RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 ANK2Q01484 3957 aa14.21□□□□□ -0.13
SH2D3A-201ENST00000245908 TRBV7-4A0A0J9YYF1 115 aa14.21□□□□□ -0.13
SH2D3A-201ENST00000245908 SYCNQ0VAF6 134 aa14.21□□□□□ -0.13
SH2D3A-201ENST00000245908 PKD1L1Q8TDX9 2849 aa14.21□□□□□ -0.13
SH2D3A-201ENST00000245908 DNAH10OSP0CZ25 163 aa14.2□□□□□ -0.14
SH2D3A-201ENST00000245908 LINC01547P58512 204 aaPredicted RBP14.2□□□□□ -0.14
SH2D3A-201ENST00000245908 TENM3Q9P273 2699 aa14.2□□□□□ -0.14
SH2D3A-201ENST00000245908 Q6ZVQ6 151 aa14.19□□□□□ -0.14
SH2D3A-201ENST00000245908 DNAH3Q8TD57 4116 aa14.17□□□□□ -0.14
SH2D3A-201ENST00000245908 SMIM26A0A096LP01 95 aa14.17□□□□□ -0.14
SH2D3A-201ENST00000245908 CXCL6P80162 114 aa14.16□□□□□ -0.14
SH2D3A-201ENST00000245908 LINC00336Q6ZUF6 198 aa14.16□□□□□ -0.14
SH2D3A-201ENST00000245908 F8P00451 2351 aa14.15□□□□□ -0.14
SH2D3A-201ENST00000245908 TRAV10A0A0B4J240 114 aa14.14□□□□□ -0.15
SH2D3A-201ENST00000245908 NDUFC1O43677 76 aa14.13□□□□□ -0.15
SH2D3A-201ENST00000245908 HAMPP81172 84 aa14.12□□□□□ -0.15
SH2D3A-201ENST00000245908 KCNQ1DNQ9H478 68 aa14.12□□□□□ -0.15
SH2D3A-201ENST00000245908 TLX1NBP0CAT3 122 aa14.12□□□□□ -0.15
SH2D3A-201ENST00000245908 NKAPP1Q8N9T2 125 aa14.12□□□□□ -0.15
SH2D3A-201ENST00000245908 RMI2Q96E14 147 aa14.12□□□□□ -0.15
SH2D3A-201ENST00000245908 F8WEM9 126 aa14.11□□□□□ -0.15
SH2D3A-201ENST00000245908 ATP5EP56381 51 aaPredicted RBP14.11□□□□□ -0.15
SH2D3A-201ENST00000245908 SERTAD4-AS1Q5TG53 156 aa14.11□□□□□ -0.15
SH2D3A-201ENST00000245908 SNURFQ9Y675 71 aa14.11□□□□□ -0.15
SH2D3A-201ENST00000245908 FP248Q71RG6 208 aaPredicted RBP14.1□□□□□ -0.15
SH2D3A-201ENST00000245908 C7orf33Q8WU49 177 aa14.1□□□□□ -0.15
SH2D3A-201ENST00000245908 LINC00588Q9Y4M8 146 aa14.09□□□□□ -0.15
SH2D3A-201ENST00000245908 PLA2G2DQ9UNK4 145 aa14.08□□□□□ -0.15
SH2D3A-201ENST00000245908 FBN1P35555 2871 aaKnown RBP14.07□□□□□ -0.16
SH2D3A-201ENST00000245908 STAB1Q9NY15 2570 aa14.05□□□□□ -0.16
SH2D3A-201ENST00000245908 IGLV5-37A0A075B6J1 123 aa14.02□□□□□ -0.16
SH2D3A-201ENST00000245908 CASC10Q5T4H9 136 aa14.02□□□□□ -0.16
SH2D3A-201ENST00000245908 TM2D3Q9BRN9 247 aa14.01□□□□□ -0.17
SH2D3A-201ENST00000245908 PRYO14603 147 aa13.99□□□□□ -0.17
SH2D3A-201ENST00000245908 ERC2-IT1O76042 136 aa13.99□□□□□ -0.17
SH2D3A-201ENST00000245908 Q8N377 158 aa13.98□□□□□ -0.17
SH2D3A-201ENST00000245908 MAST4O15021 2626 aa13.98□□□□□ -0.17
SH2D3A-201ENST00000245908 KRTAP4-16G5E9R7 235 aaPredicted RBP13.98□□□□□ -0.17
SH2D3A-201ENST00000245908 DHRS4-AS1Q9P1J3 65 aa13.98□□□□□ -0.17
SH2D3A-201ENST00000245908 IGLV1-50A0A075B6I6 118 aa13.97□□□□□ -0.17
SH2D3A-201ENST00000245908 FAM168BA1KXE4 195 aa13.97□□□□□ -0.17
SH2D3A-201ENST00000245908 Q6ZRX8 168 aa13.97□□□□□ -0.17
SH2D3A-201ENST00000245908 FLNBO75369 2602 aaKnown RBP13.97□□□□□ -0.17
SH2D3A-201ENST00000245908 PRB2P02812 416 aaPredicted RBP13.97□□□□□ -0.17
SH2D3A-201ENST00000245908 SCXQ7RTU7 201 aa13.97□□□□□ -0.17
SH2D3A-201ENST00000245908 SPRR1AP35321 89 aa13.96□□□□□ -0.17
SH2D3A-201ENST00000245908 NREPQ16612 68 aa13.96□□□□□ -0.17
SH2D3A-201ENST00000245908 DNAH1Q9P2D7 4330 aa13.96□□□□□ -0.18
SH2D3A-201ENST00000245908 RPL37AP8A6NKH3 93 aa13.95□□□□□ -0.18
SH2D3A-201ENST00000245908 DEFB105AQ8NG35 78 aa13.95□□□□□ -0.18
SH2D3A-201ENST00000245908 LINC00474Q9P2X8 69 aa13.95□□□□□ -0.18
SH2D3A-201ENST00000245908 IGLV5-48A0A075B6I7 105 aa13.94□□□□□ -0.18
SH2D3A-201ENST00000245908 KRTAP7-1Q8IUC3 87 aa13.94□□□□□ -0.18
SH2D3A-201ENST00000245908 TMEM254Q8TBM7 123 aa13.93□□□□□ -0.18
SH2D3A-201ENST00000245908 Q9BRP9 147 aa13.93□□□□□ -0.18
SH2D3A-201ENST00000245908 K7EIL1 84 aa13.92□□□□□ -0.18
SH2D3A-201ENST00000245908 ETDCA0A1B0GVM5 59 aa13.91□□□□□ -0.18
SH2D3A-201ENST00000245908 BPY2O14599 106 aa13.91□□□□□ -0.18
SH2D3A-201ENST00000245908 NOTCH1P46531 2555 aa13.89□□□□□ -0.19
SH2D3A-201ENST00000245908 MRPL55Q7Z7F7 128 aaKnown RBP13.88□□□□□ -0.19
SH2D3A-201ENST00000245908 BAHCC1Q9P281 2608 aa13.87□□□□□ -0.19
SH2D3A-201ENST00000245908 PKIGQ9Y2B9 76 aa13.87□□□□□ -0.19
SH2D3A-201ENST00000245908 HUWE1Q7Z6Z7 4374 aaKnown RBP13.86□□□□□ -0.19
SH2D3A-201ENST00000245908 TNP2Q05952 138 aa13.86□□□□□ -0.19
SH2D3A-201ENST00000245908 C3orf84H3BNL1 204 aa13.85□□□□□ -0.19
SH2D3A-201ENST00000245908 IGKV4-1P06312 121 aa13.84□□□□□ -0.19
SH2D3A-201ENST00000245908 A0A1B0GW54 56 aa13.84□□□□□ -0.19
SH2D3A-201ENST00000245908 BRK1Q8WUW1 75 aa13.84□□□□□ -0.19
SH2D3A-201ENST00000245908 A0A0U1RQV1 116 aa13.83□□□□□ -0.2
SH2D3A-201ENST00000245908 ST20-AS1Q8NBB2 130 aa13.83□□□□□ -0.2
SH2D3A-201ENST00000245908 OCR1Q9BZK8 76 aa13.81□□□□□ -0.2
SH2D3A-201ENST00000245908 FUSP35637 526 aaKnown RBP eCLIP13.81□□□□□ -0.2
SH2D3A-201ENST00000245908 FAM229BQ4G0N7 80 aa13.81□□□□□ -0.2
SH2D3A-201ENST00000245908 Q8N9L7 120 aa13.81□□□□□ -0.2
SH2D3A-201ENST00000245908 A0A1W2PNM2 257 aa13.8□□□□□ -0.2
SH2D3A-201ENST00000245908 C1orf137Q5JT78 98 aa13.79□□□□□ -0.2
SH2D3A-201ENST00000245908 REG3GQ6UW15 175 aa13.78□□□□□ -0.2
SH2D3A-201ENST00000245908 UBE2BP63146 152 aa13.78□□□□□ -0.2
SH2D3A-201ENST00000245908 NBEAL1Q6ZS30 2694 aa13.77□□□□□ -0.2
SH2D3A-201ENST00000245908 Q8NBF4 154 aa13.76□□□□□ -0.21
SH2D3A-201ENST00000245908 KRTAP1-5Q9BYS1 174 aa13.76□□□□□ -0.21
SH2D3A-201ENST00000245908 C1orf195Q5TG92 126 aa13.75□□□□□ -0.21
SH2D3A-201ENST00000245908 MPLKIPQ8TAP9 179 aa13.74□□□□□ -0.21
SH2D3A-201ENST00000245908 SPRR4Q96PI1 79 aa13.74□□□□□ -0.21
SH2D3A-201ENST00000245908 CNBPP62633 177 aaKnown RBP13.73□□□□□ -0.21
SH2D3A-201ENST00000245908 A0A096LNI7 61 aa13.72□□□□□ -0.21
SH2D3A-201ENST00000245908 COL6A5A8TX70 2615 aa13.72□□□□□ -0.21
SH2D3A-201ENST00000245908 C16orf90A8MZG2 172 aa13.71□□□□□ -0.21
SH2D3A-201ENST00000245908 SMIM29Q86T20 159 aa13.7□□□□□ -0.22
SH2D3A-201ENST00000245908 V9GYY9 64 aa13.67□□□□□ -0.22
SH2D3A-201ENST00000245908 HIGD2AQ9BW72 106 aa13.67□□□□□ -0.22
SH2D3A-201ENST00000245908 IGKV2-24A0A0C4DH68 120 aa13.66□□□□□ -0.22
SH2D3A-201ENST00000245908 A0A1W2PNN7 141 aa13.66□□□□□ -0.22
SH2D3A-201ENST00000245908 PSCAO43653 123 aa13.66□□□□□ -0.22
SH2D3A-201ENST00000245908 LINC00476Q8WZB0 136 aa13.64□□□□□ -0.23
SH2D3A-201ENST00000245908 APLNQ9ULZ1 77 aa13.64□□□□□ -0.23
SH2D3A-201ENST00000245908 UBE2DNLQ8IWF7 75 aa13.64□□□□□ -0.23
SH2D3A-201ENST00000245908 DNAH10Q8IVF4 4471 aa13.63□□□□□ -0.23
SH2D3A-201ENST00000245908 LCE6AA0A183 80 aa13.62□□□□□ -0.23
SH2D3A-201ENST00000245908 hDV103S1A0JD37 113 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms