1.51
CLK1-201ENST00000321356 NREPQ16612 68 aa5.63□□□□□ -1.51
CLK1-201ENST00000321356 C5orf47Q569G3 176 aa5.63□□□□□ -1.51
CLK1-201ENST00000321356 RMI2Q96E14 147 aa5.63□□□□□ -1.51
CLK1-201ENST00000321356 MAST4O15021 2626 aa5.63□□□□□ -1.51
CLK1-201ENST00000321356 IGLV1-50A0A075B6I6 118 aa5.62□□□□□ -1.51
CLK1-201ENST00000321356 NDUFC1O43677 76 aa5.62□□□□□ -1.51
CLK1-201ENST00000321356 TNP2Q05952 138 aa5.62□□□□□ -1.51
CLK1-201ENST00000321356 Q9BRP9 147 aa5.62□□□□□ -1.51
CLK1-201ENST00000321356 SERP1Q9Y6X1 66 aa5.62□□□□□ -1.51
CLK1-201ENST00000321356 KRTAP7-1Q8IUC3 87 aa5.62□□□□□ -1.51
CLK1-201ENST00000321356 Q8N9L7 120 aa5.62□□□□□ -1.51
CLK1-201ENST00000321356 MRAPQ8TCY5 172 aa5.62□□□□□ -1.51
CLK1-201ENST00000321356 F8WEM9 126 aa5.61□□□□□ -1.51
CLK1-201ENST00000321356 C4orf48Q5BLP8 95 aa5.61□□□□□ -1.51
CLK1-201ENST00000321356 DEFB105AQ8NG35 78 aa5.61□□□□□ -1.51
CLK1-201ENST00000321356 OCR1Q9BZK8 76 aa5.61□□□□□ -1.51
CLK1-201ENST00000321356 A0A1W2PNM2 257 aa5.6□□□□□ -1.51
CLK1-201ENST00000321356 FAM168BA1KXE4 195 aa5.6□□□□□ -1.51
CLK1-201ENST00000321356 C3orf84H3BNL1 204 aa5.6□□□□□ -1.51
CLK1-201ENST00000321356 CASC10Q5T4H9 136 aa5.6□□□□□ -1.51
CLK1-201ENST00000321356 NOTCH1P46531 2555 aa5.6□□□□□ -1.51
CLK1-201ENST00000321356 RPL37AP8A6NKH3 93 aa5.6□□□□□ -1.51
CLK1-201ENST00000321356 TMEM254Q8TBM7 123 aa5.6□□□□□ -1.51
CLK1-201ENST00000321356 LINC00588Q9Y4M8 146 aa5.6□□□□□ -1.51
CLK1-201ENST00000321356 FBN1P35555 2871 aaKnown RBP5.59□□□□□ -1.51
CLK1-201ENST00000321356 ETDCA0A1B0GVM5 59 aa5.59□□□□□ -1.51
CLK1-201ENST00000321356 FUSP35637 526 aaKnown RBP eCLIP5.59□□□□□ -1.51
CLK1-201ENST00000321356 C4orf26Q17RF5 130 aa5.59□□□□□ -1.51
CLK1-201ENST00000321356 ATP5EP56381 51 aaPredicted RBP5.58□□□□□ -1.52
CLK1-201ENST00000321356 KRTAP24-1Q3LI83 254 aa5.58□□□□□ -1.52
CLK1-201ENST00000321356 F8P00451 2351 aa5.58□□□□□ -1.52
CLK1-201ENST00000321356 NBEAL1Q6ZS30 2694 aa5.58□□□□□ -1.52
CLK1-201ENST00000321356 C1orf137Q5JT78 98 aa5.58□□□□□ -1.52
CLK1-201ENST00000321356 ST20-AS1Q8NBB2 130 aa5.58□□□□□ -1.52
CLK1-201ENST00000321356 Q8NBF4 154 aa5.58□□□□□ -1.52
CLK1-201ENST00000321356 SPRR4Q96PI1 79 aa5.58□□□□□ -1.52
CLK1-201ENST00000321356 A0A0U1RQV1 116 aa5.57□□□□□ -1.52
CLK1-201ENST00000321356 MRPL55Q7Z7F7 128 aaKnown RBP5.57□□□□□ -1.52
CLK1-201ENST00000321356 BAHCC1Q9P281 2608 aa5.56□□□□□ -1.52
CLK1-201ENST00000321356 HUWE1Q7Z6Z7 4374 aaKnown RBP5.56□□□□□ -1.52
CLK1-201ENST00000321356 LORP23490 312 aaPredicted RBP5.55□□□□□ -1.52
CLK1-201ENST00000321356 HRCT1Q6UXD1 115 aa5.55□□□□□ -1.52
CLK1-201ENST00000321356 SMIM26A0A096LP01 95 aa5.54□□□□□ -1.52
CLK1-201ENST00000321356 LCE6AA0A183 80 aa5.54□□□□□ -1.52
CLK1-201ENST00000321356 SMIM29Q86T20 159 aa5.54□□□□□ -1.52
CLK1-201ENST00000321356 DSCR10P59022 87 aa5.53□□□□□ -1.52
CLK1-201ENST00000321356 UBE2BP63146 152 aa5.53□□□□□ -1.52
CLK1-201ENST00000321356 REG3GQ6UW15 175 aa5.53□□□□□ -1.52
CLK1-201ENST00000321356 FP248Q71RG6 208 aaPredicted RBP5.53□□□□□ -1.52
CLK1-201ENST00000321356 LINC00476Q8WZB0 136 aa5.51□□□□□ -1.53
CLK1-201ENST00000321356 DNAH10Q8IVF4 4471 aa5.51□□□□□ -1.53
CLK1-201ENST00000321356 HIGD2AQ9BW72 106 aa5.5□□□□□ -1.53
CLK1-201ENST00000321356 IGLV8-61A0A075B6I0 122 aa5.49□□□□□ -1.53
CLK1-201ENST00000321356 K7EQZ3 153 aa5.49□□□□□ -1.53
CLK1-201ENST00000321356 COL6A5A8TX70 2615 aa5.49□□□□□ -1.53
CLK1-201ENST00000321356 A0A096LNI7 61 aa5.49□□□□□ -1.53
CLK1-201ENST00000321356 C16orf90A8MZG2 172 aa5.49□□□□□ -1.53
CLK1-201ENST00000321356 CNBPP62633 177 aaKnown RBP5.49□□□□□ -1.53
CLK1-201ENST00000321356 IGFL1Q6UW32 110 aa5.49□□□□□ -1.53
CLK1-201ENST00000321356 FAM30AQ9NZY2 134 aa5.49□□□□□ -1.53
CLK1-201ENST00000321356 STAB2Q8WWQ8 2551 aa5.48□□□□□ -1.53
CLK1-201ENST00000321356 ZCCHC13Q8WW36 166 aaKnown RBP5.48□□□□□ -1.53
CLK1-201ENST00000321356 DNAH9Q9NYC9 4486 aa5.48□□□□□ -1.53
CLK1-201ENST00000321356 A0A1W2PNN7 141 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms