RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 NSD1Q96L73 2696 aaPredicted RBP9.97□□□□□ -0.81
XRCC1-201ENST00000262887 BAHCC1Q9P281 2608 aa9.97□□□□□ -0.81
XRCC1-201ENST00000262887 DAD1P61803 113 aa9.97□□□□□ -0.81
XRCC1-201ENST00000262887 KRTAP1-3Q8IUG1 177 aa9.97□□□□□ -0.81
XRCC1-201ENST00000262887 J3QKU1 62 aa9.97□□□□□ -0.81
XRCC1-201ENST00000262887 ATRQ13535 2644 aa9.96□□□□□ -0.81
XRCC1-201ENST00000262887 HIGD2AQ9BW72 106 aa9.96□□□□□ -0.81
XRCC1-201ENST00000262887 CD164Q04900 197 aa9.96□□□□□ -0.82
XRCC1-201ENST00000262887 PRR34Q9NV39 138 aa9.96□□□□□ -0.82
XRCC1-201ENST00000262887 DEFB135Q30KP9 77 aa9.95□□□□□ -0.82
XRCC1-201ENST00000262887 LELP1Q5T871 98 aa9.95□□□□□ -0.82
XRCC1-201ENST00000262887 VPREB1P12018 145 aa9.94□□□□□ -0.82
XRCC1-201ENST00000262887 F8P00451 2351 aa9.94□□□□□ -0.82
XRCC1-201ENST00000262887 LINC00528Q8N1L1 170 aa9.94□□□□□ -0.82
XRCC1-201ENST00000262887 CELA1Q9UNI1 258 aa9.94□□□□□ -0.82
XRCC1-201ENST00000262887 HIGD2BQ4VC39 106 aa9.93□□□□□ -0.82
XRCC1-201ENST00000262887 RETNQ9HD89 108 aa9.93□□□□□ -0.82
XRCC1-201ENST00000262887 HTN3P15516 51 aa9.93□□□□□ -0.82
XRCC1-201ENST00000262887 Q1T7F1 81 aa9.93□□□□□ -0.82
XRCC1-201ENST00000262887 C3orf84H3BNL1 204 aa9.92□□□□□ -0.82
XRCC1-201ENST00000262887 M0R378 163 aa9.92□□□□□ -0.82
XRCC1-201ENST00000262887 hDV103S1A0JD37 113 aa9.92□□□□□ -0.82
XRCC1-201ENST00000262887 CAMK2N2Q96S95 79 aa9.92□□□□□ -0.82
XRCC1-201ENST00000262887 MAST4O15021 2626 aa9.91□□□□□ -0.82
XRCC1-201ENST00000262887 Q6ZRP5 223 aa9.91□□□□□ -0.82
XRCC1-201ENST00000262887 LRCOL1A6NCL2 159 aa9.88□□□□□ -0.83
XRCC1-201ENST00000262887 FAM30AQ9NZY2 134 aa9.88□□□□□ -0.83
XRCC1-201ENST00000262887 SMIM29Q86T20 159 aa9.87□□□□□ -0.83
XRCC1-201ENST00000262887 EGFEM1PQ0D2K5 195 aa9.87□□□□□ -0.83
XRCC1-201ENST00000262887 DEFB105AQ8NG35 78 aa9.86□□□□□ -0.83
XRCC1-201ENST00000262887 PSPHP1O15172 72 aa9.85□□□□□ -0.83
XRCC1-201ENST00000262887 C1orf64Q8NEQ6 169 aa9.83□□□□□ -0.84
XRCC1-201ENST00000262887 STAB1Q9NY15 2570 aa9.83□□□□□ -0.84
XRCC1-201ENST00000262887 PKD1L1Q8TDX9 2849 aa9.83□□□□□ -0.84
XRCC1-201ENST00000262887 LCE6AA0A183 80 aa9.83□□□□□ -0.84
XRCC1-201ENST00000262887 SPART-AS1P0CW21 52 aa9.83□□□□□ -0.84
XRCC1-201ENST00000262887 APOC4P55056 127 aa9.83□□□□□ -0.84
XRCC1-201ENST00000262887 Q8NAQ8 132 aa9.83□□□□□ -0.84
XRCC1-201ENST00000262887 FBN1P35555 2871 aaKnown RBP9.83□□□□□ -0.84
XRCC1-201ENST00000262887 KPRPQ5T749 579 aaPredicted RBP9.83□□□□□ -0.84
XRCC1-201ENST00000262887 IGLV5-48A0A075B6I7 105 aa9.82□□□□□ -0.84
XRCC1-201ENST00000262887 Q8N377 158 aa9.82□□□□□ -0.84
XRCC1-201ENST00000262887 TRAV22A0A0B4J277 110 aa9.81□□□□□ -0.84
XRCC1-201ENST00000262887 KRTAP10-3P60369 221 aa9.81□□□□□ -0.84
XRCC1-201ENST00000262887 MRPL55Q7Z7F7 128 aaKnown RBP9.8□□□□□ -0.84
XRCC1-201ENST00000262887 A0A1B0GW54 56 aa9.79□□□□□ -0.84
XRCC1-201ENST00000262887 KRTAP1-1Q07627 177 aa9.78□□□□□ -0.84
XRCC1-201ENST00000262887 WFDC10BQ8IUB3 73 aa9.78□□□□□ -0.84
XRCC1-201ENST00000262887 C15orf56Q8N910 161 aa9.78□□□□□ -0.84
XRCC1-201ENST00000262887 NKAPP1Q8N9T2 125 aa9.78□□□□□ -0.84
XRCC1-201ENST00000262887 A0A1W2PNM2 257 aa9.77□□□□□ -0.85
XRCC1-201ENST00000262887 ZCCHC13Q8WW36 166 aaKnown RBP9.77□□□□□ -0.85
XRCC1-201ENST00000262887 KRTAP26-1Q6PEX3 210 aa9.77□□□□□ -0.85
XRCC1-201ENST00000262887 KCNQ1DNQ9H478 68 aa9.76□□□□□ -0.85
XRCC1-201ENST00000262887 ETDCA0A1B0GVM5 59 aa9.76□□□□□ -0.85
XRCC1-201ENST00000262887 SYCNQ0VAF6 134 aa9.74□□□□□ -0.85
XRCC1-201ENST00000262887 C1orf137Q5JT78 98 aa9.74□□□□□ -0.85
XRCC1-201ENST00000262887 C7orf33Q8WU49 177 aa9.73□□□□□ -0.85
XRCC1-201ENST00000262887 COL6A5A8TX70 2615 aa9.73□□□□□ -0.85
XRCC1-201ENST00000262887 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.73□□□□□ -0.85
XRCC1-201ENST00000262887 A8MU10 97 aa9.73□□□□□ -0.85
XRCC1-201ENST00000262887 A8MUN3 132 aa9.73□□□□□ -0.85
XRCC1-201ENST00000262887 SERTAD4-AS1Q5TG53 156 aa9.73□□□□□ -0.85
XRCC1-201ENST00000262887 RBM12B-AS1Q9P1G2 102 aa9.73□□□□□ -0.85
XRCC1-201ENST00000262887 DSCR10P59022 87 aa9.72□□□□□ -0.85
XRCC1-201ENST00000262887 Q8NBF4 154 aa9.72□□□□□ -0.85
XRCC1-201ENST00000262887 KTN1-AS1Q86SY8 53 aa9.72□□□□□ -0.85
XRCC1-201ENST00000262887 CYP4F30PQ9H0H9 118 aa9.72□□□□□ -0.85
XRCC1-201ENST00000262887 DHRS4-AS1Q9P1J3 65 aa9.72□□□□□ -0.85
XRCC1-201ENST00000262887 K7EQZ3 153 aa9.71□□□□□ -0.86
XRCC1-201ENST00000262887 PSCAO43653 123 aa9.71□□□□□ -0.86
XRCC1-201ENST00000262887 UBE2BP63146 152 aa9.71□□□□□ -0.86
XRCC1-201ENST00000262887 TNP2Q05952 138 aa9.7□□□□□ -0.86
XRCC1-201ENST00000262887 Q6ZRX8 168 aa9.7□□□□□ -0.86
XRCC1-201ENST00000262887 LINC00588Q9Y4M8 146 aa9.7□□□□□ -0.86
XRCC1-201ENST00000262887 SPRR4Q96PI1 79 aa9.69□□□□□ -0.86
XRCC1-201ENST00000262887 NOTCH1P46531 2555 aa9.69□□□□□ -0.86
XRCC1-201ENST00000262887 IGKV2D-24A0A075B6R9 120 aa9.69□□□□□ -0.86
XRCC1-201ENST00000262887 PRR4Q16378 134 aa9.69□□□□□ -0.86
XRCC1-201ENST00000262887 Q9BRP9 147 aa9.69□□□□□ -0.86
XRCC1-201ENST00000262887 RPL37AP8A6NKH3 93 aa9.68□□□□□ -0.86
XRCC1-201ENST00000262887 INAFM1C9JVW0 142 aa9.68□□□□□ -0.86
XRCC1-201ENST00000262887 ST20-AS1Q8NBB2 130 aa9.68□□□□□ -0.86
XRCC1-201ENST00000262887 Q5VV11 94 aa9.67□□□□□ -0.86
XRCC1-201ENST00000262887 HCG22E2RYF7 251 aa9.66□□□□□ -0.86
XRCC1-201ENST00000262887 ANK2Q01484 3957 aa9.64□□□□□ -0.87
XRCC1-201ENST00000262887 KRTAP4-16G5E9R7 235 aaPredicted RBP9.64□□□□□ -0.87
XRCC1-201ENST00000262887 NDUFB1O75438 58 aa9.64□□□□□ -0.87
XRCC1-201ENST00000262887 UBE2AP49459 152 aa9.64□□□□□ -0.87
XRCC1-201ENST00000262887 C16orf90A8MZG2 172 aa9.62□□□□□ -0.87
XRCC1-201ENST00000262887 H3BNG1 76 aa9.62□□□□□ -0.87
XRCC1-201ENST00000262887 IGLV1-50A0A075B6I6 118 aa9.62□□□□□ -0.87
XRCC1-201ENST00000262887 FAM168BA1KXE4 195 aa9.61□□□□□ -0.87
XRCC1-201ENST00000262887 PRB2P02812 416 aaPredicted RBP9.61□□□□□ -0.87
XRCC1-201ENST00000262887 NBEAL1Q6ZS30 2694 aa9.61□□□□□ -0.87
XRCC1-201ENST00000262887 CHKB-CPT1BH3BT56 60 aa9.6□□□□□ -0.87
XRCC1-201ENST00000262887 SPRR1AP35321 89 aa9.6□□□□□ -0.87
XRCC1-201ENST00000262887 PLA2G2DQ9UNK4 145 aa9.6□□□□□ -0.87
XRCC1-201ENST00000262887 NDUFS5O43920 106 aa9.59□□□□□ -0.87
XRCC1-201ENST00000262887 MP68P56378 58 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms