RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 A0A1B0GUV1 79 aa9.55□□□□□ -0.88
PABPC1-201ENST00000318607 TMEM254Q8TBM7 123 aa9.55□□□□□ -0.88
PABPC1-201ENST00000318607 CMC4P56277 68 aaPredicted RBP9.54□□□□□ -0.88
PABPC1-201ENST00000318607 SERP1Q9Y6X1 66 aa9.54□□□□□ -0.88
PABPC1-201ENST00000318607 FAM229BQ4G0N7 80 aa9.53□□□□□ -0.88
PABPC1-201ENST00000318607 Q6ZRU5 148 aa9.52□□□□□ -0.89
PABPC1-201ENST00000318607 FP248Q71RG6 208 aaPredicted RBP9.51□□□□□ -0.89
PABPC1-201ENST00000318607 NKAPP1Q8N9T2 125 aa9.51□□□□□ -0.89
PABPC1-201ENST00000318607 COX17Q14061 63 aa9.51□□□□□ -0.89
PABPC1-201ENST00000318607 PSPHP1O15172 72 aa9.5□□□□□ -0.89
PABPC1-201ENST00000318607 A0A096LNI7 61 aa9.5□□□□□ -0.89
PABPC1-201ENST00000318607 FUSP35637 526 aaKnown RBP eCLIP9.49□□□□□ -0.89
PABPC1-201ENST00000318607 TENM2Q9NT68 2774 aa9.49□□□□□ -0.89
PABPC1-201ENST00000318607 SMIM26A0A096LP01 95 aa9.48□□□□□ -0.89
PABPC1-201ENST00000318607 SPART-AS1P0CW21 52 aa9.48□□□□□ -0.89
PABPC1-201ENST00000318607 NDUFC2-KCTD14E9PQ53 114 aa9.47□□□□□ -0.89
PABPC1-201ENST00000318607 KRTAP10-3P60369 221 aa9.47□□□□□ -0.89
PABPC1-201ENST00000318607 SMIM29Q86T20 159 aa9.47□□□□□ -0.89
PABPC1-201ENST00000318607 IGLV6-57P01721 117 aa9.46□□□□□ -0.89
PABPC1-201ENST00000318607 LINC00167Q96N53 147 aa9.46□□□□□ -0.89
PABPC1-201ENST00000318607 ST20-AS1Q8NBB2 130 aa9.46□□□□□ -0.9
PABPC1-201ENST00000318607 KRTAP1-3Q8IUG1 177 aa9.46□□□□□ -0.9
PABPC1-201ENST00000318607 WFDC13Q8IUB5 93 aa9.45□□□□□ -0.9
PABPC1-201ENST00000318607 COL7A1Q02388 2944 aa9.45□□□□□ -0.9
PABPC1-201ENST00000318607 A0A0J9YWU9 116 aa9.45□□□□□ -0.9
PABPC1-201ENST00000318607 UBE2BP63146 152 aa9.45□□□□□ -0.9
PABPC1-201ENST00000318607 KMT2BQ9UMN6 2715 aaPredicted RBP9.44□□□□□ -0.9
PABPC1-201ENST00000318607 FAM168BA1KXE4 195 aa9.44□□□□□ -0.9
PABPC1-201ENST00000318607 LOC110117498A0A087WWA1 95 aa9.43□□□□□ -0.9
PABPC1-201ENST00000318607 KLKP1Q107X0 134 aa9.43□□□□□ -0.9
PABPC1-201ENST00000318607 PRYO14603 147 aa9.42□□□□□ -0.9
PABPC1-201ENST00000318607 KPRPQ5T749 579 aaPredicted RBP9.42□□□□□ -0.9
PABPC1-201ENST00000318607 LELP1Q5T871 98 aa9.42□□□□□ -0.9
PABPC1-201ENST00000318607 Q6ZRP5 223 aa9.42□□□□□ -0.9
PABPC1-201ENST00000318607 CD164Q04900 197 aa9.41□□□□□ -0.9
PABPC1-201ENST00000318607 LYRM9A8MSI8 78 aa9.41□□□□□ -0.9
PABPC1-201ENST00000318607 Q6ZTC4 211 aa9.41□□□□□ -0.9
PABPC1-201ENST00000318607 IGKV2-24A0A0C4DH68 120 aa9.4□□□□□ -0.9
PABPC1-201ENST00000318607 PDE6GP18545 87 aa9.4□□□□□ -0.9
PABPC1-201ENST00000318607 APOC4P55056 127 aa9.4□□□□□ -0.9
PABPC1-201ENST00000318607 CXCL6P80162 114 aa9.4□□□□□ -0.9
PABPC1-201ENST00000318607 INAFM1C9JVW0 142 aa9.39□□□□□ -0.91
PABPC1-201ENST00000318607 STAB2Q8WWQ8 2551 aa9.39□□□□□ -0.91
PABPC1-201ENST00000318607 ETDCA0A1B0GVM5 59 aa9.39□□□□□ -0.91
PABPC1-201ENST00000318607 IGHV4-30-4P0DP06 118 aa9.39□□□□□ -0.91
PABPC1-201ENST00000318607 SERTAD4-AS1Q5TG53 156 aa9.39□□□□□ -0.91
PABPC1-201ENST00000318607 VPREB1P12018 145 aa9.39□□□□□ -0.91
PABPC1-201ENST00000318607 ELOF1P60002 83 aaKnown RBP9.39□□□□□ -0.91
PABPC1-201ENST00000318607 TRBV7-4A0A0J9YYF1 115 aa9.38□□□□□ -0.91
PABPC1-201ENST00000318607 M0R378 163 aa9.38□□□□□ -0.91
PABPC1-201ENST00000318607 IGKV4-1P06312 121 aa9.37□□□□□ -0.91
PABPC1-201ENST00000318607 SYCNQ0VAF6 134 aa9.36□□□□□ -0.91
PABPC1-201ENST00000318607 C1orf137Q5JT78 98 aa9.35□□□□□ -0.91
PABPC1-201ENST00000318607 C7orf33Q8WU49 177 aa9.35□□□□□ -0.91
PABPC1-201ENST00000318607 RPL37AP61513 92 aaKnown RBP9.33□□□□□ -0.92
PABPC1-201ENST00000318607 ESRGQ1W209 222 aa9.33□□□□□ -0.92
PABPC1-201ENST00000318607 LINC00612Q8N6U2 182 aa9.33□□□□□ -0.92
PABPC1-201ENST00000318607 Q8NAQ8 132 aa9.33□□□□□ -0.92
PABPC1-201ENST00000318607 C9orf66Q5T8R8 295 aa9.33□□□□□ -0.92
PABPC1-201ENST00000318607 Q8N377 158 aa9.33□□□□□ -0.92
PABPC1-201ENST00000318607 RBM12B-AS1Q9P1G2 102 aa9.33□□□□□ -0.92
PABPC1-201ENST00000318607 K7EQZ3 153 aa9.32□□□□□ -0.92
PABPC1-201ENST00000318607 LINC00528Q8N1L1 170 aa9.32□□□□□ -0.92
PABPC1-201ENST00000318607 C16orf95Q9H693 158 aa9.32□□□□□ -0.92
PABPC1-201ENST00000318607 J3QKU1 62 aa9.32□□□□□ -0.92
PABPC1-201ENST00000318607 CASC10Q5T4H9 136 aa9.32□□□□□ -0.92
PABPC1-201ENST00000318607 ERC2-IT1O76042 136 aa9.31□□□□□ -0.92
PABPC1-201ENST00000318607 KRTAP1-1Q07627 177 aa9.3□□□□□ -0.92
PABPC1-201ENST00000318607 EPM2AB3EWF7 344 aa9.3□□□□□ -0.92
PABPC1-201ENST00000318607 NDUFC1O43677 76 aa9.3□□□□□ -0.92
PABPC1-201ENST00000318607 PRLHP81277 87 aa9.3□□□□□ -0.92
PABPC1-201ENST00000318607 EGFEM1PQ0D2K5 195 aa9.29□□□□□ -0.92
PABPC1-201ENST00000318607 C15orf56Q8N910 161 aa9.29□□□□□ -0.92
PABPC1-201ENST00000318607 SPTSSBQ8NFR3 76 aa9.29□□□□□ -0.92
PABPC1-201ENST00000318607 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.28□□□□□ -0.92
PABPC1-201ENST00000318607 A0A1W2PNM2 257 aa9.28□□□□□ -0.92
PABPC1-201ENST00000318607 LINC00208Q96KT6 92 aa9.28□□□□□ -0.92
PABPC1-201ENST00000318607 OCR1Q9BZK8 76 aa9.28□□□□□ -0.92
PABPC1-201ENST00000318607 MDFIQ99750 246 aa9.27□□□□□ -0.93
PABPC1-201ENST00000318607 PRR34Q9NV39 138 aa9.27□□□□□ -0.93
PABPC1-201ENST00000318607 C1orf64Q8NEQ6 169 aa9.26□□□□□ -0.93
PABPC1-201ENST00000318607 A0A087WSZ3 146 aa9.26□□□□□ -0.93
PABPC1-201ENST00000318607 DEFB131BA0A096LNP1 70 aa9.26□□□□□ -0.93
PABPC1-201ENST00000318607 A8MU10 97 aa9.25□□□□□ -0.93
PABPC1-201ENST00000318607 A8MUN3 132 aa9.22□□□□□ -0.93
PABPC1-201ENST00000318607 Q9BRP9 147 aa9.22□□□□□ -0.93
PABPC1-201ENST00000318607 PSCAO43653 123 aa9.2□□□□□ -0.94
PABPC1-201ENST00000318607 H0Y9J4 135 aa9.19□□□□□ -0.94
PABPC1-201ENST00000318607 ANK2Q01484 3957 aa9.18□□□□□ -0.94
PABPC1-201ENST00000318607 DNAH3Q8TD57 4116 aa9.17□□□□□ -0.94
PABPC1-201ENST00000318607 PCOTHQ58A44 107 aa9.17□□□□□ -0.94
PABPC1-201ENST00000318607 GVQW2A0A096LPI5 108 aaPredicted RBP9.17□□□□□ -0.94
PABPC1-201ENST00000318607 Q6ZRX8 168 aa9.17□□□□□ -0.94
PABPC1-201ENST00000318607 PRR26Q8N8Z3 221 aa9.17□□□□□ -0.94
PABPC1-201ENST00000318607 DSCR10P59022 87 aa9.16□□□□□ -0.94
PABPC1-201ENST00000318607 LINC00476Q8WZB0 136 aa9.16□□□□□ -0.94
PABPC1-201ENST00000318607 H3BQ85 93 aa9.16□□□□□ -0.94
PABPC1-201ENST00000318607 CHKB-CPT1BH3BT56 60 aa9.16□□□□□ -0.94
PABPC1-201ENST00000318607 BCE1O60756 84 aa9.16□□□□□ -0.94
PABPC1-201ENST00000318607 ATP5EP56381 51 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms