RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 A0A1B0GU69 56 aa7.64□□□□□ -1.19
NPC1L1-201ENST00000289547 NBEAQ8NFP9 2946 aa7.64□□□□□ -1.19
NPC1L1-201ENST00000289547 UNC79Q9P2D8 2635 aa7.64□□□□□ -1.19
NPC1L1-201ENST00000289547 VPS13AQ96RL7 3174 aa7.63□□□□□ -1.19
NPC1L1-201ENST00000289547 H3BPC8 53 aa7.63□□□□□ -1.19
NPC1L1-201ENST00000289547 TRBV7-4A0A0J9YYF1 115 aa7.63□□□□□ -1.19
NPC1L1-201ENST00000289547 LINC01600Q96MT4 127 aa7.63□□□□□ -1.19
NPC1L1-201ENST00000289547 CYP4F30PQ9H0H9 118 aa7.63□□□□□ -1.19
NPC1L1-201ENST00000289547 C22orf24Q9Y442 160 aa7.63□□□□□ -1.19
NPC1L1-201ENST00000289547 DSPP15924 2871 aaKnown RBP7.63□□□□□ -1.19
NPC1L1-201ENST00000289547 FAM229AH3BQW9 127 aa7.62□□□□□ -1.19
NPC1L1-201ENST00000289547 TRIOO75962 3097 aa7.62□□□□□ -1.19
NPC1L1-201ENST00000289547 C8orf87E5RJ46 101 aa7.62□□□□□ -1.19
NPC1L1-201ENST00000289547 DNAH10OSP0CZ25 163 aa7.62□□□□□ -1.19
NPC1L1-201ENST00000289547 CHD6Q8TD26 2715 aa7.61□□□□□ -1.19
NPC1L1-201ENST00000289547 ATP11AUNQ6ZP68 121 aa7.6□□□□□ -1.19
NPC1L1-201ENST00000289547 VCANP13611 3396 aa7.6□□□□□ -1.19
NPC1L1-201ENST00000289547 K7EQZ3 153 aa7.6□□□□□ -1.19
NPC1L1-201ENST00000289547 GIG44P09565 113 aaPredicted RBP7.6□□□□□ -1.19
NPC1L1-201ENST00000289547 LINC00167Q96N53 147 aa7.6□□□□□ -1.19
NPC1L1-201ENST00000289547 KTN1-AS1Q86SY8 53 aa7.59□□□□□ -1.19
NPC1L1-201ENST00000289547 LINC00476Q8WZB0 136 aa7.59□□□□□ -1.19
NPC1L1-201ENST00000289547 IGLV6-57P01721 117 aa7.59□□□□□ -1.19
NPC1L1-201ENST00000289547 RPL37AP61513 92 aaKnown RBP7.59□□□□□ -1.19
NPC1L1-201ENST00000289547 TP53AIP1Q9HCN2 124 aa7.59□□□□□ -1.19
NPC1L1-201ENST00000289547 RTL8CO15255 209 aa7.59□□□□□ -1.19
NPC1L1-201ENST00000289547 VPREB1P12018 145 aa7.59□□□□□ -1.19
NPC1L1-201ENST00000289547 Q5XG85 94 aa7.59□□□□□ -1.19
NPC1L1-201ENST00000289547 ST20-AS1Q8NBB2 130 aa7.58□□□□□ -1.2
NPC1L1-201ENST00000289547 COA5Q86WW8 74 aa7.58□□□□□ -1.2
NPC1L1-201ENST00000289547 LINC00612Q8N6U2 182 aa7.58□□□□□ -1.2
NPC1L1-201ENST00000289547 CIRBP-AS1Q8TBR5 109 aa7.58□□□□□ -1.2
NPC1L1-201ENST00000289547 CYSTM1Q9H1C7 97 aa7.57□□□□□ -1.2
NPC1L1-201ENST00000289547 ACYP2P14621 99 aa7.57□□□□□ -1.2
NPC1L1-201ENST00000289547 COL6A3P12111 3177 aa7.57□□□□□ -1.2
NPC1L1-201ENST00000289547 LOC101927531A0A1B0GV80 90 aa7.57□□□□□ -1.2
NPC1L1-201ENST00000289547 APLNQ9ULZ1 77 aa7.57□□□□□ -1.2
NPC1L1-201ENST00000289547 Q6ZRX8 168 aa7.56□□□□□ -1.2
NPC1L1-201ENST00000289547 LAMA1P25391 3075 aa7.56□□□□□ -1.2
NPC1L1-201ENST00000289547 ATRQ13535 2644 aa7.56□□□□□ -1.2
NPC1L1-201ENST00000289547 CENPEQ02224 2701 aa7.55□□□□□ -1.2
NPC1L1-201ENST00000289547 FREM2Q5SZK8 3169 aa7.55□□□□□ -1.2
NPC1L1-201ENST00000289547 CELSR3Q9NYQ7 3312 aa7.55□□□□□ -1.2
NPC1L1-201ENST00000289547 ZNF575Q86XF7 245 aa7.55□□□□□ -1.2
NPC1L1-201ENST00000289547 SPEGQ15772 3267 aa7.54□□□□□ -1.2
NPC1L1-201ENST00000289547 C7orf65Q6ZTY9 151 aa7.54□□□□□ -1.2
NPC1L1-201ENST00000289547 PRR15Q8IV56 129 aa7.54□□□□□ -1.2
NPC1L1-201ENST00000289547 MAST4O15021 2626 aa7.53□□□□□ -1.2
NPC1L1-201ENST00000289547 PLA2G1BP04054 148 aaKnown RBP7.53□□□□□ -1.2
NPC1L1-201ENST00000289547 CASC10Q5T4H9 136 aa7.53□□□□□ -1.2
NPC1L1-201ENST00000289547 WDFY4Q6ZS81 3184 aa7.52□□□□□ -1.21
NPC1L1-201ENST00000289547 OBSCN-AS1Q96MR7 158 aa7.52□□□□□ -1.21
NPC1L1-201ENST00000289547 LCA10Q71F78 164 aa7.52□□□□□ -1.21
NPC1L1-201ENST00000289547 LINC00528Q8N1L1 170 aa7.51□□□□□ -1.21
NPC1L1-201ENST00000289547 IGKV2D-30A0A075B6S6 120 aa7.51□□□□□ -1.21
NPC1L1-201ENST00000289547 IGKV2-30P06310 120 aa7.51□□□□□ -1.21
NPC1L1-201ENST00000289547 IGLV8-61A0A075B6I0 122 aa7.51□□□□□ -1.21
NPC1L1-201ENST00000289547 FRYQ5TBA9 3013 aa7.51□□□□□ -1.21
NPC1L1-201ENST00000289547 MGAM2Q2M2H8 2515 aa7.5□□□□□ -1.21
NPC1L1-201ENST00000289547 GVQW2A0A096LPI5 108 aaPredicted RBP7.5□□□□□ -1.21
NPC1L1-201ENST00000289547 FP248Q71RG6 208 aaPredicted RBP7.49□□□□□ -1.21
NPC1L1-201ENST00000289547 Q6ZRP5 223 aa7.47□□□□□ -1.21
NPC1L1-201ENST00000289547 TEP1Q99973 2627 aaKnown RBP7.47□□□□□ -1.21
NPC1L1-201ENST00000289547 GCN1Q92616 2671 aaKnown RBP7.46□□□□□ -1.21
NPC1L1-201ENST00000289547 A8MWP4 228 aa7.46□□□□□ -1.22
NPC1L1-201ENST00000289547 OXTP01178 125 aa7.46□□□□□ -1.22
NPC1L1-201ENST00000289547 Q8N377 158 aa7.45□□□□□ -1.22
NPC1L1-201ENST00000289547 A0A087WTM6 91 aa7.45□□□□□ -1.22
NPC1L1-201ENST00000289547 Q1T7F1 81 aa7.44□□□□□ -1.22
NPC1L1-201ENST00000289547 OCR1Q9BZK8 76 aa7.44□□□□□ -1.22
NPC1L1-201ENST00000289547 FRYLO94915 3013 aa7.43□□□□□ -1.22
NPC1L1-201ENST00000289547 RBM12B-AS1Q9P1G2 102 aa7.43□□□□□ -1.22
NPC1L1-201ENST00000289547 UQCR11O14957 56 aa7.43□□□□□ -1.22
NPC1L1-201ENST00000289547 MOBPQ13875 183 aa7.42□□□□□ -1.22
NPC1L1-201ENST00000289547 SPTBN5Q9NRC6 3674 aaKnown RBP7.42□□□□□ -1.22
NPC1L1-201ENST00000289547 FAM229BQ4G0N7 80 aa7.42□□□□□ -1.22
NPC1L1-201ENST00000289547 KCNQ1DNQ9H478 68 aa7.42□□□□□ -1.22
NPC1L1-201ENST00000289547 A0A0G2JQZ4 141 aa7.41□□□□□ -1.22
NPC1L1-201ENST00000289547 A0A1W2PNN7 141 aa7.41□□□□□ -1.22
NPC1L1-201ENST00000289547 PRR34Q9NV39 138 aa7.41□□□□□ -1.22
NPC1L1-201ENST00000289547 CDC42SE1Q9NRR8 79 aa7.41□□□□□ -1.22
NPC1L1-201ENST00000289547 J3QL48 77 aa7.41□□□□□ -1.22
NPC1L1-201ENST00000289547 IGFL1Q6UW32 110 aa7.4□□□□□ -1.22
NPC1L1-201ENST00000289547 FAM168BA1KXE4 195 aa7.4□□□□□ -1.23
NPC1L1-201ENST00000289547 EPM2AB3EWF7 344 aa7.4□□□□□ -1.23
NPC1L1-201ENST00000289547 A0A1W2PNM2 257 aa7.39□□□□□ -1.23
NPC1L1-201ENST00000289547 USP34Q70CQ2 3546 aa7.39□□□□□ -1.23
NPC1L1-201ENST00000289547 FAM104AQ969W3 186 aa7.39□□□□□ -1.23
NPC1L1-201ENST00000289547 SPINT4Q6UDR6 99 aa7.38□□□□□ -1.23
NPC1L1-201ENST00000289547 PHF5AQ7RTV0 110 aaKnown RBP7.38□□□□□ -1.23
NPC1L1-201ENST00000289547 MIR22HGQ0VDD5 57 aa7.38□□□□□ -1.23
NPC1L1-201ENST00000289547 SPANXA2-OT1Q8N9U9 137 aa7.37□□□□□ -1.23
NPC1L1-201ENST00000289547 MRPL34Q9BQ48 92 aaKnown RBP7.37□□□□□ -1.23
NPC1L1-201ENST00000289547 IGLV1-50A0A075B6I6 118 aa7.37□□□□□ -1.23
NPC1L1-201ENST00000289547 LCE6AA0A183 80 aa7.35□□□□□ -1.23
NPC1L1-201ENST00000289547 COL6A5A8TX70 2615 aa7.35□□□□□ -1.23
NPC1L1-201ENST00000289547 SSBP3-AS1Q7Z2R9 100 aa7.35□□□□□ -1.23
NPC1L1-201ENST00000289547 C9orf163Q8N9P6 203 aa7.34□□□□□ -1.23
NPC1L1-201ENST00000289547 SETXQ7Z333 2677 aaKnown RBP7.33□□□□□ -1.24
NPC1L1-201ENST00000289547 CHTF8P0CG12 524 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms