RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 FAM229BQ4G0N7 80 aa5.66□□□□□ -1.5
LRTM1-201ENST00000273286 LINC01545Q5VT33 79 aa5.66□□□□□ -1.5
LRTM1-201ENST00000273286 SMIM1B2RUZ4 78 aa5.65□□□□□ -1.5
LRTM1-201ENST00000273286 UBE2AP49459 152 aa5.65□□□□□ -1.5
LRTM1-201ENST00000273286 SFTA2Q6UW10 78 aa5.65□□□□□ -1.5
LRTM1-201ENST00000273286 NKAPP1Q8N9T2 125 aa5.65□□□□□ -1.5
LRTM1-201ENST00000273286 COX7B2Q8TF08 81 aa5.65□□□□□ -1.5
LRTM1-201ENST00000273286 LINC00167Q96N53 147 aa5.65□□□□□ -1.5
LRTM1-201ENST00000273286 SPINK8P0C7L1 97 aa5.65□□□□□ -1.51
LRTM1-201ENST00000273286 TMEM223A0PJW6 202 aa5.64□□□□□ -1.51
LRTM1-201ENST00000273286 RPL37AP8A6NKH3 93 aa5.64□□□□□ -1.51
LRTM1-201ENST00000273286 PMCHL2Q9BQD1 86 aa5.64□□□□□ -1.51
LRTM1-201ENST00000273286 HSBP1L1C9JCN9 74 aa5.63□□□□□ -1.51
LRTM1-201ENST00000273286 TPRXLQ17RH7 258 aa5.63□□□□□ -1.51
LRTM1-201ENST00000273286 KRTAP13-1Q8IUC0 172 aa5.63□□□□□ -1.51
LRTM1-201ENST00000273286 LINC00304Q8N9R0 145 aa5.63□□□□□ -1.51
LRTM1-201ENST00000273286 PLEKHB2Q96CS7 222 aa5.63□□□□□ -1.51
LRTM1-201ENST00000273286 IGKV2D-26A0A0A0MRZ7 120 aa5.62□□□□□ -1.51
LRTM1-201ENST00000273286 GAGE10A6NGK3 116 aa5.62□□□□□ -1.51
LRTM1-201ENST00000273286 SCGB1D1O95968 90 aa5.62□□□□□ -1.51
LRTM1-201ENST00000273286 LEPROTO15243 131 aa5.61□□□□□ -1.51
LRTM1-201ENST00000273286 RPL24P83731 157 aaKnown RBP5.61□□□□□ -1.51
LRTM1-201ENST00000273286 COX17Q14061 63 aa5.61□□□□□ -1.51
LRTM1-201ENST00000273286 LITAFQ99732 161 aa5.61□□□□□ -1.51
LRTM1-201ENST00000273286 E9PLD3 99 aa5.6□□□□□ -1.51
LRTM1-201ENST00000273286 LGALS3P17931 250 aaKnown RBP5.6□□□□□ -1.51
LRTM1-201ENST00000273286 NMUP48645 174 aa5.6□□□□□ -1.51
LRTM1-201ENST00000273286 KRTAP13-2Q52LG2 175 aa5.6□□□□□ -1.51
LRTM1-201ENST00000273286 IGKV2-28A0A075B6P5 120 aa5.59□□□□□ -1.51
LRTM1-201ENST00000273286 MYMXA0A1B0GTQ4 84 aa5.59□□□□□ -1.51
LRTM1-201ENST00000273286 LINC00587B1AMM8 73 aa5.59□□□□□ -1.51
LRTM1-201ENST00000273286 J3QQQ9 107 aa5.59□□□□□ -1.51
LRTM1-201ENST00000273286 IGKV2D-28P01615 120 aa5.59□□□□□ -1.51
LRTM1-201ENST00000273286 HERV-K104P63124 156 aa5.59□□□□□ -1.51
LRTM1-201ENST00000273286 JOSD1Q15040 202 aaPredicted RBP5.58□□□□□ -1.52
LRTM1-201ENST00000273286 SPAG11AQ6PDA7 123 aa5.58□□□□□ -1.52
LRTM1-201ENST00000273286 FAM19A1Q7Z5A9 133 aa5.58□□□□□ -1.52
LRTM1-201ENST00000273286 ATOH7Q8N100 152 aa5.58□□□□□ -1.52
LRTM1-201ENST00000273286 TMEM126AQ9H061 195 aa5.58□□□□□ -1.52
LRTM1-201ENST00000273286 ANAPC11Q9NYG5 84 aa5.58□□□□□ -1.52
LRTM1-201ENST00000273286 NDUFA12Q9UI09 145 aa5.58□□□□□ -1.52
LRTM1-201ENST00000273286 IGLV7-46A0A075B6I9 117 aa5.57□□□□□ -1.52
LRTM1-201ENST00000273286 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
LRTM1-201ENST00000273286 VPREB1P12018 145 aa5.57□□□□□ -1.52
LRTM1-201ENST00000273286 PFN2P35080 140 aa5.57□□□□□ -1.52
LRTM1-201ENST00000273286 PRLHP81277 87 aa5.57□□□□□ -1.52
LRTM1-201ENST00000273286 ZNF625Q96I27 306 aaPredicted RBP5.57□□□□□ -1.52
LRTM1-201ENST00000273286 RETNLBQ9BQ08 111 aa5.57□□□□□ -1.52
LRTM1-201ENST00000273286 SND1-IT1Q9HBX3 110 aa5.57□□□□□ -1.52
LRTM1-201ENST00000273286 ERG28Q9UKR5 140 aa5.57□□□□□ -1.52
LRTM1-201ENST00000273286 FAT4Q6V0I7 4981 aa5.57□□□□□ -1.52
LRTM1-201ENST00000273286 MEIG1Q5JSS6 88 aa5.56□□□□□ -1.52
LRTM1-201ENST00000273286 FP248Q71RG6 208 aaPredicted RBP5.56□□□□□ -1.52
LRTM1-201ENST00000273286 VAMP8Q9BV40 100 aa5.56□□□□□ -1.52
LRTM1-201ENST00000273286 ZNF706Q9Y5V0 76 aaPredicted RBP5.56□□□□□ -1.52
LRTM1-201ENST00000273286 ZNF815PA8K554 130 aa5.55□□□□□ -1.52
LRTM1-201ENST00000273286 M0R378 163 aa5.55□□□□□ -1.52
LRTM1-201ENST00000273286 TSPEAR-AS2P59090 65 aa5.55□□□□□ -1.52
LRTM1-201ENST00000273286 S100A12P80511 92 aa5.54□□□□□ -1.52
LRTM1-201ENST00000273286 TMEM238C9JI98 176 aa5.53□□□□□ -1.52
LRTM1-201ENST00000273286 LINC00158P58513 81 aa5.53□□□□□ -1.52
LRTM1-201ENST00000273286 PYY3Q5JQD4 70 aa5.53□□□□□ -1.52
LRTM1-201ENST00000273286 SCGB1D4Q6XE38 83 aa5.53□□□□□ -1.52
LRTM1-201ENST00000273286 HIGD2AQ9BW72 106 aa5.53□□□□□ -1.52
LRTM1-201ENST00000273286 PPDPFQ9H3Y8 114 aa5.53□□□□□ -1.52
LRTM1-201ENST00000273286 A0A0J9YXY3 114 aa5.51□□□□□ -1.53
LRTM1-201ENST00000273286 TIMM17BO60830 172 aa5.51□□□□□ -1.53
LRTM1-201ENST00000273286 SMIM6P0DI80 62 aa5.51□□□□□ -1.53
LRTM1-201ENST00000273286 SPATA45Q537H7 98 aa5.51□□□□□ -1.53
LRTM1-201ENST00000273286 LINC00337Q8N6G1 96 aa5.51□□□□□ -1.53
LRTM1-201ENST00000273286 COPS9Q8WXC6 57 aa5.51□□□□□ -1.53
LRTM1-201ENST00000273286 MIEN1Q9BRT3 115 aa5.51□□□□□ -1.53
LRTM1-201ENST00000273286 SMIM13P0DJ93 91 aa5.5□□□□□ -1.53
LRTM1-201ENST00000273286 C3orf22Q8N5N4 141 aa5.5□□□□□ -1.53
LRTM1-201ENST00000273286 SPRR4Q96PI1 79 aa5.5□□□□□ -1.53
LRTM1-201ENST00000273286 SPINK1P00995 79 aa5.49□□□□□ -1.53
LRTM1-201ENST00000273286 COX8AP10176 69 aa5.49□□□□□ -1.53
LRTM1-201ENST00000273286 PCP2Q8IVA1 136 aa5.49□□□□□ -1.53
LRTM1-201ENST00000273286 A0A0U1RRA0 63 aa5.48□□□□□ -1.53
LRTM1-201ENST00000273286 DLEU1O43261 78 aa5.48□□□□□ -1.53
LRTM1-201ENST00000273286 Q6ZVH6 145 aa5.48□□□□□ -1.53
LRTM1-201ENST00000273286 MIR7-3HGQ8N6C7 128 aa5.48□□□□□ -1.53
LRTM1-201ENST00000273286 TTTY13Q9BZ97 58 aa5.48□□□□□ -1.53
LRTM1-201ENST00000273286 MUC17Q685J3 4493 aa5.48□□□□□ -1.53
LRTM1-201ENST00000273286 LOC105371267A0A1B0GV96 52 aa5.48□□□□□ -1.53
LRTM1-201ENST00000273286 RPS29P62273 56 aaKnown RBP5.48□□□□□ -1.53
LRTM1-201ENST00000273286 SLC25A34Q6PIV7 304 aa5.48□□□□□ -1.53
LRTM1-201ENST00000273286 BOD1L2Q8IYS8 172 aa5.48□□□□□ -1.53
LRTM1-201ENST00000273286 SPRR1AP35321 89 aa5.47□□□□□ -1.53
LRTM1-201ENST00000273286 ASB16-AS1Q495Z4 193 aa5.47□□□□□ -1.53
LRTM1-201ENST00000273286 Q8NDZ9 215 aa5.47□□□□□ -1.53
LRTM1-201ENST00000273286 KRTAP4-4Q9BYR3 166 aa5.47□□□□□ -1.53
LRTM1-201ENST00000273286 KCNQ1DNQ9H478 68 aa5.47□□□□□ -1.53
LRTM1-201ENST00000273286 ETDCA0A1B0GVM5 59 aa5.46□□□□□ -1.54
LRTM1-201ENST00000273286 IFITM1P13164 125 aa5.46□□□□□ -1.54
LRTM1-201ENST00000273286 KRTAP13-3Q3SY46 172 aa5.46□□□□□ -1.54
LRTM1-201ENST00000273286 KRTAP5-4Q6L8H1 288 aa5.46□□□□□ -1.54
LRTM1-201ENST00000273286 Q8NBF4 154 aa5.46□□□□□ -1.54
LRTM1-201ENST00000273286 C14orf144Q96I85 54 aa5.46□□□□□ -1.54
LRTM1-201ENST00000273286 SPANXDQ9BXN6 97 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms