RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 ATP5EP56381 51 aaPredicted RBP12.51□□□□□ -0.41
SNX4-201ENST00000251775 H3BNG1 76 aa12.51□□□□□ -0.41
SNX4-201ENST00000251775 Q8N9L7 120 aa12.51□□□□□ -0.41
SNX4-201ENST00000251775 KRTAP24-1Q3LI83 254 aa12.5□□□□□ -0.41
SNX4-201ENST00000251775 ERC2-IT1O76042 136 aa12.49□□□□□ -0.41
SNX4-201ENST00000251775 VPREB1P12018 145 aa12.49□□□□□ -0.41
SNX4-201ENST00000251775 EGFEM1PQ0D2K5 195 aa12.48□□□□□ -0.41
SNX4-201ENST00000251775 KRTAP26-1Q6PEX3 210 aa12.48□□□□□ -0.41
SNX4-201ENST00000251775 IGKV4-1P06312 121 aa12.48□□□□□ -0.41
SNX4-201ENST00000251775 HIGD2BQ4VC39 106 aa12.47□□□□□ -0.41
SNX4-201ENST00000251775 ESRGQ1W209 222 aa12.46□□□□□ -0.41
SNX4-201ENST00000251775 LINC00528Q8N1L1 170 aa12.46□□□□□ -0.41
SNX4-201ENST00000251775 OCR1Q9BZK8 76 aa12.45□□□□□ -0.42
SNX4-201ENST00000251775 PKD1L1Q8TDX9 2849 aa12.44□□□□□ -0.42
SNX4-201ENST00000251775 TENM3Q9P273 2699 aa12.44□□□□□ -0.42
SNX4-201ENST00000251775 M0R378 163 aa12.43□□□□□ -0.42
SNX4-201ENST00000251775 A0A0U1RQV1 116 aa12.42□□□□□ -0.42
SNX4-201ENST00000251775 FAM229BQ4G0N7 80 aa12.42□□□□□ -0.42
SNX4-201ENST00000251775 CAMK2N2Q96S95 79 aa12.42□□□□□ -0.42
SNX4-201ENST00000251775 C15orf56Q8N910 161 aa12.41□□□□□ -0.42
SNX4-201ENST00000251775 PRYO14603 147 aa12.41□□□□□ -0.42
SNX4-201ENST00000251775 STAB1Q9NY15 2570 aa12.4□□□□□ -0.42
SNX4-201ENST00000251775 DEFB131BA0A096LNP1 70 aa12.39□□□□□ -0.43
SNX4-201ENST00000251775 Q6ZRU5 148 aa12.39□□□□□ -0.43
SNX4-201ENST00000251775 C1orf43Q9BWL3 253 aa12.38□□□□□ -0.43
SNX4-201ENST00000251775 C3orf84H3BNL1 204 aa12.38□□□□□ -0.43
SNX4-201ENST00000251775 C11orf45Q8TAV5 145 aa12.38□□□□□ -0.43
SNX4-201ENST00000251775 FBN1P35555 2871 aaKnown RBP12.37□□□□□ -0.43
SNX4-201ENST00000251775 ANK2Q01484 3957 aa12.36□□□□□ -0.43
SNX4-201ENST00000251775 CMYA5Q8N3K9 4069 aa12.35□□□□□ -0.43
SNX4-201ENST00000251775 LINC01556Q5JQF7 62 aa12.35□□□□□ -0.43
SNX4-201ENST00000251775 HIGD2AQ9BW72 106 aa12.35□□□□□ -0.43
SNX4-201ENST00000251775 FUSP35637 526 aaKnown RBP eCLIP12.34□□□□□ -0.43
SNX4-201ENST00000251775 IGKV2D-24A0A075B6R9 120 aa12.33□□□□□ -0.44
SNX4-201ENST00000251775 MPLKIPQ8TAP9 179 aa12.33□□□□□ -0.44
SNX4-201ENST00000251775 BRK1Q8WUW1 75 aa12.32□□□□□ -0.44
SNX4-201ENST00000251775 PKIGQ9Y2B9 76 aa12.32□□□□□ -0.44
SNX4-201ENST00000251775 Q8N377 158 aa12.31□□□□□ -0.44
SNX4-201ENST00000251775 Q6ZRP5 223 aa12.3□□□□□ -0.44
SNX4-201ENST00000251775 DEFB105AQ8NG35 78 aa12.3□□□□□ -0.44
SNX4-201ENST00000251775 FLNBO75369 2602 aaKnown RBP12.3□□□□□ -0.44
SNX4-201ENST00000251775 IGLV5-48A0A075B6I7 105 aa12.29□□□□□ -0.44
SNX4-201ENST00000251775 SMIM29Q86T20 159 aa12.28□□□□□ -0.44
SNX4-201ENST00000251775 PRB2P02812 416 aaPredicted RBP12.27□□□□□ -0.45
SNX4-201ENST00000251775 DNAH10OSP0CZ25 163 aa12.27□□□□□ -0.45
SNX4-201ENST00000251775 FAM30AQ9NZY2 134 aa12.26□□□□□ -0.45
SNX4-201ENST00000251775 MAST4O15021 2626 aa12.26□□□□□ -0.45
SNX4-201ENST00000251775 SYCNQ0VAF6 134 aa12.26□□□□□ -0.45
SNX4-201ENST00000251775 KCNQ1DNQ9H478 68 aa12.26□□□□□ -0.45
SNX4-201ENST00000251775 DNAH3Q8TD57 4116 aa12.25□□□□□ -0.45
SNX4-201ENST00000251775 NOTCH1P46531 2555 aa12.25□□□□□ -0.45
SNX4-201ENST00000251775 LCE6AA0A183 80 aa12.23□□□□□ -0.45
SNX4-201ENST00000251775 A0A1W2PNM2 257 aa12.23□□□□□ -0.45
SNX4-201ENST00000251775 SERTAD4-AS1Q5TG53 156 aa12.22□□□□□ -0.45
SNX4-201ENST00000251775 F8WDY8 70 aa12.22□□□□□ -0.45
SNX4-201ENST00000251775 LINC00588Q9Y4M8 146 aa12.22□□□□□ -0.45
SNX4-201ENST00000251775 C7orf33Q8WU49 177 aa12.21□□□□□ -0.45
SNX4-201ENST00000251775 NKAPP1Q8N9T2 125 aa12.2□□□□□ -0.46
SNX4-201ENST00000251775 A0A1B0GW54 56 aa12.19□□□□□ -0.46
SNX4-201ENST00000251775 hDV103S1A0JD37 113 aa12.19□□□□□ -0.46
SNX4-201ENST00000251775 CASC10Q5T4H9 136 aa12.18□□□□□ -0.46
SNX4-201ENST00000251775 TNP2Q05952 138 aa12.18□□□□□ -0.46
SNX4-201ENST00000251775 Q9BRP9 147 aa12.17□□□□□ -0.46
SNX4-201ENST00000251775 C1orf137Q5JT78 98 aa12.16□□□□□ -0.46
SNX4-201ENST00000251775 Q6ZRX8 168 aa12.15□□□□□ -0.46
SNX4-201ENST00000251775 Q8NBF4 154 aa12.15□□□□□ -0.46
SNX4-201ENST00000251775 ZCCHC13Q8WW36 166 aaKnown RBP12.15□□□□□ -0.46
SNX4-201ENST00000251775 K7EIL1 84 aa12.15□□□□□ -0.46
SNX4-201ENST00000251775 DSCR10P59022 87 aa12.15□□□□□ -0.46
SNX4-201ENST00000251775 DHRS4-AS1Q9P1J3 65 aa12.15□□□□□ -0.46
SNX4-201ENST00000251775 BAHCC1Q9P281 2608 aa12.15□□□□□ -0.46
SNX4-201ENST00000251775 KRTAP4-16G5E9R7 235 aaPredicted RBP12.14□□□□□ -0.47
SNX4-201ENST00000251775 ST20-AS1Q8NBB2 130 aa12.13□□□□□ -0.47
SNX4-201ENST00000251775 C1orf195Q5TG92 126 aa12.13□□□□□ -0.47
SNX4-201ENST00000251775 COL6A5A8TX70 2615 aa12.13□□□□□ -0.47
SNX4-201ENST00000251775 RPL37AP8A6NKH3 93 aa12.12□□□□□ -0.47
SNX4-201ENST00000251775 TLX1NBP0CAT3 122 aa12.12□□□□□ -0.47
SNX4-201ENST00000251775 C1orf64Q8NEQ6 169 aa12.12□□□□□ -0.47
SNX4-201ENST00000251775 LRCOL1A6NCL2 159 aa12.12□□□□□ -0.47
SNX4-201ENST00000251775 SPRR4Q96PI1 79 aa12.12□□□□□ -0.47
SNX4-201ENST00000251775 K7EQZ3 153 aa12.11□□□□□ -0.47
SNX4-201ENST00000251775 ETDCA0A1B0GVM5 59 aa12.11□□□□□ -0.47
SNX4-201ENST00000251775 NBEAL1Q6ZS30 2694 aa12.1□□□□□ -0.47
SNX4-201ENST00000251775 FAM168BA1KXE4 195 aa12.09□□□□□ -0.47
SNX4-201ENST00000251775 SPRR1AP35321 89 aa12.08□□□□□ -0.48
SNX4-201ENST00000251775 HUWE1Q7Z6Z7 4374 aaKnown RBP12.08□□□□□ -0.48
SNX4-201ENST00000251775 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.08□□□□□ -0.48
SNX4-201ENST00000251775 PLA2G2DQ9UNK4 145 aa12.08□□□□□ -0.48
SNX4-201ENST00000251775 IGLV1-50A0A075B6I6 118 aa12.07□□□□□ -0.48
SNX4-201ENST00000251775 Q1T7F1 81 aa12.07□□□□□ -0.48
SNX4-201ENST00000251775 KRTAP7-1Q8IUC3 87 aa12.06□□□□□ -0.48
SNX4-201ENST00000251775 DNAH1Q9P2D7 4330 aa12.04□□□□□ -0.48
SNX4-201ENST00000251775 IGLV5-37A0A075B6J1 123 aa12.03□□□□□ -0.48
SNX4-201ENST00000251775 HCG22E2RYF7 251 aa12.02□□□□□ -0.49
SNX4-201ENST00000251775 CYP4F30PQ9H0H9 118 aa12.01□□□□□ -0.49
SNX4-201ENST00000251775 PRR4Q16378 134 aa12□□□□□ -0.49
SNX4-201ENST00000251775 V9GYY9 64 aa12□□□□□ -0.49
SNX4-201ENST00000251775 PRR15Q8IV56 129 aa11.99□□□□□ -0.49
SNX4-201ENST00000251775 PSCAO43653 123 aa11.98□□□□□ -0.49
SNX4-201ENST00000251775 A0A0G2JQZ4 141 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms