RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 SPINK6Q6UWN8 80 aa10.14□□□□□ -0.79
CHCHD3-201ENST00000262570 A6NDN8 102 aa10.13□□□□□ -0.79
CHCHD3-201ENST00000262570 HSD52Q0P140 79 aa10.13□□□□□ -0.79
CHCHD3-201ENST00000262570 KRTAP13-1Q8IUC0 172 aa10.13□□□□□ -0.79
CHCHD3-201ENST00000262570 CBY1Q9Y3M2 126 aa10.13□□□□□ -0.79
CHCHD3-201ENST00000262570 FAM19A1Q7Z5A9 133 aa10.12□□□□□ -0.79
CHCHD3-201ENST00000262570 TSTD3H0UI37 97 aa10.11□□□□□ -0.79
CHCHD3-201ENST00000262570 UBE2AP49459 152 aa10.11□□□□□ -0.79
CHCHD3-201ENST00000262570 MYCBP2O75592 4640 aa10.11□□□□□ -0.79
CHCHD3-201ENST00000262570 ZNF73O43830 326 aaPredicted RBP10.1□□□□□ -0.79
CHCHD3-201ENST00000262570 RPL28P46779 137 aaKnown RBP10.1□□□□□ -0.79
CHCHD3-201ENST00000262570 CFC1BP0CG36 223 aa10.09□□□□□ -0.79
CHCHD3-201ENST00000262570 CFC1P0CG37 223 aa10.09□□□□□ -0.79
CHCHD3-201ENST00000262570 FXYD2P54710 66 aa10.09□□□□□ -0.79
CHCHD3-201ENST00000262570 PRLHP81277 87 aa10.09□□□□□ -0.79
CHCHD3-201ENST00000262570 FLG2Q5D862 2391 aaPredicted RBP10.09□□□□□ -0.79
CHCHD3-201ENST00000262570 ETDCA0A1B0GVM5 59 aa10.09□□□□□ -0.79
CHCHD3-201ENST00000262570 H0Y9J4 135 aa10.09□□□□□ -0.79
CHCHD3-201ENST00000262570 TMEM238LA0A1B0GVL6 79 aa10.08□□□□□ -0.8
CHCHD3-201ENST00000262570 A6NJY4 79 aa10.08□□□□□ -0.8
CHCHD3-201ENST00000262570 DIRC1Q969H9 104 aa10.08□□□□□ -0.8
CHCHD3-201ENST00000262570 B5MCH6 92 aa10.07□□□□□ -0.8
CHCHD3-201ENST00000262570 LRP1Q07954 4544 aaKnown RBP10.07□□□□□ -0.8
CHCHD3-201ENST00000262570 A0A0B4J2C4 111 aa10.06□□□□□ -0.8
CHCHD3-201ENST00000262570 C6orf99Q4VX62 202 aa10.05□□□□□ -0.8
CHCHD3-201ENST00000262570 FAT3Q8TDW7 4589 aa10.05□□□□□ -0.8
CHCHD3-201ENST00000262570 HINT1P49773 126 aaPredicted RBP10.05□□□□□ -0.8
CHCHD3-201ENST00000262570 CTAG1AP78358 180 aa10.05□□□□□ -0.8
CHCHD3-201ENST00000262570 Q6ZRX8 168 aa10.05□□□□□ -0.8
CHCHD3-201ENST00000262570 SMIM11BQ8TCY0 68 aa10.05□□□□□ -0.8
CHCHD3-201ENST00000262570 RPL13AP40429 203 aaKnown RBP10.04□□□□□ -0.8
CHCHD3-201ENST00000262570 RAB37Q96AX2 223 aa10.04□□□□□ -0.8
CHCHD3-201ENST00000262570 HIGD2AQ9BW72 106 aa10.03□□□□□ -0.8
CHCHD3-201ENST00000262570 TRBV7-6A0A0J9YX20 115 aa10.01□□□□□ -0.81
CHCHD3-201ENST00000262570 BVES-AS1Q5T3Y7 98 aa10.01□□□□□ -0.81
CHCHD3-201ENST00000262570 SMCR5Q8TEV8 140 aa10.01□□□□□ -0.81
CHCHD3-201ENST00000262570 Q9BRP9 147 aa10.01□□□□□ -0.81
CHCHD3-201ENST00000262570 ELOF1P60002 83 aaKnown RBP10.01□□□□□ -0.81
CHCHD3-201ENST00000262570 NHP2Q9NX24 153 aaKnown RBP10.01□□□□□ -0.81
CHCHD3-201ENST00000262570 PRO1854Q9UHT4 67 aa10.01□□□□□ -0.81
CHCHD3-201ENST00000262570 A0A1B0GWB2 263 aa10□□□□□ -0.81
CHCHD3-201ENST00000262570 COX7BP24311 80 aa10□□□□□ -0.81
CHCHD3-201ENST00000262570 H7C2G1 150 aa9.98□□□□□ -0.81
CHCHD3-201ENST00000262570 KRTAP1-4P0C5Y4 121 aa9.98□□□□□ -0.81
CHCHD3-201ENST00000262570 M0R143 59 aa9.97□□□□□ -0.81
CHCHD3-201ENST00000262570 ERC2-IT1O76042 136 aa9.97□□□□□ -0.81
CHCHD3-201ENST00000262570 OXTP01178 125 aa9.97□□□□□ -0.81
CHCHD3-201ENST00000262570 K7ERJ3 54 aa9.96□□□□□ -0.82
CHCHD3-201ENST00000262570 LINC01600Q96MT4 127 aa9.96□□□□□ -0.82
CHCHD3-201ENST00000262570 DHRS4-AS1Q9P1J3 65 aa9.96□□□□□ -0.82
CHCHD3-201ENST00000262570 KRTAP29-1A8MX34 341 aaPredicted RBP9.95□□□□□ -0.82
CHCHD3-201ENST00000262570 VAMP3Q15836 100 aa9.95□□□□□ -0.82
CHCHD3-201ENST00000262570 Q1RN00 199 aa9.93□□□□□ -0.82
CHCHD3-201ENST00000262570 SPRR4Q96PI1 79 aa9.92□□□□□ -0.82
CHCHD3-201ENST00000262570 ZNF706Q9Y5V0 76 aaPredicted RBP9.92□□□□□ -0.82
CHCHD3-201ENST00000262570 ANAPC11Q9NYG5 84 aa9.91□□□□□ -0.82
CHCHD3-201ENST00000262570 LINC00575Q6W349 94 aa9.9□□□□□ -0.82
CHCHD3-201ENST00000262570 TNXBP22105 4242 aa9.89□□□□□ -0.83
CHCHD3-201ENST00000262570 TSPAN13O95857 204 aa9.88□□□□□ -0.83
CHCHD3-201ENST00000262570 ST20-AS1Q8NBB2 130 aa9.88□□□□□ -0.83
CHCHD3-201ENST00000262570 H0YGX0 51 aa9.88□□□□□ -0.83
CHCHD3-201ENST00000262570 TRIAP1O43715 76 aa9.88□□□□□ -0.83
CHCHD3-201ENST00000262570 MT1HL1P0DM35 61 aa9.88□□□□□ -0.83
CHCHD3-201ENST00000262570 FAM229BQ4G0N7 80 aa9.88□□□□□ -0.83
CHCHD3-201ENST00000262570 PRR26Q8N8Z3 221 aa9.88□□□□□ -0.83
CHCHD3-201ENST00000262570 A0A087X002 238 aa9.87□□□□□ -0.83
CHCHD3-201ENST00000262570 SLC25A20O43772 301 aa9.87□□□□□ -0.83
CHCHD3-201ENST00000262570 KRTAP10-8P60410 259 aa9.87□□□□□ -0.83
CHCHD3-201ENST00000262570 LINC00483Q53H64 154 aa9.87□□□□□ -0.83
CHCHD3-201ENST00000262570 GAGE2AQ6NT46 116 aa9.87□□□□□ -0.83
CHCHD3-201ENST00000262570 CRYGAP11844 174 aa9.86□□□□□ -0.83
CHCHD3-201ENST00000262570 hADV29S1A0JD25 119 aa9.85□□□□□ -0.83
CHCHD3-201ENST00000262570 BATFQ16520 125 aa9.85□□□□□ -0.83
CHCHD3-201ENST00000262570 J3QL48 77 aa9.84□□□□□ -0.83
CHCHD3-201ENST00000262570 PSMB2P49721 201 aa9.84□□□□□ -0.83
CHCHD3-201ENST00000262570 FAM218AQ96MZ4 157 aa9.83□□□□□ -0.84
CHCHD3-201ENST00000262570 DMBT1Q9UGM3 2413 aaPredicted RBP9.82□□□□□ -0.84
CHCHD3-201ENST00000262570 COX6CP09669 75 aa9.82□□□□□ -0.84
CHCHD3-201ENST00000262570 SPRR1BP22528 89 aa9.82□□□□□ -0.84
CHCHD3-201ENST00000262570 KRTAP13-2Q52LG2 175 aa9.82□□□□□ -0.84
CHCHD3-201ENST00000262570 IGLV5-48A0A075B6I7 105 aa9.81□□□□□ -0.84
CHCHD3-201ENST00000262570 LINC01547P58512 204 aaPredicted RBP9.81□□□□□ -0.84
CHCHD3-201ENST00000262570 Q6ZQY7 126 aa9.8□□□□□ -0.84
CHCHD3-201ENST00000262570 DEFB105AQ8NG35 78 aa9.8□□□□□ -0.84
CHCHD3-201ENST00000262570 SNHG12Q9BXW3 62 aa9.8□□□□□ -0.84
CHCHD3-201ENST00000262570 TEX49A0A1B0GTD5 131 aa9.79□□□□□ -0.84
CHCHD3-201ENST00000262570 A0A1B0GX51 115 aa9.79□□□□□ -0.84
CHCHD3-201ENST00000262570 SNCGO76070 127 aa9.79□□□□□ -0.84
CHCHD3-201ENST00000262570 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.79□□□□□ -0.84
CHCHD3-201ENST00000262570 CLEC2BQ92478 149 aa9.79□□□□□ -0.84
CHCHD3-201ENST00000262570 HERC1Q15751 4861 aa9.78□□□□□ -0.84
CHCHD3-201ENST00000262570 C3orf22Q8N5N4 141 aa9.78□□□□□ -0.84
CHCHD3-201ENST00000262570 TYMSOSQ8TAI1 123 aa9.78□□□□□ -0.84
CHCHD3-201ENST00000262570 SCGB1C2P0DMR2 95 aa9.77□□□□□ -0.85
CHCHD3-201ENST00000262570 Q8N377 158 aa9.76□□□□□ -0.85
CHCHD3-201ENST00000262570 NAA38Q9BRA0 125 aaKnown RBP9.76□□□□□ -0.85
CHCHD3-201ENST00000262570 A0A1B0GV90 55 aa9.75□□□□□ -0.85
CHCHD3-201ENST00000262570 IGLV9-49A0A0B4J1Y8 123 aa9.74□□□□□ -0.85
CHCHD3-201ENST00000262570 SMIM29Q86T20 159 aa9.74□□□□□ -0.85
CHCHD3-201ENST00000262570 LAMTOR3Q9UHA4 124 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms