RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 K7EIL1 84 aa10.6□□□□□ -0.71
SIN3B-201ENST00000248054 OXTP01178 125 aa10.6□□□□□ -0.71
SIN3B-201ENST00000248054 KLKP1Q107X0 134 aa10.59□□□□□ -0.71
SIN3B-201ENST00000248054 WDFY3Q8IZQ1 3526 aa10.59□□□□□ -0.71
SIN3B-201ENST00000248054 NBDYA0A0U1RRE5 68 aa10.59□□□□□ -0.71
SIN3B-201ENST00000248054 Q8NBF4 154 aa10.58□□□□□ -0.72
SIN3B-201ENST00000248054 SMIM29Q86T20 159 aa10.58□□□□□ -0.72
SIN3B-201ENST00000248054 LINC00167Q96N53 147 aa10.58□□□□□ -0.72
SIN3B-201ENST00000248054 MGAQ8IWI9 3026 aa10.57□□□□□ -0.72
SIN3B-201ENST00000248054 C1orf64Q8NEQ6 169 aa10.57□□□□□ -0.72
SIN3B-201ENST00000248054 AKAP13Q12802 2813 aa10.57□□□□□ -0.72
SIN3B-201ENST00000248054 CIRBP-AS1Q8TBR5 109 aa10.57□□□□□ -0.72
SIN3B-201ENST00000248054 Q6ZRX8 168 aa10.56□□□□□ -0.72
SIN3B-201ENST00000248054 ERC2-IT1O76042 136 aa10.56□□□□□ -0.72
SIN3B-201ENST00000248054 PRLHP81277 87 aa10.55□□□□□ -0.72
SIN3B-201ENST00000248054 C16orf90A8MZG2 172 aa10.55□□□□□ -0.72
SIN3B-201ENST00000248054 IGLV6-57P01721 117 aa10.54□□□□□ -0.72
SIN3B-201ENST00000248054 ITPR3Q14573 2671 aa10.54□□□□□ -0.72
SIN3B-201ENST00000248054 PCOTHQ58A44 107 aa10.54□□□□□ -0.72
SIN3B-201ENST00000248054 USP24Q9UPU5 2620 aa10.53□□□□□ -0.72
SIN3B-201ENST00000248054 VPREB1P12018 145 aa10.52□□□□□ -0.73
SIN3B-201ENST00000248054 HELZ2Q9BYK8 2649 aaKnown RBP10.52□□□□□ -0.73
SIN3B-201ENST00000248054 NBEAQ8NFP9 2946 aa10.5□□□□□ -0.73
SIN3B-201ENST00000248054 FLNBO75369 2602 aaKnown RBP10.5□□□□□ -0.73
SIN3B-201ENST00000248054 DEFB116Q30KQ4 102 aa10.49□□□□□ -0.73
SIN3B-201ENST00000248054 DSPP15924 2871 aaKnown RBP10.49□□□□□ -0.73
SIN3B-201ENST00000248054 Q6ZRP5 223 aa10.48□□□□□ -0.73
SIN3B-201ENST00000248054 TRBV7-4A0A0J9YYF1 115 aa10.48□□□□□ -0.73
SIN3B-201ENST00000248054 FRYQ5TBA9 3013 aa10.48□□□□□ -0.73
SIN3B-201ENST00000248054 OBSCN-AS1Q96MR7 158 aa10.46□□□□□ -0.73
SIN3B-201ENST00000248054 LINC00476Q8WZB0 136 aa10.46□□□□□ -0.73
SIN3B-201ENST00000248054 DMXL1Q9Y485 3027 aa10.46□□□□□ -0.74
SIN3B-201ENST00000248054 BOD1L1Q8NFC6 3051 aa10.46□□□□□ -0.74
SIN3B-201ENST00000248054 C15orf56Q8N910 161 aa10.45□□□□□ -0.74
SIN3B-201ENST00000248054 LOC400499M0QZD8 3231 aa10.45□□□□□ -0.74
SIN3B-201ENST00000248054 TLX1NBP0CAT3 122 aa10.45□□□□□ -0.74
SIN3B-201ENST00000248054 CFAP46Q8IYW2 2715 aa10.44□□□□□ -0.74
SIN3B-201ENST00000248054 WWC2-AS2Q96NR7 200 aa10.44□□□□□ -0.74
SIN3B-201ENST00000248054 KCNQ1DNQ9H478 68 aa10.44□□□□□ -0.74
SIN3B-201ENST00000248054 FAM104AQ969W3 186 aa10.43□□□□□ -0.74
SIN3B-201ENST00000248054 FP248Q71RG6 208 aaPredicted RBP10.43□□□□□ -0.74
SIN3B-201ENST00000248054 PLA2G2DQ9UNK4 145 aa10.43□□□□□ -0.74
SIN3B-201ENST00000248054 ACYP2P14621 99 aa10.42□□□□□ -0.74
SIN3B-201ENST00000248054 RTL8CO15255 209 aa10.41□□□□□ -0.74
SIN3B-201ENST00000248054 TRAV22A0A0B4J277 110 aa10.41□□□□□ -0.74
SIN3B-201ENST00000248054 MOBPQ13875 183 aa10.4□□□□□ -0.75
SIN3B-201ENST00000248054 IGLV1-50A0A075B6I6 118 aa10.39□□□□□ -0.75
SIN3B-201ENST00000248054 LINC00528Q8N1L1 170 aa10.38□□□□□ -0.75
SIN3B-201ENST00000248054 PHF5AQ7RTV0 110 aaKnown RBP10.37□□□□□ -0.75
SIN3B-201ENST00000248054 IGSF10Q6WRI0 2623 aa10.37□□□□□ -0.75
SIN3B-201ENST00000248054 CD164Q04900 197 aa10.37□□□□□ -0.75
SIN3B-201ENST00000248054 A8MUN3 132 aa10.35□□□□□ -0.75
SIN3B-201ENST00000248054 EPM2AB3EWF7 344 aa10.35□□□□□ -0.75
SIN3B-201ENST00000248054 SERTAD4-AS1Q5TG53 156 aa10.35□□□□□ -0.75
SIN3B-201ENST00000248054 A8MWP4 228 aa10.34□□□□□ -0.75
SIN3B-201ENST00000248054 CENPEQ02224 2701 aa10.34□□□□□ -0.75
SIN3B-201ENST00000248054 A0A1B0GU69 56 aa10.33□□□□□ -0.76
SIN3B-201ENST00000248054 APLNQ9ULZ1 77 aa10.33□□□□□ -0.76
SIN3B-201ENST00000248054 LOC101927531A0A1B0GV80 90 aa10.32□□□□□ -0.76
SIN3B-201ENST00000248054 ST20-AS1Q8NBB2 130 aa10.32□□□□□ -0.76
SIN3B-201ENST00000248054 DMXL2Q8TDJ6 3036 aa10.31□□□□□ -0.76
SIN3B-201ENST00000248054 PRR15Q8IV56 129 aa10.31□□□□□ -0.76
SIN3B-201ENST00000248054 C8orf87E5RJ46 101 aa10.3□□□□□ -0.76
SIN3B-201ENST00000248054 CNBPP62633 177 aaKnown RBP10.3□□□□□ -0.76
SIN3B-201ENST00000248054 FAM229BQ4G0N7 80 aa10.3□□□□□ -0.76
SIN3B-201ENST00000248054 C9orf163Q8N9P6 203 aa10.29□□□□□ -0.76
SIN3B-201ENST00000248054 CYP4F30PQ9H0H9 118 aa10.29□□□□□ -0.76
SIN3B-201ENST00000248054 FAM168BA1KXE4 195 aa10.29□□□□□ -0.76
SIN3B-201ENST00000248054 CFAP47Q6ZTR5 3102 aa10.29□□□□□ -0.76
SIN3B-201ENST00000248054 RETNLBQ9BQ08 111 aa10.29□□□□□ -0.76
SIN3B-201ENST00000248054 ASPMQ8IZT6 3477 aa10.28□□□□□ -0.76
SIN3B-201ENST00000248054 CHTF8P0CG12 524 aa10.27□□□□□ -0.76
SIN3B-201ENST00000248054 C7orf65Q6ZTY9 151 aa10.27□□□□□ -0.76
SIN3B-201ENST00000248054 IGKV2D-30A0A075B6S6 120 aa10.27□□□□□ -0.77
SIN3B-201ENST00000248054 IGKV2-30P06310 120 aa10.27□□□□□ -0.77
SIN3B-201ENST00000248054 ATRQ13535 2644 aa10.27□□□□□ -0.77
SIN3B-201ENST00000248054 SPINK1P00995 79 aa10.26□□□□□ -0.77
SIN3B-201ENST00000248054 IGLV5-37A0A075B6J1 123 aa10.26□□□□□ -0.77
SIN3B-201ENST00000248054 K7EQZ3 153 aa10.25□□□□□ -0.77
SIN3B-201ENST00000248054 LINC00313P59037 77 aa10.24□□□□□ -0.77
SIN3B-201ENST00000248054 A0A087WTM6 91 aa10.23□□□□□ -0.77
SIN3B-201ENST00000248054 FAM229AH3BQW9 127 aa10.23□□□□□ -0.77
SIN3B-201ENST00000248054 RPL37AP61513 92 aaKnown RBP10.23□□□□□ -0.77
SIN3B-201ENST00000248054 SPAG11AQ6PDA7 123 aa10.22□□□□□ -0.77
SIN3B-201ENST00000248054 MRPL34Q9BQ48 92 aaKnown RBP10.22□□□□□ -0.77
SIN3B-201ENST00000248054 ATMQ13315 3056 aa10.21□□□□□ -0.77
SIN3B-201ENST00000248054 LAMA5O15230 3695 aa10.21□□□□□ -0.78
SIN3B-201ENST00000248054 UNC79Q9P2D8 2635 aa10.2□□□□□ -0.78
SIN3B-201ENST00000248054 ADGRG4Q8IZF6 3080 aa10.2□□□□□ -0.78
SIN3B-201ENST00000248054 KTN1-AS1Q86SY8 53 aa10.19□□□□□ -0.78
SIN3B-201ENST00000248054 Q8N377 158 aa10.19□□□□□ -0.78
SIN3B-201ENST00000248054 IGFL1Q6UW32 110 aa10.19□□□□□ -0.78
SIN3B-201ENST00000248054 SPACA4Q8TDM5 124 aa10.18□□□□□ -0.78
SIN3B-201ENST00000248054 Q1T7F1 81 aa10.16□□□□□ -0.78
SIN3B-201ENST00000248054 OCR1Q9BZK8 76 aa10.16□□□□□ -0.78
SIN3B-201ENST00000248054 CASC10Q5T4H9 136 aa10.16□□□□□ -0.78
SIN3B-201ENST00000248054 COA5Q86WW8 74 aa10.16□□□□□ -0.78
SIN3B-201ENST00000248054 ZFHX4Q86UP3 3567 aa10.13□□□□□ -0.79
SIN3B-201ENST00000248054 ZNF861PO60384 105 aa10.13□□□□□ -0.79
SIN3B-201ENST00000248054 MAST4O15021 2626 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms