RNA–Protein interactions for RNA: ENST00000298231.5

PHOX2A-201, Transcript of paired like homeobox 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHOX2A, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2A-201ENST00000298231 RBM3P98179 157 aaKnown RBP17.1■□□□□ 0.33
PHOX2A-201ENST00000298231 PRYO14603 147 aa17.09■□□□□ 0.33
PHOX2A-201ENST00000298231 KRTAP1-5Q9BYS1 174 aa17.08■□□□□ 0.32
PHOX2A-201ENST00000298231 LAMTOR3Q9UHA4 124 aa17.08■□□□□ 0.32
PHOX2A-201ENST00000298231 NDUFV3P56181 108 aaKnown RBP17.07■□□□□ 0.32
PHOX2A-201ENST00000298231 C14orf177Q52M58 125 aa17.07■□□□□ 0.32
PHOX2A-201ENST00000298231 Q6JHZ5 121 aa17.07■□□□□ 0.32
PHOX2A-201ENST00000298231 CNBPP62633 177 aaKnown RBP17.07■□□□□ 0.32
PHOX2A-201ENST00000298231 TENM2Q9NT68 2774 aa17.06■□□□□ 0.32
PHOX2A-201ENST00000298231 ANAPC13Q9BS18 74 aa17.06■□□□□ 0.32
PHOX2A-201ENST00000298231 LINC00846Q9NV44 126 aa17.06■□□□□ 0.32
PHOX2A-201ENST00000298231 DYNC2H1Q8NCM8 4307 aaKnown RBP17.05■□□□□ 0.32
PHOX2A-201ENST00000298231 Q6ZQT0 140 aa17.04■□□□□ 0.32
PHOX2A-201ENST00000298231 PSCAO43653 123 aa17.02■□□□□ 0.32
PHOX2A-201ENST00000298231 DSCR8Q96T75 97 aa17.01■□□□□ 0.31
PHOX2A-201ENST00000298231 IGLV1-50A0A075B6I6 118 aa17.01■□□□□ 0.31
PHOX2A-201ENST00000298231 ATP5EP2Q5VTU8 51 aa17.01■□□□□ 0.31
PHOX2A-201ENST00000298231 SPRR1AP35321 89 aa17■□□□□ 0.31
PHOX2A-201ENST00000298231 DNAH1Q9P2D7 4330 aa17■□□□□ 0.31
PHOX2A-201ENST00000298231 KMT2CQ8NEZ4 4911 aaKnown RBP16.99■□□□□ 0.31
PHOX2A-201ENST00000298231 DHRS4-AS1Q9P1J3 65 aa16.99■□□□□ 0.31
PHOX2A-201ENST00000298231 PKIGQ9Y2B9 76 aa16.98■□□□□ 0.31
PHOX2A-201ENST00000298231 MRPL55Q7Z7F7 128 aaKnown RBP16.97■□□□□ 0.31
PHOX2A-201ENST00000298231 PLECQ15149 4684 aaKnown RBP16.96■□□□□ 0.31
PHOX2A-201ENST00000298231 FAM168BA1KXE4 195 aa16.95■□□□□ 0.3
PHOX2A-201ENST00000298231 KRTAP4-16G5E9R7 235 aaPredicted RBP16.95■□□□□ 0.3
PHOX2A-201ENST00000298231 Q6ZRX8 168 aa16.95■□□□□ 0.3
PHOX2A-201ENST00000298231 C16orf90A8MZG2 172 aa16.94■□□□□ 0.3
PHOX2A-201ENST00000298231 TRBV7-4A0A0J9YYF1 115 aa16.94■□□□□ 0.3
PHOX2A-201ENST00000298231 KRTAP7-1Q8IUC3 87 aa16.94■□□□□ 0.3
PHOX2A-201ENST00000298231 LCE6AA0A183 80 aa16.93■□□□□ 0.3
PHOX2A-201ENST00000298231 UBL5Q9BZL1 73 aa16.93■□□□□ 0.3
PHOX2A-201ENST00000298231 NBDYA0A0U1RRE5 68 aa16.92■□□□□ 0.3
PHOX2A-201ENST00000298231 ETDCA0A1B0GVM5 59 aa16.91■□□□□ 0.3
PHOX2A-201ENST00000298231 B5MCH6 92 aa16.91■□□□□ 0.3
PHOX2A-201ENST00000298231 FAM19A5Q7Z5A7 132 aaPredicted RBP16.91■□□□□ 0.3
PHOX2A-201ENST00000298231 LYSTQ99698 3801 aa16.9■□□□□ 0.3
PHOX2A-201ENST00000298231 FAM236AA0A1B0GUQ0 79 aa16.89■□□□□ 0.29
PHOX2A-201ENST00000298231 FAM236BA0A1B0GV22 79 aa16.89■□□□□ 0.29
PHOX2A-201ENST00000298231 RPL37AP8A6NKH3 93 aa16.88■□□□□ 0.29
PHOX2A-201ENST00000298231 ALMS1Q8TCU4 4167 aa16.87■□□□□ 0.29
PHOX2A-201ENST00000298231 LINC00476Q8WZB0 136 aa16.87■□□□□ 0.29
PHOX2A-201ENST00000298231 SACSQ9NZJ4 4579 aa16.86■□□□□ 0.29
PHOX2A-201ENST00000298231 A0A096LNI7 61 aa16.85■□□□□ 0.29
PHOX2A-201ENST00000298231 HIST1H4AP62805 103 aaKnown RBP16.83■□□□□ 0.28
PHOX2A-201ENST00000298231 IGKV3D-7A0A0C4DH55 119 aa16.82■□□□□ 0.28
PHOX2A-201ENST00000298231 REG3GQ6UW15 175 aa16.82■□□□□ 0.28
PHOX2A-201ENST00000298231 Q9BRP9 147 aa16.81■□□□□ 0.28
PHOX2A-201ENST00000298231 LRCOL1A6NCL2 159 aa16.8■□□□□ 0.28
PHOX2A-201ENST00000298231 IGLV5-48A0A075B6I7 105 aa16.79■□□□□ 0.28
PHOX2A-201ENST00000298231 LY6G6CO95867 125 aa16.79■□□□□ 0.28
PHOX2A-201ENST00000298231 Q6ZRN7 208 aaPredicted RBP16.79■□□□□ 0.28
PHOX2A-201ENST00000298231 LINC01547P58512 204 aaPredicted RBP16.78■□□□□ 0.28
PHOX2A-201ENST00000298231 Q8N377 158 aa16.78■□□□□ 0.28
PHOX2A-201ENST00000298231 C9orf163Q8N9P6 203 aa16.77■□□□□ 0.28
PHOX2A-201ENST00000298231 RYR3Q15413 4870 aa16.75■□□□□ 0.27
PHOX2A-201ENST00000298231 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.75■□□□□ 0.27
PHOX2A-201ENST00000298231 IGKV2-24A0A0C4DH68 120 aa16.75■□□□□ 0.27
PHOX2A-201ENST00000298231 ATOX1O00244 68 aa16.75■□□□□ 0.27
PHOX2A-201ENST00000298231 LINC00474Q9P2X8 69 aa16.75■□□□□ 0.27
PHOX2A-201ENST00000298231 M0R2N4 97 aa16.73■□□□□ 0.27
PHOX2A-201ENST00000298231 Q6ZVQ6 151 aa16.73■□□□□ 0.27
PHOX2A-201ENST00000298231 RYR2Q92736 4967 aa16.72■□□□□ 0.27
PHOX2A-201ENST00000298231 VPS13DQ5THJ4 4388 aa16.72■□□□□ 0.27
PHOX2A-201ENST00000298231 A0A1B0GW54 56 aa16.71■□□□□ 0.27
PHOX2A-201ENST00000298231 A0A1W2PNN7 141 aa16.71■□□□□ 0.27
PHOX2A-201ENST00000298231 UBE2BP63146 152 aa16.71■□□□□ 0.27
PHOX2A-201ENST00000298231 CXCL6P80162 114 aa16.69■□□□□ 0.26
PHOX2A-201ENST00000298231 DEFB105AQ8NG35 78 aa16.69■□□□□ 0.26
PHOX2A-201ENST00000298231 TNP2Q05952 138 aa16.67■□□□□ 0.26
PHOX2A-201ENST00000298231 HYDINQ4G0P3 5121 aa16.65■□□□□ 0.26
PHOX2A-201ENST00000298231 CCDC179H3BU77 68 aa16.64■□□□□ 0.25
PHOX2A-201ENST00000298231 KMT2AQ03164 3969 aa16.62■□□□□ 0.25
PHOX2A-201ENST00000298231 H0Y9J4 135 aa16.62■□□□□ 0.25
PHOX2A-201ENST00000298231 A0A087WVE0 104 aa16.62■□□□□ 0.25
PHOX2A-201ENST00000298231 ERC2-IT1O76042 136 aa16.61■□□□□ 0.25
PHOX2A-201ENST00000298231 FAM19A1Q7Z5A9 133 aa16.61■□□□□ 0.25
PHOX2A-201ENST00000298231 ST20-AS1Q8NBB2 130 aa16.61■□□□□ 0.25
PHOX2A-201ENST00000298231 UQCRQO14949 82 aa16.59■□□□□ 0.25
PHOX2A-201ENST00000298231 CHTF8P0CG12 524 aa16.59■□□□□ 0.25
PHOX2A-201ENST00000298231 HAMPP81172 84 aa16.59■□□□□ 0.25
PHOX2A-201ENST00000298231 FUSP35637 526 aaKnown RBP eCLIP16.59■□□□□ 0.25
PHOX2A-201ENST00000298231 DNAH6Q9C0G6 4158 aa16.59■□□□□ 0.25
PHOX2A-201ENST00000298231 Q6ZR54 194 aa16.58■□□□□ 0.24
PHOX2A-201ENST00000298231 C3orf22Q8N5N4 141 aa16.56■□□□□ 0.24
PHOX2A-201ENST00000298231 A0A087WTM6 91 aa16.56■□□□□ 0.24
PHOX2A-201ENST00000298231 COX7CP15954 63 aa16.56■□□□□ 0.24
PHOX2A-201ENST00000298231 C1orf137Q5JT78 98 aa16.55■□□□□ 0.24
PHOX2A-201ENST00000298231 PHF5AQ7RTV0 110 aaKnown RBP16.55■□□□□ 0.24
PHOX2A-201ENST00000298231 BCE1O60756 84 aa16.54■□□□□ 0.24
PHOX2A-201ENST00000298231 EPM2AB3EWF7 344 aa16.53■□□□□ 0.24
PHOX2A-201ENST00000298231 F8WEM9 126 aa16.53■□□□□ 0.24
PHOX2A-201ENST00000298231 PRLHP81277 87 aa16.53■□□□□ 0.24
PHOX2A-201ENST00000298231 Q8NBF4 154 aa16.53■□□□□ 0.24
PHOX2A-201ENST00000298231 SMIM29Q86T20 159 aa16.5■□□□□ 0.23
PHOX2A-201ENST00000298231 SERP2Q8N6R1 65 aa16.5■□□□□ 0.23
PHOX2A-201ENST00000298231 SPACA4Q8TDM5 124 aa16.5■□□□□ 0.23
PHOX2A-201ENST00000298231 NREPQ16612 68 aa16.5■□□□□ 0.23
PHOX2A-201ENST00000298231 SPRR4Q96PI1 79 aa16.49■□□□□ 0.23
PHOX2A-201ENST00000298231 DNAH10Q8IVF4 4471 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms