RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 DNAH2Q9P225 4427 aa14.37□□□□□ -0.11
SIX3-201ENST00000260653 LINC01600Q96MT4 127 aa14.37□□□□□ -0.11
SIX3-201ENST00000260653 PLA2G2DQ9UNK4 145 aa14.36□□□□□ -0.11
SIX3-201ENST00000260653 KRTAP7-1Q8IUC3 87 aa14.36□□□□□ -0.11
SIX3-201ENST00000260653 A0A096LNI7 61 aa14.35□□□□□ -0.11
SIX3-201ENST00000260653 C3orf22Q8N5N4 141 aa14.35□□□□□ -0.11
SIX3-201ENST00000260653 DNAL4O96015 105 aa14.34□□□□□ -0.11
SIX3-201ENST00000260653 C7orf33Q8WU49 177 aa14.34□□□□□ -0.11
SIX3-201ENST00000260653 LINC00476Q8WZB0 136 aa14.34□□□□□ -0.11
SIX3-201ENST00000260653 ZNF73O43830 326 aaPredicted RBP14.33□□□□□ -0.12
SIX3-201ENST00000260653 DIRC1Q969H9 104 aa14.33□□□□□ -0.12
SIX3-201ENST00000260653 IGKV2-24A0A0C4DH68 120 aa14.32□□□□□ -0.12
SIX3-201ENST00000260653 BAALC-AS2P0C853 105 aa14.32□□□□□ -0.12
SIX3-201ENST00000260653 Q8N814 137 aa14.32□□□□□ -0.12
SIX3-201ENST00000260653 C16orf90A8MZG2 172 aa14.31□□□□□ -0.12
SIX3-201ENST00000260653 IGLV5-37A0A075B6J1 123 aa14.31□□□□□ -0.12
SIX3-201ENST00000260653 A0A087WTM6 91 aa14.3□□□□□ -0.12
SIX3-201ENST00000260653 TEX49A0A1B0GTD5 131 aa14.3□□□□□ -0.12
SIX3-201ENST00000260653 LINC00336Q6ZUF6 198 aa14.29□□□□□ -0.12
SIX3-201ENST00000260653 C9orf163Q8N9P6 203 aa14.29□□□□□ -0.12
SIX3-201ENST00000260653 DNAH6Q9C0G6 4158 aa14.29□□□□□ -0.12
SIX3-201ENST00000260653 UQCRQO14949 82 aa14.29□□□□□ -0.12
SIX3-201ENST00000260653 LINC00575Q6W349 94 aa14.29□□□□□ -0.12
SIX3-201ENST00000260653 ALMS1Q8TCU4 4167 aa14.28□□□□□ -0.12
SIX3-201ENST00000260653 FAM236DA0A1B0GTK5 79 aa14.28□□□□□ -0.12
SIX3-201ENST00000260653 FAM236CP0DP71 79 aa14.28□□□□□ -0.12
SIX3-201ENST00000260653 C1orf195Q5TG92 126 aa14.28□□□□□ -0.12
SIX3-201ENST00000260653 C22orf24Q9Y442 160 aa14.28□□□□□ -0.12
SIX3-201ENST00000260653 C3orf84H3BNL1 204 aa14.27□□□□□ -0.13
SIX3-201ENST00000260653 C1orf134Q5TEV5 83 aa14.27□□□□□ -0.13
SIX3-201ENST00000260653 RPL37AP8A6NKH3 93 aa14.26□□□□□ -0.13
SIX3-201ENST00000260653 DPH3Q96FX2 82 aa14.26□□□□□ -0.13
SIX3-201ENST00000260653 OXTP01178 125 aa14.26□□□□□ -0.13
SIX3-201ENST00000260653 CHTF8P0CG12 524 aa14.25□□□□□ -0.13
SIX3-201ENST00000260653 KCNQ1DNQ9H478 68 aa14.25□□□□□ -0.13
SIX3-201ENST00000260653 LINC00167Q96N53 147 aa14.25□□□□□ -0.13
SIX3-201ENST00000260653 GAGE2AQ6NT46 116 aa14.24□□□□□ -0.13
SIX3-201ENST00000260653 MRPL55Q7Z7F7 128 aaKnown RBP14.24□□□□□ -0.13
SIX3-201ENST00000260653 COX7BP24311 80 aa14.24□□□□□ -0.13
SIX3-201ENST00000260653 ELOF1P60002 83 aaKnown RBP14.24□□□□□ -0.13
SIX3-201ENST00000260653 HECTD4Q9Y4D8 3996 aa14.23□□□□□ -0.13
SIX3-201ENST00000260653 A0A1W2PNN7 141 aa14.23□□□□□ -0.13
SIX3-201ENST00000260653 IGLV1-50A0A075B6I6 118 aa14.22□□□□□ -0.13
SIX3-201ENST00000260653 hADV29S1A0JD25 119 aa14.22□□□□□ -0.13
SIX3-201ENST00000260653 ORMDL1Q9P0S3 153 aa14.22□□□□□ -0.13
SIX3-201ENST00000260653 TRBV7-6A0A0J9YX20 115 aa14.22□□□□□ -0.13
SIX3-201ENST00000260653 FUSP35637 526 aaKnown RBP eCLIP14.22□□□□□ -0.13
SIX3-201ENST00000260653 SDIM1Q6ZPB5 146 aa14.22□□□□□ -0.13
SIX3-201ENST00000260653 LINC00528Q8N1L1 170 aa14.18□□□□□ -0.14
SIX3-201ENST00000260653 DNAH17Q9UFH2 4485 aa14.18□□□□□ -0.14
SIX3-201ENST00000260653 PRYO14603 147 aa14.16□□□□□ -0.14
SIX3-201ENST00000260653 PANO1I0J062 215 aa14.16□□□□□ -0.14
SIX3-201ENST00000260653 HYDINQ4G0P3 5121 aa14.16□□□□□ -0.14
SIX3-201ENST00000260653 Q6ZQY7 126 aa14.15□□□□□ -0.14
SIX3-201ENST00000260653 RTL8CO15255 209 aa14.14□□□□□ -0.15
SIX3-201ENST00000260653 CRYGAP11844 174 aa14.14□□□□□ -0.15
SIX3-201ENST00000260653 FRAS1Q86XX4 4008 aa14.13□□□□□ -0.15
SIX3-201ENST00000260653 KRTAP4-16G5E9R7 235 aaPredicted RBP14.13□□□□□ -0.15
SIX3-201ENST00000260653 SPRR1AP35321 89 aa14.13□□□□□ -0.15
SIX3-201ENST00000260653 TRBV7-7A0A0K0K1E9 115 aa14.12□□□□□ -0.15
SIX3-201ENST00000260653 TMEM258P61165 79 aa14.12□□□□□ -0.15
SIX3-201ENST00000260653 TNP2Q05952 138 aa14.12□□□□□ -0.15
SIX3-201ENST00000260653 C4orf48Q5BLP8 95 aa14.12□□□□□ -0.15
SIX3-201ENST00000260653 FAM19A1Q7Z5A9 133 aa14.12□□□□□ -0.15
SIX3-201ENST00000260653 LINC00474Q9P2X8 69 aa14.11□□□□□ -0.15
SIX3-201ENST00000260653 TMEM256-PLSCR3K7ERE1 68 aa14.11□□□□□ -0.15
SIX3-201ENST00000260653 DSCR8Q96T75 97 aa14.11□□□□□ -0.15
SIX3-201ENST00000260653 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.1□□□□□ -0.15
SIX3-201ENST00000260653 PHF5AQ7RTV0 110 aaKnown RBP14.1□□□□□ -0.15
SIX3-201ENST00000260653 ETDCA0A1B0GVM5 59 aa14.09□□□□□ -0.15
SIX3-201ENST00000260653 Q6ZRX8 168 aa14.09□□□□□ -0.15
SIX3-201ENST00000260653 COX7CP15954 63 aa14.08□□□□□ -0.15
SIX3-201ENST00000260653 REG3GQ6UW15 175 aa14.08□□□□□ -0.16
SIX3-201ENST00000260653 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.08□□□□□ -0.16
SIX3-201ENST00000260653 SPACA4Q8TDM5 124 aa14.07□□□□□ -0.16
SIX3-201ENST00000260653 IGLV5-52A0A0A0MRZ9 124 aa14.06□□□□□ -0.16
SIX3-201ENST00000260653 OBSCN-AS1Q96MR7 158 aa14.06□□□□□ -0.16
SIX3-201ENST00000260653 Q9BRP9 147 aa14.06□□□□□ -0.16
SIX3-201ENST00000260653 KRTAP11-1Q8IUC1 163 aa14.05□□□□□ -0.16
SIX3-201ENST00000260653 INAFM2P0DMQ5 153 aa14.05□□□□□ -0.16
SIX3-201ENST00000260653 C14orf132Q9NPU4 83 aa14.05□□□□□ -0.16
SIX3-201ENST00000260653 A0A0U1RQV1 116 aa14.04□□□□□ -0.16
SIX3-201ENST00000260653 UBE2BP63146 152 aa14.03□□□□□ -0.16
SIX3-201ENST00000260653 IMUPQ9GZP8 106 aa14.01□□□□□ -0.17
SIX3-201ENST00000260653 DHRS4-AS1Q9P1J3 65 aa14.01□□□□□ -0.17
SIX3-201ENST00000260653 DNAH11Q96DT5 4516 aa14.01□□□□□ -0.17
SIX3-201ENST00000260653 SACSQ9NZJ4 4579 aa14□□□□□ -0.17
SIX3-201ENST00000260653 CYSTM1Q9H1C7 97 aa14□□□□□ -0.17
SIX3-201ENST00000260653 FAT2Q9NYQ8 4349 aa13.99□□□□□ -0.17
SIX3-201ENST00000260653 LAMTOR3Q9UHA4 124 aa13.99□□□□□ -0.17
SIX3-201ENST00000260653 JMJD7-PLA2G4BH0Y9G9 81 aa13.98□□□□□ -0.17
SIX3-201ENST00000260653 KRTAP10-2P60368 255 aa13.98□□□□□ -0.17
SIX3-201ENST00000260653 H3BQ85 93 aa13.97□□□□□ -0.17
SIX3-201ENST00000260653 DNAH5Q8TE73 4624 aa13.96□□□□□ -0.17
SIX3-201ENST00000260653 PRLHP81277 87 aa13.96□□□□□ -0.17
SIX3-201ENST00000260653 EPM2AB3EWF7 344 aa13.96□□□□□ -0.18
SIX3-201ENST00000260653 ERC2-IT1O76042 136 aa13.96□□□□□ -0.18
SIX3-201ENST00000260653 FAM240AA0A1B0GVK7 77 aa13.95□□□□□ -0.18
SIX3-201ENST00000260653 GHRHP01286 108 aa13.95□□□□□ -0.18
SIX3-201ENST00000260653 DEFB105AQ8NG35 78 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms