RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 KRTAP26-1Q6PEX3 210 aa11.26□□□□□ -0.61
SPG7-201ENST00000268704 PRO0628Q9UI54 55 aa11.25□□□□□ -0.61
SPG7-201ENST00000268704 KPRPQ5T749 579 aaPredicted RBP11.25□□□□□ -0.61
SPG7-201ENST00000268704 LINC00528Q8N1L1 170 aa11.24□□□□□ -0.61
SPG7-201ENST00000268704 Q6ZRP5 223 aa11.24□□□□□ -0.61
SPG7-201ENST00000268704 SERP1Q9Y6X1 66 aa11.24□□□□□ -0.61
SPG7-201ENST00000268704 M0R378 163 aa11.24□□□□□ -0.61
SPG7-201ENST00000268704 KLKP1Q107X0 134 aa11.23□□□□□ -0.61
SPG7-201ENST00000268704 MRAPQ8TCY5 172 aa11.23□□□□□ -0.61
SPG7-201ENST00000268704 EGFEM1PQ0D2K5 195 aa11.22□□□□□ -0.61
SPG7-201ENST00000268704 TRBV7-6A0A0J9YX20 115 aa11.22□□□□□ -0.61
SPG7-201ENST00000268704 H3BQ85 93 aa11.22□□□□□ -0.61
SPG7-201ENST00000268704 FAM229BQ4G0N7 80 aa11.22□□□□□ -0.61
SPG7-201ENST00000268704 Q6ZTC4 211 aa11.22□□□□□ -0.61
SPG7-201ENST00000268704 DEFB105AQ8NG35 78 aa11.22□□□□□ -0.61
SPG7-201ENST00000268704 C3orf84H3BNL1 204 aa11.21□□□□□ -0.62
SPG7-201ENST00000268704 LRCOL1A6NCL2 159 aa11.2□□□□□ -0.62
SPG7-201ENST00000268704 BCE1O60756 84 aa11.2□□□□□ -0.62
SPG7-201ENST00000268704 BPY2O14599 106 aa11.19□□□□□ -0.62
SPG7-201ENST00000268704 ESRGQ1W209 222 aa11.18□□□□□ -0.62
SPG7-201ENST00000268704 IGKV2D-24A0A075B6R9 120 aa11.18□□□□□ -0.62
SPG7-201ENST00000268704 NREPQ16612 68 aa11.17□□□□□ -0.62
SPG7-201ENST00000268704 SERTAD4-AS1Q5TG53 156 aa11.17□□□□□ -0.62
SPG7-201ENST00000268704 PRB2P02812 416 aaPredicted RBP11.15□□□□□ -0.62
SPG7-201ENST00000268704 OXLD1Q5BKU9 147 aa11.15□□□□□ -0.62
SPG7-201ENST00000268704 IGKV4-1P06312 121 aa11.14□□□□□ -0.63
SPG7-201ENST00000268704 SMIM26A0A096LP01 95 aa11.14□□□□□ -0.63
SPG7-201ENST00000268704 RPL37AP8A6NKH3 93 aa11.12□□□□□ -0.63
SPG7-201ENST00000268704 EPM2AB3EWF7 344 aa11.12□□□□□ -0.63
SPG7-201ENST00000268704 C7orf33Q8WU49 177 aa11.12□□□□□ -0.63
SPG7-201ENST00000268704 SYCNQ0VAF6 134 aa11.12□□□□□ -0.63
SPG7-201ENST00000268704 Q8N377 158 aa11.12□□□□□ -0.63
SPG7-201ENST00000268704 NKAPP1Q8N9T2 125 aa11.12□□□□□ -0.63
SPG7-201ENST00000268704 TMEM254Q8TBM7 123 aa11.11□□□□□ -0.63
SPG7-201ENST00000268704 FAM168BA1KXE4 195 aa11.1□□□□□ -0.63
SPG7-201ENST00000268704 KRTAP10-11P60412 298 aa11.09□□□□□ -0.63
SPG7-201ENST00000268704 NOTCH1P46531 2555 aa11.08□□□□□ -0.64
SPG7-201ENST00000268704 KCNQ1DNQ9H478 68 aa11.08□□□□□ -0.64
SPG7-201ENST00000268704 H3BNG1 76 aa11.07□□□□□ -0.64
SPG7-201ENST00000268704 ST20-AS1Q8NBB2 130 aa11.06□□□□□ -0.64
SPG7-201ENST00000268704 Q9BRP9 147 aa11.05□□□□□ -0.64
SPG7-201ENST00000268704 OCR1Q9BZK8 76 aa11.05□□□□□ -0.64
SPG7-201ENST00000268704 CASC10Q5T4H9 136 aa11.05□□□□□ -0.64
SPG7-201ENST00000268704 C1orf195Q5TG92 126 aa11.05□□□□□ -0.64
SPG7-201ENST00000268704 LINC01556Q5JQF7 62 aa11.05□□□□□ -0.64
SPG7-201ENST00000268704 STAB1Q9NY15 2570 aa11.04□□□□□ -0.64
SPG7-201ENST00000268704 DEFB131BA0A096LNP1 70 aa11.04□□□□□ -0.64
SPG7-201ENST00000268704 HIGD2AQ9BW72 106 aa11.03□□□□□ -0.64
SPG7-201ENST00000268704 A0A1W2PNM2 257 aa11.03□□□□□ -0.64
SPG7-201ENST00000268704 PRR4Q16378 134 aa11.02□□□□□ -0.65
SPG7-201ENST00000268704 IGLV5-48A0A075B6I7 105 aa11.02□□□□□ -0.65
SPG7-201ENST00000268704 NDUFC1O43677 76 aa11.02□□□□□ -0.65
SPG7-201ENST00000268704 FBN1P35555 2871 aaKnown RBP11.01□□□□□ -0.65
SPG7-201ENST00000268704 Q6ZRX8 168 aa11.01□□□□□ -0.65
SPG7-201ENST00000268704 SMIM29Q86T20 159 aa11□□□□□ -0.65
SPG7-201ENST00000268704 KRTAP7-1Q8IUC3 87 aa11□□□□□ -0.65
SPG7-201ENST00000268704 FAM30AQ9NZY2 134 aa11□□□□□ -0.65
SPG7-201ENST00000268704 PRYO14603 147 aa10.99□□□□□ -0.65
SPG7-201ENST00000268704 ERC2-IT1O76042 136 aa10.99□□□□□ -0.65
SPG7-201ENST00000268704 NBEAL1Q6ZS30 2694 aa10.98□□□□□ -0.65
SPG7-201ENST00000268704 KRTAP4-16G5E9R7 235 aaPredicted RBP10.98□□□□□ -0.65
SPG7-201ENST00000268704 FUSP35637 526 aaKnown RBP eCLIP10.98□□□□□ -0.652e-6■■■□□ 16.4
SPG7-201ENST00000268704 C1orf137Q5JT78 98 aa10.98□□□□□ -0.65
SPG7-201ENST00000268704 C11orf45Q8TAV5 145 aa10.98□□□□□ -0.65
SPG7-201ENST00000268704 V9GYY9 64 aa10.98□□□□□ -0.65
SPG7-201ENST00000268704 CMYA5Q8N3K9 4069 aa10.98□□□□□ -0.65
SPG7-201ENST00000268704 A0A0G2JQZ4 141 aa10.97□□□□□ -0.65
SPG7-201ENST00000268704 ETDCA0A1B0GVM5 59 aa10.97□□□□□ -0.65
SPG7-201ENST00000268704 A0A1W2PNN7 141 aa10.97□□□□□ -0.65
SPG7-201ENST00000268704 COL6A5A8TX70 2615 aa10.97□□□□□ -0.65
SPG7-201ENST00000268704 SEC61GP60059 68 aa10.97□□□□□ -0.65
SPG7-201ENST00000268704 IGLV1-50A0A075B6I6 118 aa10.96□□□□□ -0.65
SPG7-201ENST00000268704 DHRS4-AS1Q9P1J3 65 aa10.95□□□□□ -0.66
SPG7-201ENST00000268704 DNAH1Q9P2D7 4330 aa10.95□□□□□ -0.66
SPG7-201ENST00000268704 TNP2Q05952 138 aa10.95□□□□□ -0.66
SPG7-201ENST00000268704 PSPHP1O15172 72 aa10.93□□□□□ -0.66
SPG7-201ENST00000268704 DNAH10OSP0CZ25 163 aa10.93□□□□□ -0.66
SPG7-201ENST00000268704 CSMD3Q7Z407 3707 aa10.92□□□□□ -0.66
SPG7-201ENST00000268704 Q8NBF4 154 aa10.92□□□□□ -0.66
SPG7-201ENST00000268704 UBE2BP63146 152 aa10.92□□□□□ -0.66
SPG7-201ENST00000268704 LYSTQ99698 3801 aa10.91□□□□□ -0.66
SPG7-201ENST00000268704 F8WDY8 70 aa10.91□□□□□ -0.66
SPG7-201ENST00000268704 TLX1NBP0CAT3 122 aa10.91□□□□□ -0.66
SPG7-201ENST00000268704 SPRR1AP35321 89 aa10.91□□□□□ -0.66
SPG7-201ENST00000268704 ATP5EP56381 51 aaPredicted RBP10.91□□□□□ -0.66
SPG7-201ENST00000268704 K7EQZ3 153 aa10.91□□□□□ -0.66
SPG7-201ENST00000268704 LINC00588Q9Y4M8 146 aa10.91□□□□□ -0.66
SPG7-201ENST00000268704 DSCR10P59022 87 aa10.9□□□□□ -0.66
SPG7-201ENST00000268704 DNAH10Q8IVF4 4471 aa10.89□□□□□ -0.67
SPG7-201ENST00000268704 MRPL55Q7Z7F7 128 aaKnown RBP10.89□□□□□ -0.67
SPG7-201ENST00000268704 PLA2G2DQ9UNK4 145 aa10.89□□□□□ -0.67
SPG7-201ENST00000268704 DEFB116Q30KQ4 102 aa10.88□□□□□ -0.67
SPG7-201ENST00000268704 SRRM2Q9UQ35 2752 aaKnown RBP10.87□□□□□ -0.67
SPG7-201ENST00000268704 KRTAP24-1Q3LI83 254 aa10.87□□□□□ -0.67
SPG7-201ENST00000268704 A8MU10 97 aa10.87□□□□□ -0.67
SPG7-201ENST00000268704 IGLV5-37A0A075B6J1 123 aa10.86□□□□□ -0.67
SPG7-201ENST00000268704 SPRR4Q96PI1 79 aa10.86□□□□□ -0.67
SPG7-201ENST00000268704 LINC00476Q8WZB0 136 aa10.84□□□□□ -0.67
SPG7-201ENST00000268704 PRLHP81277 87 aa10.82□□□□□ -0.68
SPG7-201ENST00000268704 REG3GQ6UW15 175 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms