RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 FASNP49327 2511 aaKnown RBP13.78□□□□□ -0.2
LETM1-201ENST00000302787 TLX1NBP0CAT3 122 aa13.78□□□□□ -0.2
LETM1-201ENST00000302787 A8MUN3 132 aa13.77□□□□□ -0.2
LETM1-201ENST00000302787 PLA2G2DQ9UNK4 145 aa13.77□□□□□ -0.2
LETM1-201ENST00000302787 IGLV8-61A0A075B6I0 122 aa13.77□□□□□ -0.21
LETM1-201ENST00000302787 ZNF575Q86XF7 245 aa13.76□□□□□ -0.21
LETM1-201ENST00000302787 A0A0G2JQZ4 141 aa13.75□□□□□ -0.21
LETM1-201ENST00000302787 A0A1W2PNN7 141 aa13.75□□□□□ -0.21
LETM1-201ENST00000302787 C8orf17Q9NRJ1 99 aa13.75□□□□□ -0.21
LETM1-201ENST00000302787 H7BZZ5 65 aa13.71□□□□□ -0.21
LETM1-201ENST00000302787 PLA2G1BP04054 148 aaKnown RBP13.7□□□□□ -0.22
LETM1-201ENST00000302787 CYP4F30PQ9H0H9 118 aa13.69□□□□□ -0.22
LETM1-201ENST00000302787 DSCR10P59022 87 aa13.68□□□□□ -0.22
LETM1-201ENST00000302787 A0A1B0GVX0 72 aa13.68□□□□□ -0.22
LETM1-201ENST00000302787 CEP350Q5VT06 3117 aa13.67□□□□□ -0.22
LETM1-201ENST00000302787 WWC2-AS2Q96NR7 200 aa13.67□□□□□ -0.22
LETM1-201ENST00000302787 ZNF861PO60384 105 aa13.67□□□□□ -0.22
LETM1-201ENST00000302787 KRTAP1-3Q8IUG1 177 aa13.66□□□□□ -0.22
LETM1-201ENST00000302787 C9orf163Q8N9P6 203 aa13.65□□□□□ -0.22
LETM1-201ENST00000302787 CASC10Q5T4H9 136 aa13.64□□□□□ -0.23
LETM1-201ENST00000302787 A0A1W2PNM2 257 aa13.63□□□□□ -0.23
LETM1-201ENST00000302787 LINC01600Q96MT4 127 aa13.63□□□□□ -0.23
LETM1-201ENST00000302787 SSBP3-AS1Q7Z2R9 100 aa13.61□□□□□ -0.23
LETM1-201ENST00000302787 EPG5Q9HCE0 2579 aa13.61□□□□□ -0.23
LETM1-201ENST00000302787 OBSCN-AS1Q96MR7 158 aa13.61□□□□□ -0.23
LETM1-201ENST00000302787 A0A087WTM6 91 aa13.61□□□□□ -0.23
LETM1-201ENST00000302787 F8P00451 2351 aa13.6□□□□□ -0.23
LETM1-201ENST00000302787 UTRNP46939 3433 aa13.6□□□□□ -0.23
LETM1-201ENST00000302787 KRTAP1-1Q07627 177 aa13.56□□□□□ -0.24
LETM1-201ENST00000302787 ANAPC11Q9NYG5 84 aa13.56□□□□□ -0.24
LETM1-201ENST00000302787 UQCR11O14957 56 aa13.56□□□□□ -0.24
LETM1-201ENST00000302787 FAM104AQ969W3 186 aa13.55□□□□□ -0.24
LETM1-201ENST00000302787 CNBPP62633 177 aaKnown RBP13.54□□□□□ -0.24
LETM1-201ENST00000302787 LINC00336Q6ZUF6 198 aa13.54□□□□□ -0.24
LETM1-201ENST00000302787 IGLV5-48A0A075B6I7 105 aa13.52□□□□□ -0.25
LETM1-201ENST00000302787 SPRR4Q96PI1 79 aa13.51□□□□□ -0.25
LETM1-201ENST00000302787 LINC00304Q8N9R0 145 aa13.51□□□□□ -0.25
LETM1-201ENST00000302787 IGLV5-37A0A075B6J1 123 aa13.5□□□□□ -0.25
LETM1-201ENST00000302787 PSORS1C2Q9UIG4 136 aa13.5□□□□□ -0.25
LETM1-201ENST00000302787 APLNQ9ULZ1 77 aa13.49□□□□□ -0.25
LETM1-201ENST00000302787 IGLV7-43P04211 117 aa13.48□□□□□ -0.25
LETM1-201ENST00000302787 MIR22HGQ0VDD5 57 aa13.45□□□□□ -0.26
LETM1-201ENST00000302787 CHD7Q9P2D1 2997 aa13.44□□□□□ -0.26
LETM1-201ENST00000302787 C9orf92A6NGG3 77 aa13.43□□□□□ -0.26
LETM1-201ENST00000302787 SPANXA2-OT1Q8N9U9 137 aa13.43□□□□□ -0.26
LETM1-201ENST00000302787 C5orf42Q9H799 3197 aa13.41□□□□□ -0.26
LETM1-201ENST00000302787 HECTD1Q9ULT8 2610 aa13.38□□□□□ -0.27
LETM1-201ENST00000302787 BPTFQ12830 3046 aa13.38□□□□□ -0.27
LETM1-201ENST00000302787 OCR1Q9BZK8 76 aa13.38□□□□□ -0.27
LETM1-201ENST00000302787 SPINT4Q6UDR6 99 aa13.37□□□□□ -0.27
LETM1-201ENST00000302787 SMR3BP02814 79 aaPredicted RBP13.33□□□□□ -0.28
LETM1-201ENST00000302787 USP24Q9UPU5 2620 aa13.32□□□□□ -0.28
LETM1-201ENST00000302787 PCNTO95613 3336 aa13.31□□□□□ -0.28
LETM1-201ENST00000302787 FLNAP21333 2647 aaKnown RBP13.26□□□□□ -0.29
LETM1-201ENST00000302787 MGAM2Q2M2H8 2515 aa13.25□□□□□ -0.29
LETM1-201ENST00000302787 FLNBO75369 2602 aaKnown RBP13.24□□□□□ -0.29
LETM1-201ENST00000302787 KTN1-AS1Q86SY8 53 aa13.24□□□□□ -0.29
LETM1-201ENST00000302787 Q8NDZ9 215 aa13.23□□□□□ -0.29
LETM1-201ENST00000302787 J3QL48 77 aa13.22□□□□□ -0.29
LETM1-201ENST00000302787 CHD9Q3L8U1 2897 aa13.22□□□□□ -0.29
LETM1-201ENST00000302787 Q8N1X5 172 aa13.22□□□□□ -0.29
LETM1-201ENST00000302787 CD164Q04900 197 aa13.2□□□□□ -0.3
LETM1-201ENST00000302787 CDC42SE1Q9NRR8 79 aa13.2□□□□□ -0.3
LETM1-201ENST00000302787 CR1P17927 2039 aa13.19□□□□□ -0.3
LETM1-201ENST00000302787 Q1T7F1 81 aa13.19□□□□□ -0.3
LETM1-201ENST00000302787 CRIPTQ9P021 101 aa13.18□□□□□ -0.3
LETM1-201ENST00000302787 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.16□□□□□ -0.3
LETM1-201ENST00000302787 ITPR3Q14573 2671 aa13.15□□□□□ -0.3
LETM1-201ENST00000302787 WIPF1O43516 503 aa13.14□□□□□ -0.31
LETM1-201ENST00000302787 PRR26Q8N8Z3 221 aa13.14□□□□□ -0.31
LETM1-201ENST00000302787 COX6B2Q6YFQ2 88 aa13.14□□□□□ -0.31
LETM1-201ENST00000302787 LCA10Q71F78 164 aa13.12□□□□□ -0.31
LETM1-201ENST00000302787 TNP2Q05952 138 aa13.12□□□□□ -0.31
LETM1-201ENST00000302787 IGLV7-46A0A075B6I9 117 aa13.11□□□□□ -0.31
LETM1-201ENST00000302787 HTTP42858 3142 aa13.09□□□□□ -0.31
LETM1-201ENST00000302787 SPRR1AP35321 89 aa13.09□□□□□ -0.31
LETM1-201ENST00000302787 ATRQ13535 2644 aa13.06□□□□□ -0.32
LETM1-201ENST00000302787 CYSTM1Q9H1C7 97 aa13.05□□□□□ -0.32
LETM1-201ENST00000302787 MMP24-AS1A0A0U1RRL7 71 aa13.04□□□□□ -0.32
LETM1-201ENST00000302787 A0A0D9SG42 100 aa13.03□□□□□ -0.32
LETM1-201ENST00000302787 RBM12B-AS1Q9P1G2 102 aa13.03□□□□□ -0.32
LETM1-201ENST00000302787 HRES1P13985 223 aa13.02□□□□□ -0.33
LETM1-201ENST00000302787 FAM229BQ4G0N7 80 aa13□□□□□ -0.33
LETM1-201ENST00000302787 Q5XG85 94 aa12.98□□□□□ -0.33
LETM1-201ENST00000302787 Q75L30 129 aa12.96□□□□□ -0.33
LETM1-201ENST00000302787 PLAC8Q9NZF1 115 aa12.95□□□□□ -0.34
LETM1-201ENST00000302787 LINC01554Q52M75 96 aa12.92□□□□□ -0.34
LETM1-201ENST00000302787 HELZ2Q9BYK8 2649 aaKnown RBP12.91□□□□□ -0.34
LETM1-201ENST00000302787 A0A0C4DFX4 3053 aa12.91□□□□□ -0.34
LETM1-201ENST00000302787 RANBP2P49792 3224 aaKnown RBP12.91□□□□□ -0.34
LETM1-201ENST00000302787 SPRR1BP22528 89 aa12.91□□□□□ -0.34
LETM1-201ENST00000302787 TRANK1O15050 2925 aa12.91□□□□□ -0.34
LETM1-201ENST00000302787 FP248Q71RG6 208 aaPredicted RBP12.91□□□□□ -0.34
LETM1-201ENST00000302787 CFAP54Q96N23 3096 aa12.91□□□□□ -0.34
LETM1-201ENST00000302787 Q8N9P0 234 aaPredicted RBP12.9□□□□□ -0.34
LETM1-201ENST00000302787 LINC00472Q9H8W2 130 aa12.9□□□□□ -0.34
LETM1-201ENST00000302787 MAST4O15021 2626 aa12.9□□□□□ -0.35
LETM1-201ENST00000302787 KRTAP26-1Q6PEX3 210 aa12.89□□□□□ -0.35
LETM1-201ENST00000302787 LINC01558Q9Y6Z2 57 aa12.88□□□□□ -0.35
LETM1-201ENST00000302787 CENPEQ02224 2701 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 174.3 ms