RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 CASC10Q5T4H9 136 aa10.9□□□□□ -0.66
PDE4C-201ENST00000262805 C7orf33Q8WU49 177 aa10.9□□□□□ -0.67
PDE4C-201ENST00000262805 CXCL6P80162 114 aa10.89□□□□□ -0.67
PDE4C-201ENST00000262805 DPH3Q96FX2 82 aa10.89□□□□□ -0.67
PDE4C-201ENST00000262805 FAM168BA1KXE4 195 aa10.87□□□□□ -0.67
PDE4C-201ENST00000262805 DNAH3Q8TD57 4116 aa10.87□□□□□ -0.67
PDE4C-201ENST00000262805 OXTP01178 125 aa10.87□□□□□ -0.67
PDE4C-201ENST00000262805 NKAPP1Q8N9T2 125 aa10.87□□□□□ -0.67
PDE4C-201ENST00000262805 DEFB105AQ8NG35 78 aa10.87□□□□□ -0.67
PDE4C-201ENST00000262805 DNAH10OSP0CZ25 163 aa10.86□□□□□ -0.67
PDE4C-201ENST00000262805 KCNQ1DNQ9H478 68 aa10.86□□□□□ -0.67
PDE4C-201ENST00000262805 RPL37AP8A6NKH3 93 aa10.85□□□□□ -0.67
PDE4C-201ENST00000262805 PRB2P02812 416 aaPredicted RBP10.85□□□□□ -0.67
PDE4C-201ENST00000262805 FAM19A5Q7Z5A7 132 aaPredicted RBP10.85□□□□□ -0.67
PDE4C-201ENST00000262805 Q8N9L7 120 aa10.84□□□□□ -0.67
PDE4C-201ENST00000262805 LINC00588Q9Y4M8 146 aa10.84□□□□□ -0.67
PDE4C-201ENST00000262805 TRAV7A0A075B6U4 112 aa10.83□□□□□ -0.68
PDE4C-201ENST00000262805 RPS28P62857 69 aaKnown RBP10.83□□□□□ -0.68
PDE4C-201ENST00000262805 Q8N377 158 aa10.83□□□□□ -0.68
PDE4C-201ENST00000262805 MDFIQ99750 246 aa10.83□□□□□ -0.68
PDE4C-201ENST00000262805 DNAH1Q9P2D7 4330 aa10.82□□□□□ -0.68
PDE4C-201ENST00000262805 KRTAP7-1Q8IUC3 87 aa10.82□□□□□ -0.68
PDE4C-201ENST00000262805 F8WDY8 70 aa10.81□□□□□ -0.68
PDE4C-201ENST00000262805 C3orf84H3BNL1 204 aa10.81□□□□□ -0.68
PDE4C-201ENST00000262805 TM2D3Q9BRN9 247 aa10.8□□□□□ -0.68
PDE4C-201ENST00000262805 Q9BRP9 147 aa10.8□□□□□ -0.68
PDE4C-201ENST00000262805 NBEAL1Q6ZS30 2694 aa10.8□□□□□ -0.68
PDE4C-201ENST00000262805 SNURFQ9Y675 71 aa10.8□□□□□ -0.68
PDE4C-201ENST00000262805 BCE1O60756 84 aa10.79□□□□□ -0.68
PDE4C-201ENST00000262805 KRTAP4-16G5E9R7 235 aaPredicted RBP10.78□□□□□ -0.68
PDE4C-201ENST00000262805 TLX1NBP0CAT3 122 aa10.78□□□□□ -0.68
PDE4C-201ENST00000262805 H7BZZ5 65 aa10.78□□□□□ -0.68
PDE4C-201ENST00000262805 KRTAP21-3Q3LHN1 58 aa10.78□□□□□ -0.68
PDE4C-201ENST00000262805 Q6ZRX8 168 aa10.77□□□□□ -0.69
PDE4C-201ENST00000262805 ST20-AS1Q8NBB2 130 aa10.77□□□□□ -0.69
PDE4C-201ENST00000262805 MRAPQ8TCY5 172 aa10.77□□□□□ -0.69
PDE4C-201ENST00000262805 BPY2O14599 106 aa10.77□□□□□ -0.69
PDE4C-201ENST00000262805 RMI2Q96E14 147 aa10.77□□□□□ -0.69
PDE4C-201ENST00000262805 IGLV1-50A0A075B6I6 118 aa10.76□□□□□ -0.69
PDE4C-201ENST00000262805 HUWE1Q7Z6Z7 4374 aaKnown RBP10.75□□□□□ -0.69
PDE4C-201ENST00000262805 IGKV4-1P06312 121 aa10.75□□□□□ -0.69
PDE4C-201ENST00000262805 NREPQ16612 68 aa10.75□□□□□ -0.69
PDE4C-201ENST00000262805 PLA2G2DQ9UNK4 145 aa10.75□□□□□ -0.69
PDE4C-201ENST00000262805 IGLV5-48A0A075B6I7 105 aa10.74□□□□□ -0.69
PDE4C-201ENST00000262805 LYSTQ99698 3801 aa10.74□□□□□ -0.69
PDE4C-201ENST00000262805 KLKP1Q107X0 134 aa10.74□□□□□ -0.69
PDE4C-201ENST00000262805 ERC2-IT1O76042 136 aa10.73□□□□□ -0.69
PDE4C-201ENST00000262805 SPRR1AP35321 89 aa10.73□□□□□ -0.69
PDE4C-201ENST00000262805 IGLV5-37A0A075B6J1 123 aa10.72□□□□□ -0.69
PDE4C-201ENST00000262805 FAM236DA0A1B0GTK5 79 aa10.72□□□□□ -0.69
PDE4C-201ENST00000262805 ETDCA0A1B0GVM5 59 aa10.72□□□□□ -0.69
PDE4C-201ENST00000262805 FAM236CP0DP71 79 aa10.72□□□□□ -0.69
PDE4C-201ENST00000262805 DHRS4-AS1Q9P1J3 65 aa10.72□□□□□ -0.69
PDE4C-201ENST00000262805 A0A1W2PNM2 257 aa10.71□□□□□ -0.69
PDE4C-201ENST00000262805 PRYO14603 147 aa10.71□□□□□ -0.69
PDE4C-201ENST00000262805 DNAH10Q8IVF4 4471 aa10.7□□□□□ -0.7
PDE4C-201ENST00000262805 TNP2Q05952 138 aa10.69□□□□□ -0.7
PDE4C-201ENST00000262805 MRPL55Q7Z7F7 128 aaKnown RBP10.69□□□□□ -0.7
PDE4C-201ENST00000262805 F8WEM9 126 aa10.68□□□□□ -0.7
PDE4C-201ENST00000262805 C1orf137Q5JT78 98 aa10.67□□□□□ -0.7
PDE4C-201ENST00000262805 K7EIL1 84 aa10.65□□□□□ -0.7
PDE4C-201ENST00000262805 UBE2BP63146 152 aa10.65□□□□□ -0.7
PDE4C-201ENST00000262805 Q5XG85 94 aa10.65□□□□□ -0.7
PDE4C-201ENST00000262805 FUSP35637 526 aaKnown RBP eCLIP10.64□□□□□ -0.71
PDE4C-201ENST00000262805 KRTAP1-5Q9BYS1 174 aa10.64□□□□□ -0.71
PDE4C-201ENST00000262805 A0A0G2JQZ4 141 aa10.64□□□□□ -0.71
PDE4C-201ENST00000262805 A0A1W2PNN7 141 aa10.64□□□□□ -0.71
PDE4C-201ENST00000262805 C4orf26Q17RF5 130 aa10.63□□□□□ -0.71
PDE4C-201ENST00000262805 OCR1Q9BZK8 76 aa10.63□□□□□ -0.71
PDE4C-201ENST00000262805 STAB2Q8WWQ8 2551 aa10.62□□□□□ -0.71
PDE4C-201ENST00000262805 TMEM254Q8TBM7 123 aa10.62□□□□□ -0.71
PDE4C-201ENST00000262805 MGAM2Q2M2H8 2515 aa10.62□□□□□ -0.71
PDE4C-201ENST00000262805 Q8NBF4 154 aa10.62□□□□□ -0.71
PDE4C-201ENST00000262805 REG3GQ6UW15 175 aa10.61□□□□□ -0.71
PDE4C-201ENST00000262805 DNAH9Q9NYC9 4486 aa10.61□□□□□ -0.71
PDE4C-201ENST00000262805 COL7A1Q02388 2944 aa10.6□□□□□ -0.71
PDE4C-201ENST00000262805 SMIM29Q86T20 159 aa10.6□□□□□ -0.71
PDE4C-201ENST00000262805 A0A096LNI7 61 aa10.6□□□□□ -0.71
PDE4C-201ENST00000262805 IGKV2-24A0A0C4DH68 120 aa10.6□□□□□ -0.71
PDE4C-201ENST00000262805 EPM2AB3EWF7 344 aa10.59□□□□□ -0.71
PDE4C-201ENST00000262805 SERP1Q9Y6X1 66 aa10.58□□□□□ -0.72
PDE4C-201ENST00000262805 CSMD3Q7Z407 3707 aa10.58□□□□□ -0.72
PDE4C-201ENST00000262805 PRLHP81277 87 aa10.58□□□□□ -0.72
PDE4C-201ENST00000262805 SPRR4Q96PI1 79 aa10.58□□□□□ -0.72
PDE4C-201ENST00000262805 DSCR10P59022 87 aa10.56□□□□□ -0.72
PDE4C-201ENST00000262805 LINC00476Q8WZB0 136 aa10.56□□□□□ -0.72
PDE4C-201ENST00000262805 HRCT1Q6UXD1 115 aa10.55□□□□□ -0.72
PDE4C-201ENST00000262805 FAM30AQ9NZY2 134 aa10.55□□□□□ -0.72
PDE4C-201ENST00000262805 DNHD1Q96M86 4753 aa10.55□□□□□ -0.72
PDE4C-201ENST00000262805 A0A0U1RQV1 116 aa10.55□□□□□ -0.72
PDE4C-201ENST00000262805 SRRM2Q9UQ35 2752 aaKnown RBP10.54□□□□□ -0.72
PDE4C-201ENST00000262805 A0A1B0GW54 56 aa10.53□□□□□ -0.72
PDE4C-201ENST00000262805 K7EQZ3 153 aa10.53□□□□□ -0.72
PDE4C-201ENST00000262805 HIGD2AQ9BW72 106 aa10.53□□□□□ -0.72
PDE4C-201ENST00000262805 NDUFC1O43677 76 aa10.53□□□□□ -0.72
PDE4C-201ENST00000262805 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.52□□□□□ -0.72
PDE4C-201ENST00000262805 C5orf47Q569G3 176 aa10.52□□□□□ -0.72
PDE4C-201ENST00000262805 KRTAP11-1Q8IUC1 163 aa10.52□□□□□ -0.72
PDE4C-201ENST00000262805 TENM2Q9NT68 2774 aa10.52□□□□□ -0.73
PDE4C-201ENST00000262805 C16orf90A8MZG2 172 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms