RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 EPM2AB3EWF7 344 aa18.04■□□□□ 0.48
CBX4-201ENST00000269397 TENM3Q9P273 2699 aa18.03■□□□□ 0.48
CBX4-201ENST00000269397 IGKV2D-24A0A075B6R9 120 aa18.02■□□□□ 0.48
CBX4-201ENST00000269397 IGKV4-1P06312 121 aa18.01■□□□□ 0.47
CBX4-201ENST00000269397 ESRGQ1W209 222 aa18.01■□□□□ 0.47
CBX4-201ENST00000269397 C1orf43Q9BWL3 253 aa18■□□□□ 0.47
CBX4-201ENST00000269397 SERTAD4-AS1Q5TG53 156 aa17.99■□□□□ 0.47
CBX4-201ENST00000269397 TMEM254Q8TBM7 123 aa17.99■□□□□ 0.47
CBX4-201ENST00000269397 Q8N377 158 aa17.95■□□□□ 0.46
CBX4-201ENST00000269397 NKAPP1Q8N9T2 125 aa17.95■□□□□ 0.46
CBX4-201ENST00000269397 SYCNQ0VAF6 134 aa17.95■□□□□ 0.46
CBX4-201ENST00000269397 C7orf33Q8WU49 177 aa17.94■□□□□ 0.46
CBX4-201ENST00000269397 FP248Q71RG6 208 aaPredicted RBP17.93■□□□□ 0.46
CBX4-201ENST00000269397 RPL37AP8A6NKH3 93 aa17.92■□□□□ 0.46
CBX4-201ENST00000269397 KMT2BQ9UMN6 2715 aaPredicted RBP17.92■□□□□ 0.46
CBX4-201ENST00000269397 LINC00474Q9P2X8 69 aa17.92■□□□□ 0.46
CBX4-201ENST00000269397 OXLD1Q5BKU9 147 aa17.91■□□□□ 0.46
CBX4-201ENST00000269397 WIPF1O43516 503 aa17.9■□□□□ 0.46
CBX4-201ENST00000269397 NDUFC1O43677 76 aa17.9■□□□□ 0.46
CBX4-201ENST00000269397 KCNQ1DNQ9H478 68 aa17.9■□□□□ 0.46
CBX4-201ENST00000269397 OCR1Q9BZK8 76 aa17.88■□□□□ 0.45
CBX4-201ENST00000269397 ANK2Q01484 3957 aa17.88■□□□□ 0.45
CBX4-201ENST00000269397 FAM168BA1KXE4 195 aa17.86■□□□□ 0.45
CBX4-201ENST00000269397 H3BNG1 76 aa17.86■□□□□ 0.45
CBX4-201ENST00000269397 SMIM26A0A096LP01 95 aa17.85■□□□□ 0.45
CBX4-201ENST00000269397 LINC00336Q6ZUF6 198 aa17.85■□□□□ 0.45
CBX4-201ENST00000269397 F8P00451 2351 aa17.83■□□□□ 0.45
CBX4-201ENST00000269397 ST20-AS1Q8NBB2 130 aa17.83■□□□□ 0.44
CBX4-201ENST00000269397 HIGD2AQ9BW72 106 aa17.82■□□□□ 0.44
CBX4-201ENST00000269397 Q9BRP9 147 aa17.82■□□□□ 0.44
CBX4-201ENST00000269397 IGLV5-48A0A075B6I7 105 aa17.81■□□□□ 0.44
CBX4-201ENST00000269397 KRTAP10-11P60412 298 aa17.81■□□□□ 0.44
CBX4-201ENST00000269397 LINC01556Q5JQF7 62 aa17.81■□□□□ 0.44
CBX4-201ENST00000269397 BAHCC1Q9P281 2608 aa17.8■□□□□ 0.44
CBX4-201ENST00000269397 A0A1W2PNM2 257 aa17.8■□□□□ 0.44
CBX4-201ENST00000269397 PRYO14603 147 aa17.8■□□□□ 0.44
CBX4-201ENST00000269397 A0A0U1RQV1 116 aa17.79■□□□□ 0.44
CBX4-201ENST00000269397 FLNBO75369 2602 aaKnown RBP17.79■□□□□ 0.44
CBX4-201ENST00000269397 ERC2-IT1O76042 136 aa17.79■□□□□ 0.44
CBX4-201ENST00000269397 FAM30AQ9NZY2 134 aa17.79■□□□□ 0.44
CBX4-201ENST00000269397 SMIM29Q86T20 159 aa17.78■□□□□ 0.44
CBX4-201ENST00000269397 DEFB131BA0A096LNP1 70 aa17.78■□□□□ 0.44
CBX4-201ENST00000269397 FAM229BQ4G0N7 80 aa17.78■□□□□ 0.44
CBX4-201ENST00000269397 Q6ZRX8 168 aa17.78■□□□□ 0.44
CBX4-201ENST00000269397 FUSP35637 526 aaKnown RBP eCLIP17.77■□□□□ 0.441e-6■■■■□ 21.4
CBX4-201ENST00000269397 CASC10Q5T4H9 136 aa17.75■□□□□ 0.43
CBX4-201ENST00000269397 C1orf137Q5JT78 98 aa17.75■□□□□ 0.43
CBX4-201ENST00000269397 ATP5EP56381 51 aaPredicted RBP17.74■□□□□ 0.43
CBX4-201ENST00000269397 ETDCA0A1B0GVM5 59 aa17.73■□□□□ 0.43
CBX4-201ENST00000269397 DHRS4-AS1Q9P1J3 65 aa17.72■□□□□ 0.43
CBX4-201ENST00000269397 KRTAP4-16G5E9R7 235 aaPredicted RBP17.71■□□□□ 0.43
CBX4-201ENST00000269397 IGLV1-50A0A075B6I6 118 aa17.7■□□□□ 0.42
CBX4-201ENST00000269397 MPLKIPQ8TAP9 179 aa17.7■□□□□ 0.42
CBX4-201ENST00000269397 KRTAP7-1Q8IUC3 87 aa17.69■□□□□ 0.42
CBX4-201ENST00000269397 C11orf45Q8TAV5 145 aa17.68■□□□□ 0.42
CBX4-201ENST00000269397 MAST4O15021 2626 aa17.68■□□□□ 0.42
CBX4-201ENST00000269397 F8WDY8 70 aa17.67■□□□□ 0.42
CBX4-201ENST00000269397 TNP2Q05952 138 aa17.67■□□□□ 0.42
CBX4-201ENST00000269397 A0A0G2JQZ4 141 aa17.66■□□□□ 0.42
CBX4-201ENST00000269397 A0A1W2PNN7 141 aa17.66■□□□□ 0.42
CBX4-201ENST00000269397 NOTCH1P46531 2555 aa17.66■□□□□ 0.42
CBX4-201ENST00000269397 STAB1Q9NY15 2570 aa17.66■□□□□ 0.42
CBX4-201ENST00000269397 Q8NBF4 154 aa17.65■□□□□ 0.42
CBX4-201ENST00000269397 UBE2BP63146 152 aa17.63■□□□□ 0.41
CBX4-201ENST00000269397 TLX1NBP0CAT3 122 aa17.63■□□□□ 0.41
CBX4-201ENST00000269397 DNAH10OSP0CZ25 163 aa17.63■□□□□ 0.41
CBX4-201ENST00000269397 PRO0628Q9UI54 55 aa17.63■□□□□ 0.41
CBX4-201ENST00000269397 SPRR1AP35321 89 aa17.62■□□□□ 0.41
CBX4-201ENST00000269397 K7EQZ3 153 aa17.61■□□□□ 0.41
CBX4-201ENST00000269397 DSCR10P59022 87 aa17.61■□□□□ 0.41
CBX4-201ENST00000269397 MRAPQ8TCY5 172 aa17.6■□□□□ 0.41
CBX4-201ENST00000269397 PLA2G2DQ9UNK4 145 aa17.6■□□□□ 0.41
CBX4-201ENST00000269397 FBN1P35555 2871 aaKnown RBP17.6■□□□□ 0.41
CBX4-201ENST00000269397 MRPL55Q7Z7F7 128 aaKnown RBP17.57■□□□□ 0.4
CBX4-201ENST00000269397 LINC00588Q9Y4M8 146 aa17.56■□□□□ 0.4
CBX4-201ENST00000269397 SPRR4Q96PI1 79 aa17.55■□□□□ 0.4
CBX4-201ENST00000269397 DEFB116Q30KQ4 102 aa17.55■□□□□ 0.4
CBX4-201ENST00000269397 IGLV5-37A0A075B6J1 123 aa17.54■□□□□ 0.4
CBX4-201ENST00000269397 LRCOL1A6NCL2 159 aa17.53■□□□□ 0.4
CBX4-201ENST00000269397 BRK1Q8WUW1 75 aa17.53■□□□□ 0.4
CBX4-201ENST00000269397 A0A1B0GW54 56 aa17.52■□□□□ 0.39
CBX4-201ENST00000269397 LINC00476Q8WZB0 136 aa17.5■□□□□ 0.39
CBX4-201ENST00000269397 REG3GQ6UW15 175 aa17.46■□□□□ 0.39
CBX4-201ENST00000269397 LCE6AA0A183 80 aa17.46■□□□□ 0.39
CBX4-201ENST00000269397 SRRM2Q9UQ35 2752 aaKnown RBP17.46■□□□□ 0.39
CBX4-201ENST00000269397 PKIGQ9Y2B9 76 aa17.45■□□□□ 0.38
CBX4-201ENST00000269397 PRR4Q16378 134 aa17.44■□□□□ 0.38
CBX4-201ENST00000269397 PRLHP81277 87 aa17.43■□□□□ 0.38
CBX4-201ENST00000269397 COL6A5A8TX70 2615 aa17.43■□□□□ 0.38
CBX4-201ENST00000269397 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.43■□□□□ 0.38
CBX4-201ENST00000269397 PSCAO43653 123 aa17.43■□□□□ 0.38
CBX4-201ENST00000269397 CMYA5Q8N3K9 4069 aa17.42■□□□□ 0.38
CBX4-201ENST00000269397 PRB2P02812 416 aaPredicted RBP17.42■□□□□ 0.38
CBX4-201ENST00000269397 IGFL1Q6UW32 110 aa17.41■□□□□ 0.38
CBX4-201ENST00000269397 NBEAL1Q6ZS30 2694 aa17.4■□□□□ 0.38
CBX4-201ENST00000269397 HCG22E2RYF7 251 aa17.4■□□□□ 0.38
CBX4-201ENST00000269397 IGKV2-24A0A0C4DH68 120 aa17.39■□□□□ 0.37
CBX4-201ENST00000269397 DNAH1Q9P2D7 4330 aa17.39■□□□□ 0.37
CBX4-201ENST00000269397 hDV103S1A0JD37 113 aa17.39■□□□□ 0.37
CBX4-201ENST00000269397 ZCCHC13Q8WW36 166 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms