RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 PAM16Q9Y3D7 125 aa5.99□□□□□ -1.45
VPS50-201ENST00000251739 HSD52Q0P140 79 aa5.98□□□□□ -1.45
VPS50-201ENST00000251739 NKAPP1Q8N9T2 125 aa5.98□□□□□ -1.45
VPS50-201ENST00000251739 VPREB1P12018 145 aa5.97□□□□□ -1.45
VPS50-201ENST00000251739 PMVKQ15126 192 aa5.97□□□□□ -1.45
VPS50-201ENST00000251739 GNB1LQ9BYB4 327 aa5.97□□□□□ -1.45
VPS50-201ENST00000251739 TRAPPC1Q9Y5R8 145 aa5.97□□□□□ -1.45
VPS50-201ENST00000251739 IGKV2-28A0A075B6P5 120 aa5.96□□□□□ -1.46
VPS50-201ENST00000251739 IGKV2D-28P01615 120 aa5.96□□□□□ -1.46
VPS50-201ENST00000251739 UBE2AP49459 152 aa5.96□□□□□ -1.46
VPS50-201ENST00000251739 TPRXLQ17RH7 258 aa5.96□□□□□ -1.46
VPS50-201ENST00000251739 LINC00304Q8N9R0 145 aa5.96□□□□□ -1.46
VPS50-201ENST00000251739 RETNLBQ9BQ08 111 aa5.96□□□□□ -1.46
VPS50-201ENST00000251739 A0A096LNJ9 63 aa5.95□□□□□ -1.46
VPS50-201ENST00000251739 ATP5LO75964 103 aa5.95□□□□□ -1.46
VPS50-201ENST00000251739 HERV-K104P63124 156 aa5.95□□□□□ -1.46
VPS50-201ENST00000251739 PRLHP81277 87 aa5.95□□□□□ -1.46
VPS50-201ENST00000251739 Q8NDZ9 215 aa5.95□□□□□ -1.46
VPS50-201ENST00000251739 TMEM126AQ9H061 195 aa5.95□□□□□ -1.46
VPS50-201ENST00000251739 H3BRM9 83 aa5.94□□□□□ -1.46
VPS50-201ENST00000251739 ZNF22P17026 224 aaPredicted RBP5.94□□□□□ -1.46
VPS50-201ENST00000251739 HINT1P49773 126 aaPredicted RBP5.94□□□□□ -1.46
VPS50-201ENST00000251739 BAGE3Q86Y29 109 aa5.94□□□□□ -1.46
VPS50-201ENST00000251739 SND1-IT1Q9HBX3 110 aa5.94□□□□□ -1.46
VPS50-201ENST00000251739 HSPB8Q9UJY1 196 aa5.94□□□□□ -1.46
VPS50-201ENST00000251739 M0R378 163 aa5.93□□□□□ -1.46
VPS50-201ENST00000251739 PFN2P35080 140 aa5.93□□□□□ -1.46
VPS50-201ENST00000251739 ERG28Q9UKR5 140 aa5.93□□□□□ -1.46
VPS50-201ENST00000251739 A4D1N5 150 aa5.92□□□□□ -1.46
VPS50-201ENST00000251739 F8W1H4 67 aa5.92□□□□□ -1.46
VPS50-201ENST00000251739 K7EP34 96 aa5.92□□□□□ -1.46
VPS50-201ENST00000251739 COX17Q14061 63 aa5.92□□□□□ -1.46
VPS50-201ENST00000251739 PLEKHB2Q96CS7 222 aa5.92□□□□□ -1.46
VPS50-201ENST00000251739 URB1-AS1Q96HZ7 61 aa5.92□□□□□ -1.46
VPS50-201ENST00000251739 IGKV2D-26A0A0A0MRZ7 120 aa5.91□□□□□ -1.46
VPS50-201ENST00000251739 TAX1BP3O14907 124 aa5.91□□□□□ -1.46
VPS50-201ENST00000251739 FABP2P12104 132 aa5.91□□□□□ -1.46
VPS50-201ENST00000251739 SLC25A34Q6PIV7 304 aa5.91□□□□□ -1.46
VPS50-201ENST00000251739 FAM19A1Q7Z5A9 133 aa5.91□□□□□ -1.46
VPS50-201ENST00000251739 ZNF625Q96I27 306 aaPredicted RBP5.91□□□□□ -1.46
VPS50-201ENST00000251739 IGLV7-46A0A075B6I9 117 aa5.9□□□□□ -1.46
VPS50-201ENST00000251739 KRTDAPP60985 99 aa5.9□□□□□ -1.46
VPS50-201ENST00000251739 C3orf22Q8N5N4 141 aa5.9□□□□□ -1.46
VPS50-201ENST00000251739 ANAPC13Q9BS18 74 aa5.9□□□□□ -1.46
VPS50-201ENST00000251739 C11orf86A6NJI1 115 aa5.89□□□□□ -1.47
VPS50-201ENST00000251739 C18orf32Q8TCD1 76 aa5.89□□□□□ -1.47
VPS50-201ENST00000251739 HBDP02042 147 aa5.88□□□□□ -1.47
VPS50-201ENST00000251739 BVES-AS1Q5T3Y7 98 aa5.88□□□□□ -1.47
VPS50-201ENST00000251739 SFTA2Q6UW10 78 aa5.88□□□□□ -1.47
VPS50-201ENST00000251739 SPRR4Q96PI1 79 aa5.88□□□□□ -1.47
VPS50-201ENST00000251739 BOD1L2Q8IYS8 172 aa5.87□□□□□ -1.47
VPS50-201ENST00000251739 OR13C6PQ8NH95 151 aa5.87□□□□□ -1.47
VPS50-201ENST00000251739 HIGD2AQ9BW72 106 aa5.86□□□□□ -1.47
VPS50-201ENST00000251739 PPDPFQ9H3Y8 114 aa5.86□□□□□ -1.47
VPS50-201ENST00000251739 KRTAP4-16G5E9R7 235 aaPredicted RBP5.85□□□□□ -1.47
VPS50-201ENST00000251739 SPRR1AP35321 89 aa5.85□□□□□ -1.47
VPS50-201ENST00000251739 SPAG11AQ6PDA7 123 aa5.85□□□□□ -1.47
VPS50-201ENST00000251739 FP248Q71RG6 208 aaPredicted RBP5.85□□□□□ -1.47
VPS50-201ENST00000251739 SERF1AO75920 110 aa5.84□□□□□ -1.47
VPS50-201ENST00000251739 KRTAP13-3Q3SY46 172 aa5.84□□□□□ -1.47
VPS50-201ENST00000251739 TMEM170BQ5T4T1 132 aa5.84□□□□□ -1.47
VPS50-201ENST00000251739 SMIM20Q8N5G0 67 aa5.84□□□□□ -1.47
VPS50-201ENST00000251739 SPCS1Q9Y6A9 102 aa5.84□□□□□ -1.47
VPS50-201ENST00000251739 TMEM223A0PJW6 202 aa5.83□□□□□ -1.48
VPS50-201ENST00000251739 PRYO14603 147 aa5.83□□□□□ -1.48
VPS50-201ENST00000251739 LINC00337Q8N6G1 96 aa5.83□□□□□ -1.48
VPS50-201ENST00000251739 SS18L2Q9UHA2 77 aa5.83□□□□□ -1.48
VPS50-201ENST00000251739 A0A1W2PPM0 123 aa5.82□□□□□ -1.48
VPS50-201ENST00000251739 LINC00158P58513 81 aa5.82□□□□□ -1.48
VPS50-201ENST00000251739 LINC00483Q53H64 154 aa5.82□□□□□ -1.48
VPS50-201ENST00000251739 LYRM7Q5U5X0 104 aa5.82□□□□□ -1.48
VPS50-201ENST00000251739 KCNQ1DNQ9H478 68 aa5.82□□□□□ -1.48
VPS50-201ENST00000251739 ZNF706Q9Y5V0 76 aaPredicted RBP5.82□□□□□ -1.48
VPS50-201ENST00000251739 TRAV12-1A0A0B4J245 112 aa5.81□□□□□ -1.48
VPS50-201ENST00000251739 HSBP1O75506 76 aa5.81□□□□□ -1.48
VPS50-201ENST00000251739 C3orf79P0CE67 100 aa5.81□□□□□ -1.48
VPS50-201ENST00000251739 SMIM13P0DJ93 91 aa5.81□□□□□ -1.48
VPS50-201ENST00000251739 RPS28P62857 69 aaKnown RBP5.81□□□□□ -1.48
VPS50-201ENST00000251739 ASB16-AS1Q495Z4 193 aa5.81□□□□□ -1.48
VPS50-201ENST00000251739 Q6Q795 121 aa5.81□□□□□ -1.48
VPS50-201ENST00000251739 Q8NBF4 154 aa5.81□□□□□ -1.48
VPS50-201ENST00000251739 SPANXB1Q9NS25 103 aaPredicted RBP5.81□□□□□ -1.48
VPS50-201ENST00000251739 A0A0U1RRA0 63 aa5.8□□□□□ -1.48
VPS50-201ENST00000251739 DAND5Q8N907 189 aa5.8□□□□□ -1.48
VPS50-201ENST00000251739 SMCR5Q8TEV8 140 aa5.8□□□□□ -1.48
VPS50-201ENST00000251739 TRBV10-3A0A0K0K1G6 114 aa5.79□□□□□ -1.48
VPS50-201ENST00000251739 A0A1B0GX51 115 aa5.79□□□□□ -1.48
VPS50-201ENST00000251739 SPINK1P00995 79 aa5.79□□□□□ -1.48
VPS50-201ENST00000251739 MIR7-3HGQ8N6C7 128 aa5.79□□□□□ -1.48
VPS50-201ENST00000251739 CHCHD1Q96BP2 118 aaKnown RBP5.79□□□□□ -1.48
VPS50-201ENST00000251739 KRTAP4-1Q9BYQ7 146 aa5.79□□□□□ -1.48
VPS50-201ENST00000251739 NCR3O14931 201 aa5.78□□□□□ -1.48
VPS50-201ENST00000251739 COX8AP10176 69 aa5.78□□□□□ -1.48
VPS50-201ENST00000251739 IFI27L1Q96BM0 104 aa5.78□□□□□ -1.48
VPS50-201ENST00000251739 MAP1LC3CQ9BXW4 147 aa5.78□□□□□ -1.48
VPS50-201ENST00000251739 LOC107984156A0A0G2JMH3 177 aa5.77□□□□□ -1.49
VPS50-201ENST00000251739 H3BUT2 72 aa5.77□□□□□ -1.49
VPS50-201ENST00000251739 J3KT08 172 aa5.77□□□□□ -1.49
VPS50-201ENST00000251739 RPS29P62273 56 aaKnown RBP5.77□□□□□ -1.49
VPS50-201ENST00000251739 ARL17AQ8IVW1 177 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms