RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 TLX1NBP0CAT3 122 aa8.46□□□□□ -1.05
SH3PXD2A-201ENST00000315994 FLNBO75369 2602 aaKnown RBP8.46□□□□□ -1.06
SH3PXD2A-201ENST00000315994 BRCA2P51587 3418 aa8.45□□□□□ -1.06
SH3PXD2A-201ENST00000315994 APLNQ9ULZ1 77 aa8.45□□□□□ -1.06
SH3PXD2A-201ENST00000315994 LINC00528Q8N1L1 170 aa8.44□□□□□ -1.06
SH3PXD2A-201ENST00000315994 ZNF292O60281 2723 aa8.44□□□□□ -1.06
SH3PXD2A-201ENST00000315994 ATP11AUNQ6ZP68 121 aa8.44□□□□□ -1.06
SH3PXD2A-201ENST00000315994 C9orf129Q5T035 196 aaKnown RBP8.44□□□□□ -1.06
SH3PXD2A-201ENST00000315994 PLA2G2DQ9UNK4 145 aa8.44□□□□□ -1.06
SH3PXD2A-201ENST00000315994 FLNAP21333 2647 aaKnown RBP8.43□□□□□ -1.06
SH3PXD2A-201ENST00000315994 TP53AIP1Q9HCN2 124 aa8.43□□□□□ -1.06
SH3PXD2A-201ENST00000315994 TRBV7-4A0A0J9YYF1 115 aa8.43□□□□□ -1.06
SH3PXD2A-201ENST00000315994 A0A087WTM6 91 aa8.42□□□□□ -1.06
SH3PXD2A-201ENST00000315994 C7orf65Q6ZTY9 151 aa8.42□□□□□ -1.06
SH3PXD2A-201ENST00000315994 C1orf64Q8NEQ6 169 aa8.41□□□□□ -1.06
SH3PXD2A-201ENST00000315994 CR1P17927 2039 aa8.41□□□□□ -1.06
SH3PXD2A-201ENST00000315994 C9orf163Q8N9P6 203 aa8.41□□□□□ -1.06
SH3PXD2A-201ENST00000315994 LINC00313P59037 77 aa8.4□□□□□ -1.06
SH3PXD2A-201ENST00000315994 COX6B2Q6YFQ2 88 aa8.4□□□□□ -1.06
SH3PXD2A-201ENST00000315994 ITPR3Q14573 2671 aa8.38□□□□□ -1.07
SH3PXD2A-201ENST00000315994 CNBPP62633 177 aaKnown RBP8.37□□□□□ -1.07
SH3PXD2A-201ENST00000315994 HELZ2Q9BYK8 2649 aaKnown RBP8.37□□□□□ -1.07
SH3PXD2A-201ENST00000315994 Q96NJ1 140 aa8.35□□□□□ -1.07
SH3PXD2A-201ENST00000315994 CASC10Q5T4H9 136 aa8.35□□□□□ -1.07
SH3PXD2A-201ENST00000315994 LINC01600Q96MT4 127 aa8.35□□□□□ -1.07
SH3PXD2A-201ENST00000315994 KLKP1Q107X0 134 aa8.35□□□□□ -1.07
SH3PXD2A-201ENST00000315994 SPAG11AQ6PDA7 123 aa8.34□□□□□ -1.07
SH3PXD2A-201ENST00000315994 ZNF861PO60384 105 aa8.34□□□□□ -1.08
SH3PXD2A-201ENST00000315994 H7BZZ5 65 aa8.33□□□□□ -1.08
SH3PXD2A-201ENST00000315994 LINC00304Q8N9R0 145 aa8.33□□□□□ -1.08
SH3PXD2A-201ENST00000315994 H3BPC8 53 aa8.33□□□□□ -1.08
SH3PXD2A-201ENST00000315994 A8MWP4 228 aa8.32□□□□□ -1.08
SH3PXD2A-201ENST00000315994 IGFL1Q6UW32 110 aa8.32□□□□□ -1.08
SH3PXD2A-201ENST00000315994 Q8N377 158 aa8.31□□□□□ -1.08
SH3PXD2A-201ENST00000315994 CD164Q04900 197 aa8.31□□□□□ -1.08
SH3PXD2A-201ENST00000315994 C8orf87E5RJ46 101 aa8.31□□□□□ -1.08
SH3PXD2A-201ENST00000315994 SMR3BP02814 79 aaPredicted RBP8.31□□□□□ -1.08
SH3PXD2A-201ENST00000315994 A0A1W2PNN7 141 aa8.3□□□□□ -1.08
SH3PXD2A-201ENST00000315994 MGAQ8IWI9 3026 aa8.3□□□□□ -1.08
SH3PXD2A-201ENST00000315994 ERC2-IT1O76042 136 aa8.3□□□□□ -1.08
SH3PXD2A-201ENST00000315994 FAM104AQ969W3 186 aa8.29□□□□□ -1.08
SH3PXD2A-201ENST00000315994 CFAP46Q8IYW2 2715 aa8.29□□□□□ -1.08
SH3PXD2A-201ENST00000315994 IGLV5-37A0A075B6J1 123 aa8.28□□□□□ -1.08
SH3PXD2A-201ENST00000315994 TRAV22A0A0B4J277 110 aa8.28□□□□□ -1.08
SH3PXD2A-201ENST00000315994 PRUNE2Q8WUY3 3088 aa8.28□□□□□ -1.08
SH3PXD2A-201ENST00000315994 ACYP2P14621 99 aa8.28□□□□□ -1.08
SH3PXD2A-201ENST00000315994 SSBP3-AS1Q7Z2R9 100 aa8.28□□□□□ -1.08
SH3PXD2A-201ENST00000315994 K7EQZ3 153 aa8.27□□□□□ -1.09
SH3PXD2A-201ENST00000315994 AKAP13Q12802 2813 aa8.27□□□□□ -1.09
SH3PXD2A-201ENST00000315994 USP24Q9UPU5 2620 aa8.27□□□□□ -1.09
SH3PXD2A-201ENST00000315994 Q5XG85 94 aa8.25□□□□□ -1.09
SH3PXD2A-201ENST00000315994 IGLV7-43P04211 117 aa8.25□□□□□ -1.09
SH3PXD2A-201ENST00000315994 CDH23Q9H251 3354 aa8.24□□□□□ -1.09
SH3PXD2A-201ENST00000315994 PSORS1C2Q9UIG4 136 aa8.24□□□□□ -1.09
SH3PXD2A-201ENST00000315994 UNC80Q8N2C7 3258 aa8.24□□□□□ -1.09
SH3PXD2A-201ENST00000315994 MRPL34Q9BQ48 92 aaKnown RBP8.23□□□□□ -1.09
SH3PXD2A-201ENST00000315994 A8MUN3 132 aa8.21□□□□□ -1.09
SH3PXD2A-201ENST00000315994 SPRR4Q96PI1 79 aa8.21□□□□□ -1.1
SH3PXD2A-201ENST00000315994 ATRQ13535 2644 aa8.2□□□□□ -1.1
SH3PXD2A-201ENST00000315994 LOC101927531A0A1B0GV80 90 aa8.2□□□□□ -1.1
SH3PXD2A-201ENST00000315994 MGAM2Q2M2H8 2515 aa8.2□□□□□ -1.1
SH3PXD2A-201ENST00000315994 A0A1B0GU69 56 aa8.2□□□□□ -1.1
SH3PXD2A-201ENST00000315994 PRR15Q8IV56 129 aa8.2□□□□□ -1.1
SH3PXD2A-201ENST00000315994 C8orf17Q9NRJ1 99 aa8.18□□□□□ -1.1
SH3PXD2A-201ENST00000315994 CENPEQ02224 2701 aa8.17□□□□□ -1.1
SH3PXD2A-201ENST00000315994 A0A1B0GVX0 72 aa8.16□□□□□ -1.1
SH3PXD2A-201ENST00000315994 A0A0G2JQZ4 141 aa8.16□□□□□ -1.1
SH3PXD2A-201ENST00000315994 LAMA2P24043 3122 aaKnown RBP8.16□□□□□ -1.1
SH3PXD2A-201ENST00000315994 KTN1-AS1Q86SY8 53 aa8.16□□□□□ -1.1
SH3PXD2A-201ENST00000315994 WDFY4Q6ZS81 3184 aa8.16□□□□□ -1.1
SH3PXD2A-201ENST00000315994 C9orf92A6NGG3 77 aa8.16□□□□□ -1.1
SH3PXD2A-201ENST00000315994 ANAPC11Q9NYG5 84 aa8.16□□□□□ -1.1
SH3PXD2A-201ENST00000315994 TNP2Q05952 138 aa8.15□□□□□ -1.1
SH3PXD2A-201ENST00000315994 CYP4F30PQ9H0H9 118 aa8.15□□□□□ -1.1
SH3PXD2A-201ENST00000315994 CYSTM1Q9H1C7 97 aa8.15□□□□□ -1.1
SH3PXD2A-201ENST00000315994 RBM12B-AS1Q9P1G2 102 aa8.14□□□□□ -1.11
SH3PXD2A-201ENST00000315994 IGLV5-48A0A075B6I7 105 aa8.14□□□□□ -1.11
SH3PXD2A-201ENST00000315994 A0A1W2PNM2 257 aa8.14□□□□□ -1.11
SH3PXD2A-201ENST00000315994 DSCR10P59022 87 aa8.14□□□□□ -1.11
SH3PXD2A-201ENST00000315994 OBSCN-AS1Q96MR7 158 aa8.13□□□□□ -1.11
SH3PXD2A-201ENST00000315994 MAST4O15021 2626 aa8.13□□□□□ -1.11
SH3PXD2A-201ENST00000315994 CFAP54Q96N23 3096 aa8.12□□□□□ -1.11
SH3PXD2A-201ENST00000315994 IGSF10Q6WRI0 2623 aa8.11□□□□□ -1.11
SH3PXD2A-201ENST00000315994 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.09□□□□□ -1.11
SH3PXD2A-201ENST00000315994 TRIOO75962 3097 aa8.09□□□□□ -1.11
SH3PXD2A-201ENST00000315994 SZT2Q5T011 3432 aa8.09□□□□□ -1.11
SH3PXD2A-201ENST00000315994 XIRP2A4UGR9 3374 aa8.08□□□□□ -1.12
SH3PXD2A-201ENST00000315994 DSPP15924 2871 aaKnown RBP8.08□□□□□ -1.12
SH3PXD2A-201ENST00000315994 OXTP01178 125 aa8.08□□□□□ -1.12
SH3PXD2A-201ENST00000315994 A0A0C4DFX4 3053 aa8.08□□□□□ -1.12
SH3PXD2A-201ENST00000315994 FP248Q71RG6 208 aaPredicted RBP8.07□□□□□ -1.12
SH3PXD2A-201ENST00000315994 Q1T7F1 81 aa8.04□□□□□ -1.12
SH3PXD2A-201ENST00000315994 LCA10Q71F78 164 aa8.04□□□□□ -1.12
SH3PXD2A-201ENST00000315994 PLAC8Q9NZF1 115 aa8.03□□□□□ -1.12
SH3PXD2A-201ENST00000315994 COA5Q86WW8 74 aa8.02□□□□□ -1.12
SH3PXD2A-201ENST00000315994 Q8NDZ9 215 aa8.01□□□□□ -1.13
SH3PXD2A-201ENST00000315994 UNC79Q9P2D8 2635 aa8.01□□□□□ -1.13
SH3PXD2A-201ENST00000315994 SPRR1AP35321 89 aa8.01□□□□□ -1.13
SH3PXD2A-201ENST00000315994 KRTAP26-1Q6PEX3 210 aa8□□□□□ -1.13
SH3PXD2A-201ENST00000315994 Q6ZSA8 131 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 239.3 ms