RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 F8P00451 2351 aa11.26□□□□□ -0.61
CDCP1-201ENST00000296129 A0A087WTM6 91 aa11.26□□□□□ -0.61
CDCP1-201ENST00000296129 CASC10Q5T4H9 136 aa11.26□□□□□ -0.61
CDCP1-201ENST00000296129 Q8N377 158 aa11.25□□□□□ -0.61
CDCP1-201ENST00000296129 PLA2G2DQ9UNK4 145 aa11.23□□□□□ -0.61
CDCP1-201ENST00000296129 A0A0G2JQZ4 141 aa11.22□□□□□ -0.61
CDCP1-201ENST00000296129 A0A1W2PNN7 141 aa11.22□□□□□ -0.61
CDCP1-201ENST00000296129 ZNF575Q86XF7 245 aa11.22□□□□□ -0.61
CDCP1-201ENST00000296129 C8orf87E5RJ46 101 aa11.22□□□□□ -0.61
CDCP1-201ENST00000296129 MRPL34Q9BQ48 92 aaKnown RBP11.22□□□□□ -0.61
CDCP1-201ENST00000296129 HTTP42858 3142 aa11.22□□□□□ -0.61
CDCP1-201ENST00000296129 BPTFQ12830 3046 aa11.22□□□□□ -0.61
CDCP1-201ENST00000296129 APLNQ9ULZ1 77 aa11.21□□□□□ -0.61
CDCP1-201ENST00000296129 C4orf26Q17RF5 130 aa11.21□□□□□ -0.62
CDCP1-201ENST00000296129 ZNF861PO60384 105 aa11.2□□□□□ -0.62
CDCP1-201ENST00000296129 C9orf163Q8N9P6 203 aa11.2□□□□□ -0.62
CDCP1-201ENST00000296129 CHD9Q3L8U1 2897 aa11.19□□□□□ -0.62
CDCP1-201ENST00000296129 RPS28P62857 69 aaKnown RBP11.18□□□□□ -0.62
CDCP1-201ENST00000296129 LOC101927531A0A1B0GV80 90 aa11.18□□□□□ -0.62
CDCP1-201ENST00000296129 DSCR10P59022 87 aa11.17□□□□□ -0.62
CDCP1-201ENST00000296129 ANAPC11Q9NYG5 84 aa11.15□□□□□ -0.62
CDCP1-201ENST00000296129 ATP11AUNQ6ZP68 121 aa11.14□□□□□ -0.63
CDCP1-201ENST00000296129 PRR15Q8IV56 129 aa11.14□□□□□ -0.63
CDCP1-201ENST00000296129 C8orf17Q9NRJ1 99 aa11.14□□□□□ -0.63
CDCP1-201ENST00000296129 ERC2-IT1O76042 136 aa11.14□□□□□ -0.63
CDCP1-201ENST00000296129 CNBPP62633 177 aaKnown RBP11.12□□□□□ -0.63
CDCP1-201ENST00000296129 HECTD1Q9ULT8 2610 aa11.11□□□□□ -0.63
CDCP1-201ENST00000296129 PRO0628Q9UI54 55 aa11.11□□□□□ -0.63
CDCP1-201ENST00000296129 LINC00304Q8N9R0 145 aa11.11□□□□□ -0.63
CDCP1-201ENST00000296129 SMR3BP02814 79 aaPredicted RBP11.1□□□□□ -0.63
CDCP1-201ENST00000296129 SSBP3-AS1Q7Z2R9 100 aa11.1□□□□□ -0.63
CDCP1-201ENST00000296129 PSORS1C2Q9UIG4 136 aa11.1□□□□□ -0.63
CDCP1-201ENST00000296129 A0A1B0GVX0 72 aa11.1□□□□□ -0.63
CDCP1-201ENST00000296129 IGLV8-61A0A075B6I0 122 aa11.09□□□□□ -0.63
CDCP1-201ENST00000296129 IGLV7-43P04211 117 aa11.09□□□□□ -0.63
CDCP1-201ENST00000296129 COA5Q86WW8 74 aa11.07□□□□□ -0.64
CDCP1-201ENST00000296129 OBSCN-AS1Q96MR7 158 aa11.06□□□□□ -0.64
CDCP1-201ENST00000296129 SPRR4Q96PI1 79 aa11.05□□□□□ -0.64
CDCP1-201ENST00000296129 C9orf92A6NGG3 77 aa11.05□□□□□ -0.64
CDCP1-201ENST00000296129 J3QL48 77 aa11.05□□□□□ -0.64
CDCP1-201ENST00000296129 FAM104AQ969W3 186 aa11.04□□□□□ -0.64
CDCP1-201ENST00000296129 A0A1W2PNM2 257 aa11.03□□□□□ -0.64
CDCP1-201ENST00000296129 IGLV5-37A0A075B6J1 123 aa11.02□□□□□ -0.65
CDCP1-201ENST00000296129 KLKP1Q107X0 134 aa10.99□□□□□ -0.65
CDCP1-201ENST00000296129 RANBP2P49792 3224 aaKnown RBP10.98□□□□□ -0.65
CDCP1-201ENST00000296129 MKI67P46013 3256 aaKnown RBP10.97□□□□□ -0.65
CDCP1-201ENST00000296129 LINC00336Q6ZUF6 198 aa10.96□□□□□ -0.66
CDCP1-201ENST00000296129 A8MUN3 132 aa10.95□□□□□ -0.66
CDCP1-201ENST00000296129 FLNAP21333 2647 aaKnown RBP10.95□□□□□ -0.66
CDCP1-201ENST00000296129 CR1P17927 2039 aa10.94□□□□□ -0.66
CDCP1-201ENST00000296129 FLNBO75369 2602 aaKnown RBP10.93□□□□□ -0.66
CDCP1-201ENST00000296129 IGLV5-48A0A075B6I7 105 aa10.92□□□□□ -0.66
CDCP1-201ENST00000296129 TRANK1O15050 2925 aa10.92□□□□□ -0.66
CDCP1-201ENST00000296129 WIPF1O43516 503 aa10.92□□□□□ -0.66
CDCP1-201ENST00000296129 LINC01600Q96MT4 127 aa10.92□□□□□ -0.66
CDCP1-201ENST00000296129 TNP2Q05952 138 aa10.91□□□□□ -0.66
CDCP1-201ENST00000296129 LAMA3Q16787 3333 aa10.91□□□□□ -0.66
CDCP1-201ENST00000296129 H7BZZ5 65 aa10.9□□□□□ -0.66
CDCP1-201ENST00000296129 ITPR3Q14573 2671 aa10.87□□□□□ -0.67
CDCP1-201ENST00000296129 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.87□□□□□ -0.67
CDCP1-201ENST00000296129 CYP4F30PQ9H0H9 118 aa10.84□□□□□ -0.67
CDCP1-201ENST00000296129 COX6B2Q6YFQ2 88 aa10.83□□□□□ -0.68
CDCP1-201ENST00000296129 BRCA2P51587 3418 aa10.83□□□□□ -0.68
CDCP1-201ENST00000296129 UQCR11O14957 56 aa10.81□□□□□ -0.68
CDCP1-201ENST00000296129 MGAM2Q2M2H8 2515 aa10.79□□□□□ -0.68
CDCP1-201ENST00000296129 Q8NDZ9 215 aa10.79□□□□□ -0.68
CDCP1-201ENST00000296129 USP24Q9UPU5 2620 aa10.78□□□□□ -0.68
CDCP1-201ENST00000296129 HELZ2Q9BYK8 2649 aaKnown RBP10.75□□□□□ -0.69
CDCP1-201ENST00000296129 MIR22HGQ0VDD5 57 aa10.74□□□□□ -0.69
CDCP1-201ENST00000296129 Q8N1X5 172 aa10.74□□□□□ -0.69
CDCP1-201ENST00000296129 CD164Q04900 197 aa10.72□□□□□ -0.69
CDCP1-201ENST00000296129 SPANXA2-OT1Q8N9U9 137 aa10.72□□□□□ -0.69
CDCP1-201ENST00000296129 OCR1Q9BZK8 76 aa10.71□□□□□ -0.69
CDCP1-201ENST00000296129 MGAQ8IWI9 3026 aa10.71□□□□□ -0.7
CDCP1-201ENST00000296129 ATRQ13535 2644 aa10.7□□□□□ -0.7
CDCP1-201ENST00000296129 PRR26Q8N8Z3 221 aa10.69□□□□□ -0.7
CDCP1-201ENST00000296129 CFAP54Q96N23 3096 aa10.69□□□□□ -0.7
CDCP1-201ENST00000296129 CFAP46Q8IYW2 2715 aa10.68□□□□□ -0.7
CDCP1-201ENST00000296129 PLAC8Q9NZF1 115 aa10.67□□□□□ -0.7
CDCP1-201ENST00000296129 RBM12B-AS1Q9P1G2 102 aa10.67□□□□□ -0.7
CDCP1-201ENST00000296129 SPRR1AP35321 89 aa10.65□□□□□ -0.7
CDCP1-201ENST00000296129 KRTAP1-5Q9BYS1 174 aa10.63□□□□□ -0.71
CDCP1-201ENST00000296129 SPINT4Q6UDR6 99 aa10.62□□□□□ -0.71
CDCP1-201ENST00000296129 ZNF292O60281 2723 aa10.61□□□□□ -0.71
CDCP1-201ENST00000296129 A0A0C4DFX4 3053 aa10.61□□□□□ -0.71
CDCP1-201ENST00000296129 PRUNE2Q8WUY3 3088 aa10.61□□□□□ -0.71
CDCP1-201ENST00000296129 UNC80Q8N2C7 3258 aa10.61□□□□□ -0.71
CDCP1-201ENST00000296129 LAMA2P24043 3122 aaKnown RBP10.6□□□□□ -0.71
CDCP1-201ENST00000296129 FAM229BQ4G0N7 80 aa10.59□□□□□ -0.71
CDCP1-201ENST00000296129 MAST4O15021 2626 aa10.59□□□□□ -0.71
CDCP1-201ENST00000296129 AKAP13Q12802 2813 aa10.59□□□□□ -0.71
CDCP1-201ENST00000296129 KRTAP26-1Q6PEX3 210 aa10.59□□□□□ -0.71
CDCP1-201ENST00000296129 CDH23Q9H251 3354 aa10.57□□□□□ -0.72
CDCP1-201ENST00000296129 CENPEQ02224 2701 aa10.56□□□□□ -0.72
CDCP1-201ENST00000296129 MMP24-AS1A0A0U1RRL7 71 aa10.55□□□□□ -0.72
CDCP1-201ENST00000296129 IGLV7-46A0A075B6I9 117 aa10.55□□□□□ -0.72
CDCP1-201ENST00000296129 A0A0D9SG42 100 aa10.54□□□□□ -0.72
CDCP1-201ENST00000296129 WDFY4Q6ZS81 3184 aa10.54□□□□□ -0.72
CDCP1-201ENST00000296129 LINC01554Q52M75 96 aa10.52□□□□□ -0.73
CDCP1-201ENST00000296129 CRIPTQ9P021 101 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms