RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 INAFM1C9JVW0 142 aa11.85□□□□□ -0.51
TRAF4-201ENST00000262395 KPRPQ5T749 579 aaPredicted RBP11.85□□□□□ -0.51
TRAF4-201ENST00000262395 Q6ZRP5 223 aa11.85□□□□□ -0.51
TRAF4-201ENST00000262395 C15orf56Q8N910 161 aa11.85□□□□□ -0.51
TRAF4-201ENST00000262395 NSD1Q96L73 2696 aaPredicted RBP11.85□□□□□ -0.51
TRAF4-201ENST00000262395 LINC00528Q8N1L1 170 aa11.84□□□□□ -0.51
TRAF4-201ENST00000262395 MPLKIPQ8TAP9 179 aa11.84□□□□□ -0.51
TRAF4-201ENST00000262395 NREPQ16612 68 aa11.83□□□□□ -0.52
TRAF4-201ENST00000262395 EGFEM1PQ0D2K5 195 aa11.83□□□□□ -0.52
TRAF4-201ENST00000262395 TENM3Q9P273 2699 aa11.82□□□□□ -0.52
TRAF4-201ENST00000262395 KRTAP26-1Q6PEX3 210 aa11.82□□□□□ -0.52
TRAF4-201ENST00000262395 BCE1O60756 84 aa11.82□□□□□ -0.52
TRAF4-201ENST00000262395 IGKV2D-24A0A075B6R9 120 aa11.81□□□□□ -0.52
TRAF4-201ENST00000262395 H3BQ85 93 aa11.81□□□□□ -0.52
TRAF4-201ENST00000262395 Q6ZTC4 211 aa11.81□□□□□ -0.52
TRAF4-201ENST00000262395 ESRGQ1W209 222 aa11.78□□□□□ -0.52
TRAF4-201ENST00000262395 SERTAD4-AS1Q5TG53 156 aa11.78□□□□□ -0.52
TRAF4-201ENST00000262395 F8P00451 2351 aa11.77□□□□□ -0.52
TRAF4-201ENST00000262395 RPL37AP8A6NKH3 93 aa11.77□□□□□ -0.53
TRAF4-201ENST00000262395 IGKV4-1P06312 121 aa11.77□□□□□ -0.53
TRAF4-201ENST00000262395 TMEM254Q8TBM7 123 aa11.76□□□□□ -0.53
TRAF4-201ENST00000262395 FAM229BQ4G0N7 80 aa11.76□□□□□ -0.53
TRAF4-201ENST00000262395 NKAPP1Q8N9T2 125 aa11.75□□□□□ -0.53
TRAF4-201ENST00000262395 OXLD1Q5BKU9 147 aa11.75□□□□□ -0.53
TRAF4-201ENST00000262395 Q8N377 158 aa11.73□□□□□ -0.53
TRAF4-201ENST00000262395 NDUFC1O43677 76 aa11.73□□□□□ -0.53
TRAF4-201ENST00000262395 SYCNQ0VAF6 134 aa11.73□□□□□ -0.53
TRAF4-201ENST00000262395 C7orf33Q8WU49 177 aa11.73□□□□□ -0.53
TRAF4-201ENST00000262395 BAHCC1Q9P281 2608 aa11.73□□□□□ -0.53
TRAF4-201ENST00000262395 FAM168BA1KXE4 195 aa11.72□□□□□ -0.53
TRAF4-201ENST00000262395 C1orf195Q5TG92 126 aa11.7□□□□□ -0.54
TRAF4-201ENST00000262395 ST20-AS1Q8NBB2 130 aa11.7□□□□□ -0.54
TRAF4-201ENST00000262395 FLNBO75369 2602 aaKnown RBP11.69□□□□□ -0.54
TRAF4-201ENST00000262395 HIGD2AQ9BW72 106 aa11.69□□□□□ -0.54
TRAF4-201ENST00000262395 FAM30AQ9NZY2 134 aa11.68□□□□□ -0.54
TRAF4-201ENST00000262395 J3QKU1 62 aa11.68□□□□□ -0.54
TRAF4-201ENST00000262395 OCR1Q9BZK8 76 aa11.67□□□□□ -0.54
TRAF4-201ENST00000262395 KCNQ1DNQ9H478 68 aa11.66□□□□□ -0.54
TRAF4-201ENST00000262395 ANK2Q01484 3957 aa11.66□□□□□ -0.54
TRAF4-201ENST00000262395 ATP5EP56381 51 aaPredicted RBP11.66□□□□□ -0.54
TRAF4-201ENST00000262395 CASC10Q5T4H9 136 aa11.65□□□□□ -0.54
TRAF4-201ENST00000262395 SMIM29Q86T20 159 aa11.65□□□□□ -0.54
TRAF4-201ENST00000262395 Q9BRP9 147 aa11.65□□□□□ -0.54
TRAF4-201ENST00000262395 KRTAP10-11P60412 298 aa11.64□□□□□ -0.55
TRAF4-201ENST00000262395 V9GYY9 64 aa11.64□□□□□ -0.55
TRAF4-201ENST00000262395 A0A1W2PNM2 257 aa11.64□□□□□ -0.55
TRAF4-201ENST00000262395 LRCOL1A6NCL2 159 aa11.64□□□□□ -0.55
TRAF4-201ENST00000262395 F8WDY8 70 aa11.64□□□□□ -0.55
TRAF4-201ENST00000262395 PRYO14603 147 aa11.64□□□□□ -0.55
TRAF4-201ENST00000262395 A0A0G2JQZ4 141 aa11.63□□□□□ -0.55
TRAF4-201ENST00000262395 A0A1W2PNN7 141 aa11.63□□□□□ -0.55
TRAF4-201ENST00000262395 FUSP35637 526 aaKnown RBP eCLIP11.63□□□□□ -0.55
TRAF4-201ENST00000262395 MAST4O15021 2626 aa11.63□□□□□ -0.55
TRAF4-201ENST00000262395 DEFB131BA0A096LNP1 70 aa11.63□□□□□ -0.55
TRAF4-201ENST00000262395 NOTCH1P46531 2555 aa11.62□□□□□ -0.55
TRAF4-201ENST00000262395 C1orf137Q5JT78 98 aa11.61□□□□□ -0.55
TRAF4-201ENST00000262395 ETDCA0A1B0GVM5 59 aa11.6□□□□□ -0.55
TRAF4-201ENST00000262395 ERC2-IT1O76042 136 aa11.6□□□□□ -0.55
TRAF4-201ENST00000262395 STAB1Q9NY15 2570 aa11.6□□□□□ -0.55
TRAF4-201ENST00000262395 IGLV5-48A0A075B6I7 105 aa11.6□□□□□ -0.55
TRAF4-201ENST00000262395 LINC01556Q5JQF7 62 aa11.6□□□□□ -0.55
TRAF4-201ENST00000262395 Q6ZRX8 168 aa11.6□□□□□ -0.55
TRAF4-201ENST00000262395 H3BNG1 76 aa11.59□□□□□ -0.55
TRAF4-201ENST00000262395 FBN1P35555 2871 aaKnown RBP11.59□□□□□ -0.55
TRAF4-201ENST00000262395 SEC61GP60059 68 aa11.58□□□□□ -0.56
TRAF4-201ENST00000262395 KRTAP7-1Q8IUC3 87 aa11.56□□□□□ -0.56
TRAF4-201ENST00000262395 UBE2BP63146 152 aa11.56□□□□□ -0.56
TRAF4-201ENST00000262395 C11orf45Q8TAV5 145 aa11.56□□□□□ -0.56
TRAF4-201ENST00000262395 IGLV1-50A0A075B6I6 118 aa11.55□□□□□ -0.56
TRAF4-201ENST00000262395 DEFB116Q30KQ4 102 aa11.55□□□□□ -0.56
TRAF4-201ENST00000262395 DHRS4-AS1Q9P1J3 65 aa11.55□□□□□ -0.56
TRAF4-201ENST00000262395 KRTAP4-16G5E9R7 235 aaPredicted RBP11.53□□□□□ -0.56
TRAF4-201ENST00000262395 K7EQZ3 153 aa11.53□□□□□ -0.56
TRAF4-201ENST00000262395 Q8NBF4 154 aa11.52□□□□□ -0.57
TRAF4-201ENST00000262395 DSCR10P59022 87 aa11.51□□□□□ -0.57
TRAF4-201ENST00000262395 TNP2Q05952 138 aa11.51□□□□□ -0.57
TRAF4-201ENST00000262395 PRR4Q16378 134 aa11.49□□□□□ -0.57
TRAF4-201ENST00000262395 PRB2P02812 416 aaPredicted RBP11.49□□□□□ -0.57
TRAF4-201ENST00000262395 SRRM2Q9UQ35 2752 aaKnown RBP11.49□□□□□ -0.57
TRAF4-201ENST00000262395 MRPL55Q7Z7F7 128 aaKnown RBP11.48□□□□□ -0.57
TRAF4-201ENST00000262395 DNAH10OSP0CZ25 163 aa11.48□□□□□ -0.57
TRAF4-201ENST00000262395 LINC00588Q9Y4M8 146 aa11.48□□□□□ -0.57
TRAF4-201ENST00000262395 COL6A5A8TX70 2615 aa11.48□□□□□ -0.57
TRAF4-201ENST00000262395 SPRR1AP35321 89 aa11.46□□□□□ -0.57
TRAF4-201ENST00000262395 PSPHP1O15172 72 aa11.46□□□□□ -0.58
TRAF4-201ENST00000262395 TLX1NBP0CAT3 122 aa11.45□□□□□ -0.58
TRAF4-201ENST00000262395 LINC00476Q8WZB0 136 aa11.45□□□□□ -0.58
TRAF4-201ENST00000262395 PRLHP81277 87 aa11.43□□□□□ -0.58
TRAF4-201ENST00000262395 IGKV2-24A0A0C4DH68 120 aa11.43□□□□□ -0.58
TRAF4-201ENST00000262395 PLA2G2DQ9UNK4 145 aa11.43□□□□□ -0.58
TRAF4-201ENST00000262395 NBEAL1Q6ZS30 2694 aa11.43□□□□□ -0.58
TRAF4-201ENST00000262395 SPRR4Q96PI1 79 aa11.42□□□□□ -0.58
TRAF4-201ENST00000262395 WFDC13Q8IUB5 93 aa11.42□□□□□ -0.58
TRAF4-201ENST00000262395 hDV103S1A0JD37 113 aa11.42□□□□□ -0.58
TRAF4-201ENST00000262395 C1orf64Q8NEQ6 169 aa11.42□□□□□ -0.58
TRAF4-201ENST00000262395 REG3GQ6UW15 175 aa11.41□□□□□ -0.58
TRAF4-201ENST00000262395 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.4□□□□□ -0.58
TRAF4-201ENST00000262395 PSCAO43653 123 aa11.4□□□□□ -0.58
TRAF4-201ENST00000262395 CSMD3Q7Z407 3707 aa11.4□□□□□ -0.58
TRAF4-201ENST00000262395 IGLV5-37A0A075B6J1 123 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms