RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 KRTAP4-5Q9BYR2 181 aa5.83□□□□□ -1.48
RFX3-201ENST00000302303 SRRM2Q9UQ35 2752 aaKnown RBP5.82□□□□□ -1.48
RFX3-201ENST00000302303 Q8N1X5 172 aa5.82□□□□□ -1.48
RFX3-201ENST00000302303 PKHD1L1Q86WI1 4243 aa5.81□□□□□ -1.48
RFX3-201ENST00000302303 A0A0B4J2C4 111 aa5.81□□□□□ -1.48
RFX3-201ENST00000302303 HINT1P49773 126 aaPredicted RBP5.81□□□□□ -1.48
RFX3-201ENST00000302303 KRTAP13-1Q8IUC0 172 aa5.81□□□□□ -1.48
RFX3-201ENST00000302303 TMEM126AQ9H061 195 aa5.81□□□□□ -1.48
RFX3-201ENST00000302303 UBE2BP63146 152 aa5.8□□□□□ -1.48
RFX3-201ENST00000302303 TRAV13-2A0A0B4J235 113 aa5.79□□□□□ -1.48
RFX3-201ENST00000302303 S100A7L2Q5SY68 101 aa5.79□□□□□ -1.48
RFX3-201ENST00000302303 OR13C6PQ8NH95 151 aa5.79□□□□□ -1.48
RFX3-201ENST00000302303 SMIM11BQ8TCY0 68 aa5.79□□□□□ -1.48
RFX3-201ENST00000302303 A6NDN8 102 aa5.79□□□□□ -1.48
RFX3-201ENST00000302303 K7ERJ3 54 aa5.79□□□□□ -1.48
RFX3-201ENST00000302303 PRYO14603 147 aa5.79□□□□□ -1.48
RFX3-201ENST00000302303 BCE1O60756 84 aa5.79□□□□□ -1.48
RFX3-201ENST00000302303 RPL37AP61513 92 aaKnown RBP5.79□□□□□ -1.48
RFX3-201ENST00000302303 Q5VSD8 79 aa5.79□□□□□ -1.48
RFX3-201ENST00000302303 REG3GQ6UW15 175 aa5.79□□□□□ -1.48
RFX3-201ENST00000302303 NHP2Q9NX24 153 aaKnown RBP5.79□□□□□ -1.48
RFX3-201ENST00000302303 TRAV23DV6A0A075B6W5 121 aa5.78□□□□□ -1.48
RFX3-201ENST00000302303 IGLV7-43P04211 117 aa5.78□□□□□ -1.48
RFX3-201ENST00000302303 C1orf137Q5JT78 98 aa5.78□□□□□ -1.48
RFX3-201ENST00000302303 PRO1854Q9UHT4 67 aa5.78□□□□□ -1.48
RFX3-201ENST00000302303 B5MCH6 92 aa5.77□□□□□ -1.49
RFX3-201ENST00000302303 ZNF73O43830 326 aaPredicted RBP5.77□□□□□ -1.49
RFX3-201ENST00000302303 RPL13AP40429 203 aaKnown RBP5.77□□□□□ -1.49
RFX3-201ENST00000302303 RPL28P46779 137 aaKnown RBP5.76□□□□□ -1.49
RFX3-201ENST00000302303 C6orf99Q4VX62 202 aa5.76□□□□□ -1.49
RFX3-201ENST00000302303 SNHG12Q9BXW3 62 aa5.76□□□□□ -1.49
RFX3-201ENST00000302303 PCP4L1A6NKN8 68 aa5.75□□□□□ -1.49
RFX3-201ENST00000302303 H0Y9J4 135 aa5.75□□□□□ -1.49
RFX3-201ENST00000302303 M0R143 59 aa5.75□□□□□ -1.49
RFX3-201ENST00000302303 PRLHP81277 87 aa5.75□□□□□ -1.49
RFX3-201ENST00000302303 Q9BRP9 147 aa5.75□□□□□ -1.49
RFX3-201ENST00000302303 ZNF861PO60384 105 aa5.74□□□□□ -1.49
RFX3-201ENST00000302303 SMCR5Q8TEV8 140 aa5.74□□□□□ -1.49
RFX3-201ENST00000302303 RAB37Q96AX2 223 aa5.74□□□□□ -1.49
RFX3-201ENST00000302303 H7C2G1 150 aa5.74□□□□□ -1.49
RFX3-201ENST00000302303 ERC2-IT1O76042 136 aa5.74□□□□□ -1.49
RFX3-201ENST00000302303 TSPAN13O95857 204 aa5.74□□□□□ -1.49
RFX3-201ENST00000302303 PLA2G1BP04054 148 aaKnown RBP5.74□□□□□ -1.49
RFX3-201ENST00000302303 ELOF1P60002 83 aaKnown RBP5.74□□□□□ -1.49
RFX3-201ENST00000302303 Q6ZRX8 168 aa5.74□□□□□ -1.49
RFX3-201ENST00000302303 FAM19A1Q7Z5A9 133 aa5.74□□□□□ -1.49
RFX3-201ENST00000302303 DIRC1Q969H9 104 aa5.74□□□□□ -1.49
RFX3-201ENST00000302303 CDIP1Q9H305 208 aa5.74□□□□□ -1.49
RFX3-201ENST00000302303 TRBV7-6A0A0J9YX20 115 aa5.73□□□□□ -1.49
RFX3-201ENST00000302303 ABCA13Q86UQ4 5058 aa5.72□□□□□ -1.49
RFX3-201ENST00000302303 TRIAP1O43715 76 aa5.72□□□□□ -1.49
RFX3-201ENST00000302303 BATFQ16520 125 aa5.72□□□□□ -1.49
RFX3-201ENST00000302303 LRP1Q07954 4544 aaKnown RBP5.72□□□□□ -1.49
RFX3-201ENST00000302303 ETDCA0A1B0GVM5 59 aa5.71□□□□□ -1.5
RFX3-201ENST00000302303 CBY1Q9Y3M2 126 aa5.71□□□□□ -1.5
RFX3-201ENST00000302303 TAX1BP3O14907 124 aa5.7□□□□□ -1.5
RFX3-201ENST00000302303 KRTAP1-4P0C5Y4 121 aa5.7□□□□□ -1.5
RFX3-201ENST00000302303 COX7BP24311 80 aa5.7□□□□□ -1.5
RFX3-201ENST00000302303 UBE2AP49459 152 aa5.7□□□□□ -1.5
RFX3-201ENST00000302303 SPINK6Q6UWN8 80 aa5.7□□□□□ -1.5
RFX3-201ENST00000302303 FAM218AQ96MZ4 157 aa5.7□□□□□ -1.5
RFX3-201ENST00000302303 FAT3Q8TDW7 4589 aa5.7□□□□□ -1.5
RFX3-201ENST00000302303 MYCBP2O75592 4640 aa5.7□□□□□ -1.5
RFX3-201ENST00000302303 LINC00575Q6W349 94 aa5.69□□□□□ -1.5
RFX3-201ENST00000302303 NAA38Q9BRA0 125 aaKnown RBP5.69□□□□□ -1.5
RFX3-201ENST00000302303 INAFM2P0DMQ5 153 aa5.69□□□□□ -1.5
RFX3-201ENST00000302303 HIGD2AQ9BW72 106 aa5.69□□□□□ -1.5
RFX3-201ENST00000302303 LINC01547P58512 204 aaPredicted RBP5.67□□□□□ -1.5
RFX3-201ENST00000302303 Q1RN00 199 aa5.67□□□□□ -1.5
RFX3-201ENST00000302303 ST20-AS1Q8NBB2 130 aa5.67□□□□□ -1.5
RFX3-201ENST00000302303 H0YGX0 51 aa5.66□□□□□ -1.5
RFX3-201ENST00000302303 CLEC2BQ92478 149 aa5.66□□□□□ -1.5
RFX3-201ENST00000302303 ANAPC11Q9NYG5 84 aa5.66□□□□□ -1.5
RFX3-201ENST00000302303 DHRS4-AS1Q9P1J3 65 aa5.66□□□□□ -1.5
RFX3-201ENST00000302303 C9orf118A6NHY6 69 aa5.65□□□□□ -1.5
RFX3-201ENST00000302303 VAMP3Q15836 100 aa5.65□□□□□ -1.5
RFX3-201ENST00000302303 SPRR4Q96PI1 79 aa5.65□□□□□ -1.5
RFX3-201ENST00000302303 TNXBP22105 4242 aa5.65□□□□□ -1.5
RFX3-201ENST00000302303 FLG2Q5D862 2391 aaPredicted RBP5.65□□□□□ -1.51
RFX3-201ENST00000302303 PCLOQ9Y6V0 5065 aa5.65□□□□□ -1.51
RFX3-201ENST00000302303 hADV29S1A0JD25 119 aa5.64□□□□□ -1.51
RFX3-201ENST00000302303 H3BUT2 72 aa5.64□□□□□ -1.51
RFX3-201ENST00000302303 PSMB2P49721 201 aa5.64□□□□□ -1.51
RFX3-201ENST00000302303 COL5A1-AS1Q5SY13 56 aa5.64□□□□□ -1.51
RFX3-201ENST00000302303 IGLV5-48A0A075B6I7 105 aa5.64□□□□□ -1.51
RFX3-201ENST00000302303 LINC00483Q53H64 154 aa5.64□□□□□ -1.51
RFX3-201ENST00000302303 A0A087X002 238 aa5.63□□□□□ -1.51
RFX3-201ENST00000302303 SPRR1BP22528 89 aa5.63□□□□□ -1.51
RFX3-201ENST00000302303 Q8N377 158 aa5.63□□□□□ -1.51
RFX3-201ENST00000302303 LST1O00453 97 aa5.62□□□□□ -1.51
RFX3-201ENST00000302303 TCL1BO95988 128 aa5.62□□□□□ -1.51
RFX3-201ENST00000302303 Q6ZQY7 126 aa5.62□□□□□ -1.51
RFX3-201ENST00000302303 SMIM29Q86T20 159 aa5.62□□□□□ -1.51
RFX3-201ENST00000302303 LINC01600Q96MT4 127 aa5.62□□□□□ -1.51
RFX3-201ENST00000302303 A0A1B0GX51 115 aa5.61□□□□□ -1.51
RFX3-201ENST00000302303 A0A1W2PPM0 123 aa5.61□□□□□ -1.51
RFX3-201ENST00000302303 COX6CP09669 75 aa5.61□□□□□ -1.51
RFX3-201ENST00000302303 MT1HL1P0DM35 61 aa5.61□□□□□ -1.51
RFX3-201ENST00000302303 KRTAP10-8P60410 259 aa5.61□□□□□ -1.51
RFX3-201ENST00000302303 KRTAP13-2Q52LG2 175 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms