RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 LINC00474Q9P2X8 69 aa9.84□□□□□ -0.83
RUNX3-201ENST00000308873 PRR34Q9NV39 138 aa9.83□□□□□ -0.84
RUNX3-201ENST00000308873 NDUFC2-KCTD14E9PQ53 114 aa9.83□□□□□ -0.84
RUNX3-201ENST00000308873 SYCNQ0VAF6 134 aa9.83□□□□□ -0.84
RUNX3-201ENST00000308873 TENM3Q9P273 2699 aa9.83□□□□□ -0.84
RUNX3-201ENST00000308873 CXCL6P80162 114 aa9.82□□□□□ -0.84
RUNX3-201ENST00000308873 J3QKU1 62 aa9.82□□□□□ -0.84
RUNX3-201ENST00000308873 Q5XG85 94 aa9.82□□□□□ -0.84
RUNX3-201ENST00000308873 TMEM254Q8TBM7 123 aa9.82□□□□□ -0.84
RUNX3-201ENST00000308873 EGFEM1PQ0D2K5 195 aa9.82□□□□□ -0.84
RUNX3-201ENST00000308873 PRR4Q16378 134 aa9.82□□□□□ -0.84
RUNX3-201ENST00000308873 SERP1Q9Y6X1 66 aa9.82□□□□□ -0.84
RUNX3-201ENST00000308873 UBE2BP63146 152 aa9.81□□□□□ -0.84
RUNX3-201ENST00000308873 TRBV7-4A0A0J9YYF1 115 aa9.81□□□□□ -0.84
RUNX3-201ENST00000308873 ESRGQ1W209 222 aa9.81□□□□□ -0.84
RUNX3-201ENST00000308873 ETDCA0A1B0GVM5 59 aa9.81□□□□□ -0.84
RUNX3-201ENST00000308873 MRAPQ8TCY5 172 aa9.81□□□□□ -0.84
RUNX3-201ENST00000308873 FBN1P35555 2871 aaKnown RBP9.8□□□□□ -0.84
RUNX3-201ENST00000308873 FUSP35637 526 aaKnown RBP eCLIP9.8□□□□□ -0.84
RUNX3-201ENST00000308873 PKIGQ9Y2B9 76 aa9.79□□□□□ -0.84
RUNX3-201ENST00000308873 DEFB116Q30KQ4 102 aa9.79□□□□□ -0.84
RUNX3-201ENST00000308873 BRK1Q8WUW1 75 aa9.79□□□□□ -0.84
RUNX3-201ENST00000308873 HIGD2AQ9BW72 106 aa9.79□□□□□ -0.84
RUNX3-201ENST00000308873 SERTAD4-AS1Q5TG53 156 aa9.79□□□□□ -0.84
RUNX3-201ENST00000308873 TRBV7-6A0A0J9YX20 115 aa9.78□□□□□ -0.84
RUNX3-201ENST00000308873 DEFB131BA0A096LNP1 70 aa9.78□□□□□ -0.84
RUNX3-201ENST00000308873 A0A0G2JQZ4 141 aa9.78□□□□□ -0.84
RUNX3-201ENST00000308873 A0A0U1RQV1 116 aa9.78□□□□□ -0.84
RUNX3-201ENST00000308873 A0A1W2PNN7 141 aa9.78□□□□□ -0.84
RUNX3-201ENST00000308873 FAM168BA1KXE4 195 aa9.78□□□□□ -0.84
RUNX3-201ENST00000308873 C15orf56Q8N910 161 aa9.78□□□□□ -0.84
RUNX3-201ENST00000308873 ST20-AS1Q8NBB2 130 aa9.78□□□□□ -0.84
RUNX3-201ENST00000308873 LINC00528Q8N1L1 170 aa9.77□□□□□ -0.85
RUNX3-201ENST00000308873 C7orf33Q8WU49 177 aa9.77□□□□□ -0.85
RUNX3-201ENST00000308873 MGAM2Q2M2H8 2515 aa9.76□□□□□ -0.85
RUNX3-201ENST00000308873 KLKP1Q107X0 134 aa9.76□□□□□ -0.85
RUNX3-201ENST00000308873 H3BQ85 93 aa9.76□□□□□ -0.85
RUNX3-201ENST00000308873 LINC00336Q6ZUF6 198 aa9.76□□□□□ -0.85
RUNX3-201ENST00000308873 GVQW2A0A096LPI5 108 aaPredicted RBP9.76□□□□□ -0.85
RUNX3-201ENST00000308873 ANK3Q12955 4377 aaKnown RBP9.75□□□□□ -0.85
RUNX3-201ENST00000308873 IGKV2-24A0A0C4DH68 120 aa9.74□□□□□ -0.85
RUNX3-201ENST00000308873 SMIM29Q86T20 159 aa9.74□□□□□ -0.85
RUNX3-201ENST00000308873 SMIM26A0A096LP01 95 aa9.73□□□□□ -0.85
RUNX3-201ENST00000308873 C11orf45Q8TAV5 145 aa9.73□□□□□ -0.85
RUNX3-201ENST00000308873 C1orf137Q5JT78 98 aa9.72□□□□□ -0.85
RUNX3-201ENST00000308873 PRYO14603 147 aa9.71□□□□□ -0.85
RUNX3-201ENST00000308873 IGKV4-1P06312 121 aa9.71□□□□□ -0.85
RUNX3-201ENST00000308873 Q8N377 158 aa9.71□□□□□ -0.85
RUNX3-201ENST00000308873 A0A096LNI7 61 aa9.69□□□□□ -0.86
RUNX3-201ENST00000308873 CASC10Q5T4H9 136 aa9.69□□□□□ -0.86
RUNX3-201ENST00000308873 WFDC13Q8IUB5 93 aa9.68□□□□□ -0.86
RUNX3-201ENST00000308873 NDUFC1O43677 76 aa9.68□□□□□ -0.86
RUNX3-201ENST00000308873 FP248Q71RG6 208 aaPredicted RBP9.67□□□□□ -0.86
RUNX3-201ENST00000308873 FAM229BQ4G0N7 80 aa9.66□□□□□ -0.86
RUNX3-201ENST00000308873 BCE1O60756 84 aa9.65□□□□□ -0.86
RUNX3-201ENST00000308873 ERC2-IT1O76042 136 aa9.65□□□□□ -0.87
RUNX3-201ENST00000308873 A0A1W2PNM2 257 aa9.63□□□□□ -0.87
RUNX3-201ENST00000308873 PRLHP81277 87 aa9.63□□□□□ -0.87
RUNX3-201ENST00000308873 KRTAP10-11P60412 298 aa9.63□□□□□ -0.87
RUNX3-201ENST00000308873 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.63□□□□□ -0.87
RUNX3-201ENST00000308873 K7EQZ3 153 aa9.62□□□□□ -0.87
RUNX3-201ENST00000308873 KRTAP26-1Q6PEX3 210 aa9.62□□□□□ -0.87
RUNX3-201ENST00000308873 Q6ZRX8 168 aa9.62□□□□□ -0.87
RUNX3-201ENST00000308873 Q9BRP9 147 aa9.62□□□□□ -0.87
RUNX3-201ENST00000308873 DHRS4-AS1Q9P1J3 65 aa9.62□□□□□ -0.87
RUNX3-201ENST00000308873 OCR1Q9BZK8 76 aa9.61□□□□□ -0.87
RUNX3-201ENST00000308873 KCNQ1DNQ9H478 68 aa9.61□□□□□ -0.87
RUNX3-201ENST00000308873 PSCAO43653 123 aa9.6□□□□□ -0.87
RUNX3-201ENST00000308873 LINC01556Q5JQF7 62 aa9.6□□□□□ -0.87
RUNX3-201ENST00000308873 MRPL55Q7Z7F7 128 aaKnown RBP9.59□□□□□ -0.87
RUNX3-201ENST00000308873 EPM2AB3EWF7 344 aa9.58□□□□□ -0.88
RUNX3-201ENST00000308873 PRO0628Q9UI54 55 aa9.58□□□□□ -0.88
RUNX3-201ENST00000308873 A0A087WSZ3 146 aa9.58□□□□□ -0.88
RUNX3-201ENST00000308873 PSPHP1O15172 72 aa9.57□□□□□ -0.88
RUNX3-201ENST00000308873 RPL37AP61513 92 aaKnown RBP9.57□□□□□ -0.88
RUNX3-201ENST00000308873 Q8NBF4 154 aa9.56□□□□□ -0.88
RUNX3-201ENST00000308873 ATP5EP56381 51 aaPredicted RBP9.56□□□□□ -0.88
RUNX3-201ENST00000308873 SRRM2Q9UQ35 2752 aaKnown RBP9.55□□□□□ -0.88
RUNX3-201ENST00000308873 IGLV1-50A0A075B6I6 118 aa9.55□□□□□ -0.88
RUNX3-201ENST00000308873 LINC00476Q8WZB0 136 aa9.55□□□□□ -0.88
RUNX3-201ENST00000308873 LINC00588Q9Y4M8 146 aa9.55□□□□□ -0.88
RUNX3-201ENST00000308873 STAB2Q8WWQ8 2551 aa9.54□□□□□ -0.88
RUNX3-201ENST00000308873 KMT2BQ9UMN6 2715 aaPredicted RBP9.54□□□□□ -0.88
RUNX3-201ENST00000308873 REG3GQ6UW15 175 aa9.53□□□□□ -0.88
RUNX3-201ENST00000308873 IGLV5-48A0A075B6I7 105 aa9.53□□□□□ -0.88
RUNX3-201ENST00000308873 CSMD3Q7Z407 3707 aa9.52□□□□□ -0.88
RUNX3-201ENST00000308873 LINC00208Q96KT6 92 aa9.52□□□□□ -0.89
RUNX3-201ENST00000308873 H3BNG1 76 aa9.51□□□□□ -0.89
RUNX3-201ENST00000308873 UBE2AP49459 152 aa9.51□□□□□ -0.89
RUNX3-201ENST00000308873 DSCR10P59022 87 aa9.51□□□□□ -0.89
RUNX3-201ENST00000308873 HCG22E2RYF7 251 aa9.5□□□□□ -0.89
RUNX3-201ENST00000308873 WIPF1O43516 503 aa9.49□□□□□ -0.89
RUNX3-201ENST00000308873 UBE2DNLQ8IWF7 75 aa9.49□□□□□ -0.89
RUNX3-201ENST00000308873 CHTF8P0CG12 524 aa9.48□□□□□ -0.89
RUNX3-201ENST00000308873 TENM2Q9NT68 2774 aa9.48□□□□□ -0.89
RUNX3-201ENST00000308873 MP68P56378 58 aa9.48□□□□□ -0.89
RUNX3-201ENST00000308873 C1orf64Q8NEQ6 169 aa9.48□□□□□ -0.89
RUNX3-201ENST00000308873 H0Y9J4 135 aa9.48□□□□□ -0.89
RUNX3-201ENST00000308873 DNAH10OSP0CZ25 163 aa9.47□□□□□ -0.89
RUNX3-201ENST00000308873 IGFL1Q6UW32 110 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms