RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 C7orf33Q8WU49 177 aa13.27□□□□□ -0.28
TMED4-201ENST00000289577 C3orf84H3BNL1 204 aa13.27□□□□□ -0.29
TMED4-201ENST00000289577 SERTAD4-AS1Q5TG53 156 aa13.27□□□□□ -0.29
TMED4-201ENST00000289577 Q6ZTC4 211 aa13.27□□□□□ -0.29
TMED4-201ENST00000289577 UNC79Q9P2D8 2635 aa13.27□□□□□ -0.29
TMED4-201ENST00000289577 A0A0U1RQV1 116 aa13.26□□□□□ -0.29
TMED4-201ENST00000289577 LINC01556Q5JQF7 62 aa13.26□□□□□ -0.29
TMED4-201ENST00000289577 NKAPP1Q8N9T2 125 aa13.26□□□□□ -0.29
TMED4-201ENST00000289577 NOTCH2Q04721 2471 aa13.25□□□□□ -0.29
TMED4-201ENST00000289577 INAFM1C9JVW0 142 aa13.25□□□□□ -0.29
TMED4-201ENST00000289577 TENM1Q9UKZ4 2725 aa13.25□□□□□ -0.29
TMED4-201ENST00000289577 DEFB105AQ8NG35 78 aa13.25□□□□□ -0.29
TMED4-201ENST00000289577 RETNQ9HD89 108 aa13.25□□□□□ -0.29
TMED4-201ENST00000289577 IGKV2D-24A0A075B6R9 120 aa13.24□□□□□ -0.29
TMED4-201ENST00000289577 A0A1B0GW54 56 aa13.24□□□□□ -0.29
TMED4-201ENST00000289577 PLA2G2DQ9UNK4 145 aa13.22□□□□□ -0.29
TMED4-201ENST00000289577 TRRAPQ9Y4A5 3859 aa13.22□□□□□ -0.29
TMED4-201ENST00000289577 J3QKU1 62 aa13.21□□□□□ -0.29
TMED4-201ENST00000289577 PRYO14603 147 aa13.21□□□□□ -0.29
TMED4-201ENST00000289577 DHRS4-AS1Q9P1J3 65 aa13.21□□□□□ -0.29
TMED4-201ENST00000289577 TLX1NBP0CAT3 122 aa13.21□□□□□ -0.29
TMED4-201ENST00000289577 FASNP49327 2511 aaKnown RBP13.2□□□□□ -0.3
TMED4-201ENST00000289577 KRTAP4-16G5E9R7 235 aaPredicted RBP13.2□□□□□ -0.3
TMED4-201ENST00000289577 Q6ZRX8 168 aa13.2□□□□□ -0.3
TMED4-201ENST00000289577 TNP2Q05952 138 aa13.19□□□□□ -0.3
TMED4-201ENST00000289577 MRAPQ8TCY5 172 aa13.19□□□□□ -0.3
TMED4-201ENST00000289577 A0A1W2PNM2 257 aa13.19□□□□□ -0.3
TMED4-201ENST00000289577 FUSP35637 526 aaKnown RBP eCLIP13.19□□□□□ -0.3
TMED4-201ENST00000289577 LINC00336Q6ZUF6 198 aa13.19□□□□□ -0.3
TMED4-201ENST00000289577 Q9BRP9 147 aa13.18□□□□□ -0.3
TMED4-201ENST00000289577 LINC00474Q9P2X8 69 aa13.17□□□□□ -0.3
TMED4-201ENST00000289577 SPRR1AP35321 89 aa13.17□□□□□ -0.3
TMED4-201ENST00000289577 IGLV5-37A0A075B6J1 123 aa13.16□□□□□ -0.3
TMED4-201ENST00000289577 IGLV1-50A0A075B6I6 118 aa13.15□□□□□ -0.31
TMED4-201ENST00000289577 PRO0628Q9UI54 55 aa13.14□□□□□ -0.31
TMED4-201ENST00000289577 DNAH10OSP0CZ25 163 aa13.13□□□□□ -0.31
TMED4-201ENST00000289577 HIGD2AQ9BW72 106 aa13.13□□□□□ -0.31
TMED4-201ENST00000289577 RPL37AP8A6NKH3 93 aa13.13□□□□□ -0.31
TMED4-201ENST00000289577 C1orf137Q5JT78 98 aa13.13□□□□□ -0.31
TMED4-201ENST00000289577 Q8NBF4 154 aa13.13□□□□□ -0.31
TMED4-201ENST00000289577 LCE6AA0A183 80 aa13.12□□□□□ -0.31
TMED4-201ENST00000289577 KRTAP10-11P60412 298 aa13.12□□□□□ -0.31
TMED4-201ENST00000289577 SMIM29Q86T20 159 aa13.12□□□□□ -0.31
TMED4-201ENST00000289577 SPRR4Q96PI1 79 aa13.12□□□□□ -0.31
TMED4-201ENST00000289577 DEFB131BA0A096LNP1 70 aa13.11□□□□□ -0.31
TMED4-201ENST00000289577 FAM168BA1KXE4 195 aa13.11□□□□□ -0.31
TMED4-201ENST00000289577 HELZ2Q9BYK8 2649 aaKnown RBP13.11□□□□□ -0.31
TMED4-201ENST00000289577 NSD1Q96L73 2696 aaPredicted RBP13.11□□□□□ -0.31
TMED4-201ENST00000289577 ST20-AS1Q8NBB2 130 aa13.11□□□□□ -0.31
TMED4-201ENST00000289577 ATRQ13535 2644 aa13.1□□□□□ -0.31
TMED4-201ENST00000289577 ETDCA0A1B0GVM5 59 aa13.1□□□□□ -0.31
TMED4-201ENST00000289577 TEP1Q99973 2627 aaKnown RBP13.1□□□□□ -0.31
TMED4-201ENST00000289577 FAM229BQ4G0N7 80 aa13.09□□□□□ -0.31
TMED4-201ENST00000289577 OXLD1Q5BKU9 147 aa13.09□□□□□ -0.31
TMED4-201ENST00000289577 KRTAP7-1Q8IUC3 87 aa13.09□□□□□ -0.31
TMED4-201ENST00000289577 FAM30AQ9NZY2 134 aa13.08□□□□□ -0.32
TMED4-201ENST00000289577 OTOGQ6ZRI0 2925 aa13.08□□□□□ -0.32
TMED4-201ENST00000289577 PKD1L1Q8TDX9 2849 aa13.07□□□□□ -0.32
TMED4-201ENST00000289577 DSCR10P59022 87 aa13.06□□□□□ -0.32
TMED4-201ENST00000289577 C11orf45Q8TAV5 145 aa13.05□□□□□ -0.32
TMED4-201ENST00000289577 CASC10Q5T4H9 136 aa13.03□□□□□ -0.32
TMED4-201ENST00000289577 DNAH1Q9P2D7 4330 aa13.01□□□□□ -0.33
TMED4-201ENST00000289577 MRPL55Q7Z7F7 128 aaKnown RBP13.01□□□□□ -0.33
TMED4-201ENST00000289577 ZCCHC13Q8WW36 166 aaKnown RBP13.01□□□□□ -0.33
TMED4-201ENST00000289577 K7EQZ3 153 aa12.99□□□□□ -0.33
TMED4-201ENST00000289577 ANK2Q01484 3957 aa12.98□□□□□ -0.33
TMED4-201ENST00000289577 UBE2BP63146 152 aa12.97□□□□□ -0.33
TMED4-201ENST00000289577 MPLKIPQ8TAP9 179 aa12.97□□□□□ -0.33
TMED4-201ENST00000289577 LINC00588Q9Y4M8 146 aa12.97□□□□□ -0.33
TMED4-201ENST00000289577 TENM3Q9P273 2699 aa12.97□□□□□ -0.33
TMED4-201ENST00000289577 hDV103S1A0JD37 113 aa12.94□□□□□ -0.34
TMED4-201ENST00000289577 REG3GQ6UW15 175 aa12.94□□□□□ -0.34
TMED4-201ENST00000289577 LINC00476Q8WZB0 136 aa12.94□□□□□ -0.34
TMED4-201ENST00000289577 HCG22E2RYF7 251 aa12.92□□□□□ -0.34
TMED4-201ENST00000289577 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.9□□□□□ -0.34
TMED4-201ENST00000289577 CMYA5Q8N3K9 4069 aa12.89□□□□□ -0.35
TMED4-201ENST00000289577 IGFL1Q6UW32 110 aa12.89□□□□□ -0.35
TMED4-201ENST00000289577 BRK1Q8WUW1 75 aa12.89□□□□□ -0.35
TMED4-201ENST00000289577 HECTD1Q9ULT8 2610 aa12.88□□□□□ -0.35
TMED4-201ENST00000289577 PSCAO43653 123 aa12.88□□□□□ -0.35
TMED4-201ENST00000289577 KMT2BQ9UMN6 2715 aaPredicted RBP12.88□□□□□ -0.35
TMED4-201ENST00000289577 C1orf64Q8NEQ6 169 aa12.86□□□□□ -0.35
TMED4-201ENST00000289577 IGLV8-61A0A075B6I0 122 aa12.86□□□□□ -0.35
TMED4-201ENST00000289577 A0A0G2JQZ4 141 aa12.86□□□□□ -0.35
TMED4-201ENST00000289577 A0A1W2PNN7 141 aa12.86□□□□□ -0.35
TMED4-201ENST00000289577 DNAH3Q8TD57 4116 aa12.85□□□□□ -0.35
TMED4-201ENST00000289577 CYP4F30PQ9H0H9 118 aa12.82□□□□□ -0.36
TMED4-201ENST00000289577 Q1T7F1 81 aa12.81□□□□□ -0.36
TMED4-201ENST00000289577 PRLHP81277 87 aa12.78□□□□□ -0.36
TMED4-201ENST00000289577 DEFB116Q30KQ4 102 aa12.78□□□□□ -0.36
TMED4-201ENST00000289577 A0A087WSZ3 146 aa12.78□□□□□ -0.36
TMED4-201ENST00000289577 PKIGQ9Y2B9 76 aa12.77□□□□□ -0.36
TMED4-201ENST00000289577 A0A096LNI7 61 aa12.77□□□□□ -0.37
TMED4-201ENST00000289577 C16orf90A8MZG2 172 aa12.77□□□□□ -0.37
TMED4-201ENST00000289577 NDUFB1O75438 58 aa12.77□□□□□ -0.37
TMED4-201ENST00000289577 LRCOL1A6NCL2 159 aa12.76□□□□□ -0.37
TMED4-201ENST00000289577 WFDC13Q8IUB5 93 aa12.76□□□□□ -0.37
TMED4-201ENST00000289577 KRTAP29-1A8MX34 341 aaPredicted RBP12.75□□□□□ -0.37
TMED4-201ENST00000289577 MP68P56378 58 aa12.73□□□□□ -0.37
TMED4-201ENST00000289577 CNBPP62633 177 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms