RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 SPART-AS1P0CW21 52 aa9.7□□□□□ -0.86
COL6A2-202ENST00000310645 WFDC10BQ8IUB3 73 aa9.69□□□□□ -0.86
COL6A2-202ENST00000310645 SMIM29Q86T20 159 aa9.68□□□□□ -0.86
COL6A2-202ENST00000310645 ESRGQ1W209 222 aa9.68□□□□□ -0.86
COL6A2-202ENST00000310645 ERC2-IT1O76042 136 aa9.67□□□□□ -0.86
COL6A2-202ENST00000310645 APOC4P55056 127 aa9.67□□□□□ -0.86
COL6A2-202ENST00000310645 Q8NAQ8 132 aa9.67□□□□□ -0.86
COL6A2-202ENST00000310645 EGFEM1PQ0D2K5 195 aa9.66□□□□□ -0.86
COL6A2-202ENST00000310645 Q6ZRP5 223 aa9.66□□□□□ -0.86
COL6A2-202ENST00000310645 ATRQ13535 2644 aa9.65□□□□□ -0.86
COL6A2-202ENST00000310645 HIVEP1P15822 2718 aa9.65□□□□□ -0.86
COL6A2-202ENST00000310645 PRB2P02812 416 aaPredicted RBP9.65□□□□□ -0.86
COL6A2-202ENST00000310645 NKAPP1Q8N9T2 125 aa9.65□□□□□ -0.86
COL6A2-202ENST00000310645 KRTAP1-1Q07627 177 aa9.65□□□□□ -0.87
COL6A2-202ENST00000310645 Q6ZTC4 211 aa9.65□□□□□ -0.87
COL6A2-202ENST00000310645 SMR3AQ99954 134 aa9.65□□□□□ -0.87
COL6A2-202ENST00000310645 TENM4Q6N022 2769 aa9.64□□□□□ -0.87
COL6A2-202ENST00000310645 PKD1L1Q8TDX9 2849 aa9.64□□□□□ -0.87
COL6A2-202ENST00000310645 KPRPQ5T749 579 aaPredicted RBP9.64□□□□□ -0.87
COL6A2-202ENST00000310645 Q8N377 158 aa9.64□□□□□ -0.87
COL6A2-202ENST00000310645 PRR4Q16378 134 aa9.64□□□□□ -0.87
COL6A2-202ENST00000310645 TEP1Q99973 2627 aaKnown RBP9.64□□□□□ -0.87
COL6A2-202ENST00000310645 RPL37AP8A6NKH3 93 aa9.63□□□□□ -0.87
COL6A2-202ENST00000310645 IGKV2D-24A0A075B6R9 120 aa9.62□□□□□ -0.87
COL6A2-202ENST00000310645 C15orf56Q8N910 161 aa9.62□□□□□ -0.87
COL6A2-202ENST00000310645 C1orf195Q5TG92 126 aa9.61□□□□□ -0.87
COL6A2-202ENST00000310645 TENM1Q9UKZ4 2725 aa9.61□□□□□ -0.87
COL6A2-202ENST00000310645 SERTAD4-AS1Q5TG53 156 aa9.6□□□□□ -0.87
COL6A2-202ENST00000310645 C7orf33Q8WU49 177 aa9.59□□□□□ -0.87
COL6A2-202ENST00000310645 A0A1W2PNM2 257 aa9.59□□□□□ -0.87
COL6A2-202ENST00000310645 ST20-AS1Q8NBB2 130 aa9.59□□□□□ -0.87
COL6A2-202ENST00000310645 C1orf137Q5JT78 98 aa9.58□□□□□ -0.88
COL6A2-202ENST00000310645 SYCNQ0VAF6 134 aa9.57□□□□□ -0.88
COL6A2-202ENST00000310645 ANK3Q12955 4377 aaKnown RBP9.57□□□□□ -0.88
COL6A2-202ENST00000310645 KRTAP26-1Q6PEX3 210 aa9.56□□□□□ -0.88
COL6A2-202ENST00000310645 RETNQ9HD89 108 aa9.56□□□□□ -0.88
COL6A2-202ENST00000310645 A0A0G2JQZ4 141 aa9.55□□□□□ -0.88
COL6A2-202ENST00000310645 A0A1W2PNN7 141 aa9.55□□□□□ -0.88
COL6A2-202ENST00000310645 IGLV5-48A0A075B6I7 105 aa9.54□□□□□ -0.88
COL6A2-202ENST00000310645 PSPHP1O15172 72 aa9.54□□□□□ -0.88
COL6A2-202ENST00000310645 C1orf64Q8NEQ6 169 aa9.54□□□□□ -0.88
COL6A2-202ENST00000310645 ETDCA0A1B0GVM5 59 aa9.54□□□□□ -0.88
COL6A2-202ENST00000310645 FAM168BA1KXE4 195 aa9.54□□□□□ -0.88
COL6A2-202ENST00000310645 KCNQ1DNQ9H478 68 aa9.54□□□□□ -0.88
COL6A2-202ENST00000310645 K7EQZ3 153 aa9.54□□□□□ -0.88
COL6A2-202ENST00000310645 DEFB116Q30KQ4 102 aa9.54□□□□□ -0.88
COL6A2-202ENST00000310645 PDZD2O15018 2839 aa9.53□□□□□ -0.88
COL6A2-202ENST00000310645 hDV103S1A0JD37 113 aa9.53□□□□□ -0.88
COL6A2-202ENST00000310645 BAHCC1Q9P281 2608 aa9.53□□□□□ -0.88
COL6A2-202ENST00000310645 Q9BRP9 147 aa9.52□□□□□ -0.89
COL6A2-202ENST00000310645 V9GYY9 64 aa9.52□□□□□ -0.89
COL6A2-202ENST00000310645 TRRAPQ9Y4A5 3859 aa9.51□□□□□ -0.89
COL6A2-202ENST00000310645 DSCR10P59022 87 aa9.5□□□□□ -0.89
COL6A2-202ENST00000310645 Q6ZRX8 168 aa9.5□□□□□ -0.89
COL6A2-202ENST00000310645 UBE2BP63146 152 aa9.5□□□□□ -0.89
COL6A2-202ENST00000310645 Q8NBF4 154 aa9.5□□□□□ -0.89
COL6A2-202ENST00000310645 DHRS4-AS1Q9P1J3 65 aa9.5□□□□□ -0.89
COL6A2-202ENST00000310645 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.49□□□□□ -0.89
COL6A2-202ENST00000310645 WFDC13Q8IUB5 93 aa9.49□□□□□ -0.89
COL6A2-202ENST00000310645 TENM3Q9P273 2699 aa9.45□□□□□ -0.9
COL6A2-202ENST00000310645 HCG22E2RYF7 251 aa9.44□□□□□ -0.9
COL6A2-202ENST00000310645 PSCAO43653 123 aa9.43□□□□□ -0.9
COL6A2-202ENST00000310645 TNP2Q05952 138 aa9.43□□□□□ -0.9
COL6A2-202ENST00000310645 IGLV1-50A0A075B6I6 118 aa9.43□□□□□ -0.9
COL6A2-202ENST00000310645 ZCCHC13Q8WW36 166 aaKnown RBP9.43□□□□□ -0.9
COL6A2-202ENST00000310645 F8WDY8 70 aa9.42□□□□□ -0.9
COL6A2-202ENST00000310645 TRAV22A0A0B4J277 110 aa9.42□□□□□ -0.9
COL6A2-202ENST00000310645 LCE6AA0A183 80 aa9.42□□□□□ -0.9
COL6A2-202ENST00000310645 CASC10Q5T4H9 136 aa9.42□□□□□ -0.9
COL6A2-202ENST00000310645 SEC61GP60059 68 aa9.41□□□□□ -0.9
COL6A2-202ENST00000310645 LINC00476Q8WZB0 136 aa9.41□□□□□ -0.9
COL6A2-202ENST00000310645 SPRR4Q96PI1 79 aa9.41□□□□□ -0.9
COL6A2-202ENST00000310645 KRTAP4-16G5E9R7 235 aaPredicted RBP9.4□□□□□ -0.9
COL6A2-202ENST00000310645 Q1T7F1 81 aa9.4□□□□□ -0.9
COL6A2-202ENST00000310645 RPL37AP61513 92 aaKnown RBP9.4□□□□□ -0.9
COL6A2-202ENST00000310645 LINC00208Q96KT6 92 aa9.4□□□□□ -0.9
COL6A2-202ENST00000310645 A8MUN3 132 aa9.4□□□□□ -0.91
COL6A2-202ENST00000310645 A0A1B0GW54 56 aa9.39□□□□□ -0.91
COL6A2-202ENST00000310645 OXLD1Q5BKU9 147 aa9.39□□□□□ -0.91
COL6A2-202ENST00000310645 LINC01556Q5JQF7 62 aa9.39□□□□□ -0.91
COL6A2-202ENST00000310645 INAFM1C9JVW0 142 aa9.38□□□□□ -0.91
COL6A2-202ENST00000310645 OTOGQ6ZRI0 2925 aa9.38□□□□□ -0.91
COL6A2-202ENST00000310645 A0A087WSZ3 146 aa9.38□□□□□ -0.91
COL6A2-202ENST00000310645 DEFB131BA0A096LNP1 70 aa9.38□□□□□ -0.91
COL6A2-202ENST00000310645 KRTAP7-1Q8IUC3 87 aa9.38□□□□□ -0.91
COL6A2-202ENST00000310645 J3QKU1 62 aa9.37□□□□□ -0.91
COL6A2-202ENST00000310645 MP68P56378 58 aa9.37□□□□□ -0.91
COL6A2-202ENST00000310645 MRPL55Q7Z7F7 128 aaKnown RBP9.37□□□□□ -0.91
COL6A2-202ENST00000310645 NOTCH1P46531 2555 aa9.36□□□□□ -0.91
COL6A2-202ENST00000310645 H3BNG1 76 aa9.35□□□□□ -0.91
COL6A2-202ENST00000310645 SPRR1AP35321 89 aa9.35□□□□□ -0.91
COL6A2-202ENST00000310645 A8MU10 97 aa9.35□□□□□ -0.91
COL6A2-202ENST00000310645 IGFL1Q6UW32 110 aa9.35□□□□□ -0.91
COL6A2-202ENST00000310645 PRR15Q8IV56 129 aa9.35□□□□□ -0.91
COL6A2-202ENST00000310645 NSD1Q96L73 2696 aaPredicted RBP9.35□□□□□ -0.91
COL6A2-202ENST00000310645 PRLHP81277 87 aa9.35□□□□□ -0.91
COL6A2-202ENST00000310645 PMAIP1Q13794 54 aa9.34□□□□□ -0.91
COL6A2-202ENST00000310645 REG3GQ6UW15 175 aa9.33□□□□□ -0.92
COL6A2-202ENST00000310645 CYP4F30PQ9H0H9 118 aa9.33□□□□□ -0.92
COL6A2-202ENST00000310645 MAST4O15021 2626 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms