RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 MKI67P46013 3256 aaKnown RBP9.16□□□□□ -0.94
CDH1-201ENST00000261769 A0A087WVE0 104 aa9.16□□□□□ -0.94
CDH1-201ENST00000261769 H0Y9P7 68 aa9.16□□□□□ -0.94
CDH1-201ENST00000261769 CNBPP62633 177 aaKnown RBP9.16□□□□□ -0.94
CDH1-201ENST00000261769 SPAG11AQ6PDA7 123 aa9.16□□□□□ -0.94
CDH1-201ENST00000261769 AKAP13Q12802 2813 aa9.15□□□□□ -0.94
CDH1-201ENST00000261769 TP53AIP1Q9HCN2 124 aa9.15□□□□□ -0.95
CDH1-201ENST00000261769 SSBP3-AS1Q7Z2R9 100 aa9.14□□□□□ -0.95
CDH1-201ENST00000261769 CASC10Q5T4H9 136 aa9.14□□□□□ -0.95
CDH1-201ENST00000261769 FAM218AQ96MZ4 157 aa9.14□□□□□ -0.95
CDH1-201ENST00000261769 IGKV2D-30A0A075B6S6 120 aa9.14□□□□□ -0.95
CDH1-201ENST00000261769 IGKV2-30P06310 120 aa9.14□□□□□ -0.95
CDH1-201ENST00000261769 LITAFQ99732 161 aa9.14□□□□□ -0.95
CDH1-201ENST00000261769 PLA2G2DQ9UNK4 145 aa9.14□□□□□ -0.95
CDH1-201ENST00000261769 SMR3BP02814 79 aaPredicted RBP9.13□□□□□ -0.95
CDH1-201ENST00000261769 MPLKIPQ8TAP9 179 aa9.13□□□□□ -0.95
CDH1-201ENST00000261769 LINC00313P59037 77 aa9.12□□□□□ -0.95
CDH1-201ENST00000261769 hDV103S1A0JD37 113 aa9.12□□□□□ -0.95
CDH1-201ENST00000261769 PCOTHQ58A44 107 aa9.12□□□□□ -0.95
CDH1-201ENST00000261769 GCN1Q92616 2671 aaKnown RBP9.11□□□□□ -0.95
CDH1-201ENST00000261769 LOC110117498A0A087WWA1 95 aa9.1□□□□□ -0.95
CDH1-201ENST00000261769 TRBV7-4A0A0J9YYF1 115 aa9.1□□□□□ -0.95
CDH1-201ENST00000261769 LINC00304Q8N9R0 145 aa9.1□□□□□ -0.95
CDH1-201ENST00000261769 LINC00528Q8N1L1 170 aa9.09□□□□□ -0.95
CDH1-201ENST00000261769 C9orf129Q5T035 196 aaKnown RBP9.09□□□□□ -0.95
CDH1-201ENST00000261769 ATP11AUNQ6ZP68 121 aa9.08□□□□□ -0.96
CDH1-201ENST00000261769 Q6ZQT0 140 aa9.08□□□□□ -0.96
CDH1-201ENST00000261769 NOTCH1P46531 2555 aa9.08□□□□□ -0.96
CDH1-201ENST00000261769 IGLV7-43P04211 117 aa9.07□□□□□ -0.96
CDH1-201ENST00000261769 C1orf195Q5TG92 126 aa9.07□□□□□ -0.96
CDH1-201ENST00000261769 C8orf87E5RJ46 101 aa9.06□□□□□ -0.96
CDH1-201ENST00000261769 TNP2Q05952 138 aa9.06□□□□□ -0.96
CDH1-201ENST00000261769 C1orf64Q8NEQ6 169 aa9.06□□□□□ -0.96
CDH1-201ENST00000261769 PRUNE2Q8WUY3 3088 aa9.06□□□□□ -0.96
CDH1-201ENST00000261769 WDFY4Q6ZS81 3184 aa9.06□□□□□ -0.96
CDH1-201ENST00000261769 TRBV7-7A0A0K0K1E9 115 aa9.05□□□□□ -0.96
CDH1-201ENST00000261769 SPINK1P00995 79 aa9.05□□□□□ -0.96
CDH1-201ENST00000261769 CDIP1Q9H305 208 aa9.05□□□□□ -0.96
CDH1-201ENST00000261769 PSORS1C2Q9UIG4 136 aa9.04□□□□□ -0.96
CDH1-201ENST00000261769 TMEM254Q8TBM7 123 aa9.04□□□□□ -0.96
CDH1-201ENST00000261769 Q96NJ1 140 aa9.03□□□□□ -0.96
CDH1-201ENST00000261769 A0A1W2PNN7 141 aa9.02□□□□□ -0.96
CDH1-201ENST00000261769 SMIM29Q86T20 159 aa9.02□□□□□ -0.97
CDH1-201ENST00000261769 BRCA2P51587 3418 aa9□□□□□ -0.97
CDH1-201ENST00000261769 A6NED7 52 aa8.99□□□□□ -0.97
CDH1-201ENST00000261769 C7orf65Q6ZTY9 151 aa8.98□□□□□ -0.97
CDH1-201ENST00000261769 A8MWP4 228 aa8.97□□□□□ -0.97
CDH1-201ENST00000261769 SMCPP49901 116 aaPredicted RBP8.97□□□□□ -0.97
CDH1-201ENST00000261769 H3BPC8 53 aa8.96□□□□□ -0.97
CDH1-201ENST00000261769 IGFL1Q6UW32 110 aa8.96□□□□□ -0.98
CDH1-201ENST00000261769 UBR5O95071 2799 aaPredicted RBP8.96□□□□□ -0.98
CDH1-201ENST00000261769 NBEAL1Q6ZS30 2694 aa8.96□□□□□ -0.98
CDH1-201ENST00000261769 IGLV5-37A0A075B6J1 123 aa8.96□□□□□ -0.98
CDH1-201ENST00000261769 SPRR4Q96PI1 79 aa8.95□□□□□ -0.98
CDH1-201ENST00000261769 TRIOO75962 3097 aa8.95□□□□□ -0.98
CDH1-201ENST00000261769 TRAV22A0A0B4J277 110 aa8.94□□□□□ -0.98
CDH1-201ENST00000261769 PRO0461Q9UI25 63 aa8.94□□□□□ -0.98
CDH1-201ENST00000261769 EIF4EBP3O60516 100 aaPredicted RBP8.94□□□□□ -0.98
CDH1-201ENST00000261769 SMIM26A0A096LP01 95 aa8.94□□□□□ -0.98
CDH1-201ENST00000261769 Q8N377 158 aa8.93□□□□□ -0.98
CDH1-201ENST00000261769 MAP1AP78559 2803 aaPredicted RBP8.93□□□□□ -0.98
CDH1-201ENST00000261769 COX6B2Q6YFQ2 88 aa8.93□□□□□ -0.98
CDH1-201ENST00000261769 MRPL34Q9BQ48 92 aaKnown RBP8.92□□□□□ -0.98
CDH1-201ENST00000261769 LAMA2P24043 3122 aaKnown RBP8.91□□□□□ -0.98
CDH1-201ENST00000261769 ACYP2P14621 99 aa8.91□□□□□ -0.98
CDH1-201ENST00000261769 FLNCQ14315 2725 aa8.91□□□□□ -0.98
CDH1-201ENST00000261769 LCE6AA0A183 80 aa8.89□□□□□ -0.99
CDH1-201ENST00000261769 LOC101927531A0A1B0GV80 90 aa8.89□□□□□ -0.99
CDH1-201ENST00000261769 ANAPC11Q9NYG5 84 aa8.89□□□□□ -0.99
CDH1-201ENST00000261769 CFAP54Q96N23 3096 aa8.88□□□□□ -0.99
CDH1-201ENST00000261769 C4orf26Q17RF5 130 aa8.85□□□□□ -0.99
CDH1-201ENST00000261769 PRO0628Q9UI54 55 aa8.85□□□□□ -0.99
CDH1-201ENST00000261769 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.85□□□□□ -0.99
CDH1-201ENST00000261769 A0A1B0GVX0 72 aa8.85□□□□□ -0.99
CDH1-201ENST00000261769 ITPR2Q14571 2701 aa8.84□□□□□ -0.99
CDH1-201ENST00000261769 ERC2-IT1O76042 136 aa8.84□□□□□ -0.99
CDH1-201ENST00000261769 PRR15Q8IV56 129 aa8.84□□□□□ -0.99
CDH1-201ENST00000261769 OBSCN-AS1Q96MR7 158 aa8.84□□□□□ -0.99
CDH1-201ENST00000261769 C8orf17Q9NRJ1 99 aa8.84□□□□□ -0.99
CDH1-201ENST00000261769 K7EQZ3 153 aa8.83□□□□□ -1
CDH1-201ENST00000261769 DSCR10P59022 87 aa8.83□□□□□ -1
CDH1-201ENST00000261769 UNC80Q8N2C7 3258 aa8.82□□□□□ -1
CDH1-201ENST00000261769 KRTAP21-3Q3LHN1 58 aa8.82□□□□□ -1
CDH1-201ENST00000261769 C9orf92A6NGG3 77 aa8.82□□□□□ -1
CDH1-201ENST00000261769 PLAC8Q9NZF1 115 aa8.81□□□□□ -1
CDH1-201ENST00000261769 NSD1Q96L73 2696 aaPredicted RBP8.8□□□□□ -1
CDH1-201ENST00000261769 FAM229BQ4G0N7 80 aa8.79□□□□□ -1
CDH1-201ENST00000261769 PMAIP1Q13794 54 aa8.79□□□□□ -1
CDH1-201ENST00000261769 CD164Q04900 197 aa8.78□□□□□ -1
CDH1-201ENST00000261769 ITPR1Q14643 2758 aa8.78□□□□□ -1
CDH1-201ENST00000261769 A0A0G2JQZ4 141 aa8.75□□□□□ -1.01
CDH1-201ENST00000261769 A0A1B0GU69 56 aa8.75□□□□□ -1.01
CDH1-201ENST00000261769 RPS28P62857 69 aaKnown RBP8.75□□□□□ -1.01
CDH1-201ENST00000261769 RBM12B-AS1Q9P1G2 102 aa8.74□□□□□ -1.01
CDH1-201ENST00000261769 PRR26Q8N8Z3 221 aa8.74□□□□□ -1.01
CDH1-201ENST00000261769 IGLV5-48A0A075B6I7 105 aa8.73□□□□□ -1.01
CDH1-201ENST00000261769 HIVEP1P15822 2718 aa8.72□□□□□ -1.01
CDH1-201ENST00000261769 A0A1W2PNM2 257 aa8.72□□□□□ -1.01
CDH1-201ENST00000261769 XIRP2A4UGR9 3374 aa8.72□□□□□ -1.01
CDH1-201ENST00000261769 VPS13AQ96RL7 3174 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms