RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 A0A087WTM6 91 aa7.55□□□□□ -1.2
LAMA4-201ENST00000230538 PLA2G2DQ9UNK4 145 aa7.55□□□□□ -1.2
LAMA4-201ENST00000230538 ZFYVE26Q68DK2 2539 aa7.54□□□□□ -1.2
LAMA4-201ENST00000230538 TLX1NBP0CAT3 122 aa7.54□□□□□ -1.2
LAMA4-201ENST00000230538 KLKP1Q107X0 134 aa7.53□□□□□ -1.2
LAMA4-201ENST00000230538 GIG44P09565 113 aaPredicted RBP7.53□□□□□ -1.2
LAMA4-201ENST00000230538 ANAPC11Q9NYG5 84 aa7.53□□□□□ -1.2
LAMA4-201ENST00000230538 SMR3BP02814 79 aaPredicted RBP7.51□□□□□ -1.21
LAMA4-201ENST00000230538 TLN2Q9Y4G6 2542 aa7.51□□□□□ -1.21
LAMA4-201ENST00000230538 LINC00612Q8N6U2 182 aa7.51□□□□□ -1.21
LAMA4-201ENST00000230538 USP9XQ93008 2570 aaPredicted RBP7.51□□□□□ -1.21
LAMA4-201ENST00000230538 C9orf163Q8N9P6 203 aa7.51□□□□□ -1.21
LAMA4-201ENST00000230538 IGLV7-43P04211 117 aa7.5□□□□□ -1.21
LAMA4-201ENST00000230538 IGLV5-37A0A075B6J1 123 aa7.49□□□□□ -1.21
LAMA4-201ENST00000230538 A0A096LNT2 108 aa7.48□□□□□ -1.21
LAMA4-201ENST00000230538 PSORS1C2Q9UIG4 136 aa7.47□□□□□ -1.21
LAMA4-201ENST00000230538 RBM12B-AS1Q9P1G2 102 aa7.47□□□□□ -1.21
LAMA4-201ENST00000230538 H7BZZ5 65 aa7.47□□□□□ -1.21
LAMA4-201ENST00000230538 SPRR4Q96PI1 79 aa7.46□□□□□ -1.21
LAMA4-201ENST00000230538 LINC00336Q6ZUF6 198 aa7.46□□□□□ -1.22
LAMA4-201ENST00000230538 CD164Q04900 197 aa7.45□□□□□ -1.22
LAMA4-201ENST00000230538 CASC10Q5T4H9 136 aa7.45□□□□□ -1.22
LAMA4-201ENST00000230538 ANKRD11Q6UB99 2663 aaPredicted RBP7.43□□□□□ -1.22
LAMA4-201ENST00000230538 CNBPP62633 177 aaKnown RBP7.43□□□□□ -1.22
LAMA4-201ENST00000230538 A0A1W2PNM2 257 aa7.43□□□□□ -1.22
LAMA4-201ENST00000230538 GOLGB1Q14789 3259 aaKnown RBP7.43□□□□□ -1.22
LAMA4-201ENST00000230538 FAM104AQ969W3 186 aa7.42□□□□□ -1.22
LAMA4-201ENST00000230538 LINC01554Q52M75 96 aa7.42□□□□□ -1.22
LAMA4-201ENST00000230538 ANKRD17O75179 2603 aaKnown RBP7.42□□□□□ -1.22
LAMA4-201ENST00000230538 A0A0D9SG42 100 aa7.42□□□□□ -1.22
LAMA4-201ENST00000230538 KTN1-AS1Q86SY8 53 aa7.42□□□□□ -1.22
LAMA4-201ENST00000230538 Q8N1X5 172 aa7.42□□□□□ -1.22
LAMA4-201ENST00000230538 ZNF575Q86XF7 245 aa7.42□□□□□ -1.22
LAMA4-201ENST00000230538 SETD2Q9BYW2 2564 aaPredicted RBP7.41□□□□□ -1.22
LAMA4-201ENST00000230538 IGLV5-48A0A075B6I7 105 aa7.41□□□□□ -1.22
LAMA4-201ENST00000230538 CDC42SE1Q9NRR8 79 aa7.4□□□□□ -1.22
LAMA4-201ENST00000230538 SPANXA2-OT1Q8N9U9 137 aa7.4□□□□□ -1.22
LAMA4-201ENST00000230538 ZNF462Q96JM2 2506 aa7.39□□□□□ -1.23
LAMA4-201ENST00000230538 PKD1L2Q7Z442 2459 aa7.39□□□□□ -1.23
LAMA4-201ENST00000230538 LCA10Q71F78 164 aa7.38□□□□□ -1.23
LAMA4-201ENST00000230538 USP9YO00507 2555 aaPredicted RBP7.37□□□□□ -1.23
LAMA4-201ENST00000230538 CEP295Q9C0D2 2601 aa7.34□□□□□ -1.23
LAMA4-201ENST00000230538 KRTAP1-3Q8IUG1 177 aa7.33□□□□□ -1.24
LAMA4-201ENST00000230538 CENPFP49454 3210 aa7.32□□□□□ -1.24
LAMA4-201ENST00000230538 MTORP42345 2549 aa7.29□□□□□ -1.24
LAMA4-201ENST00000230538 F8P00451 2351 aa7.28□□□□□ -1.24
LAMA4-201ENST00000230538 Q6ZSA8 131 aa7.28□□□□□ -1.24
LAMA4-201ENST00000230538 OCR1Q9BZK8 76 aa7.27□□□□□ -1.25
LAMA4-201ENST00000230538 TNP2Q05952 138 aa7.27□□□□□ -1.25
LAMA4-201ENST00000230538 KRTAP1-1Q07627 177 aa7.27□□□□□ -1.25
LAMA4-201ENST00000230538 PRR26Q8N8Z3 221 aa7.27□□□□□ -1.25
LAMA4-201ENST00000230538 SPTBN4Q9H254 2564 aa7.26□□□□□ -1.25
LAMA4-201ENST00000230538 POLQO75417 2590 aa7.26□□□□□ -1.25
LAMA4-201ENST00000230538 Q1T7F1 81 aa7.24□□□□□ -1.25
LAMA4-201ENST00000230538 CHD8Q9HCK8 2581 aa7.24□□□□□ -1.25
LAMA4-201ENST00000230538 ACANP16112 2415 aa7.24□□□□□ -1.25
LAMA4-201ENST00000230538 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.23□□□□□ -1.25
LAMA4-201ENST00000230538 LUZP6Q538Z0 58 aa7.23□□□□□ -1.25
LAMA4-201ENST00000230538 IGLV7-46A0A075B6I9 117 aa7.23□□□□□ -1.25
LAMA4-201ENST00000230538 HRES1P13985 223 aa7.21□□□□□ -1.25
LAMA4-201ENST00000230538 A0A1B0GU33 70 aa7.21□□□□□ -1.26
LAMA4-201ENST00000230538 CAMK2N1Q7Z7J9 78 aa7.2□□□□□ -1.26
LAMA4-201ENST00000230538 DNAH12Q6ZR08 3092 aa7.19□□□□□ -1.26
LAMA4-201ENST00000230538 CR1P17927 2039 aa7.17□□□□□ -1.26
LAMA4-201ENST00000230538 FAM229BQ4G0N7 80 aa7.17□□□□□ -1.26
LAMA4-201ENST00000230538 LINC00483Q53H64 154 aa7.16□□□□□ -1.26
LAMA4-201ENST00000230538 Q75L30 129 aa7.15□□□□□ -1.26
LAMA4-201ENST00000230538 M0R2T5 61 aa7.15□□□□□ -1.26
LAMA4-201ENST00000230538 Q8NDZ9 215 aa7.14□□□□□ -1.27
LAMA4-201ENST00000230538 ZCCHC13Q8WW36 166 aaKnown RBP7.14□□□□□ -1.27
LAMA4-201ENST00000230538 MMP24-AS1A0A0U1RRL7 71 aa7.14□□□□□ -1.27
LAMA4-201ENST00000230538 H3BS24 57 aa7.12□□□□□ -1.27
LAMA4-201ENST00000230538 S4R3F8 94 aa7.12□□□□□ -1.27
LAMA4-201ENST00000230538 PLAC8Q9NZF1 115 aa7.12□□□□□ -1.27
LAMA4-201ENST00000230538 WIPF1O43516 503 aa7.12□□□□□ -1.27
LAMA4-201ENST00000230538 FASNP49327 2511 aaKnown RBP7.11□□□□□ -1.27
LAMA4-201ENST00000230538 Q8N9P0 234 aaPredicted RBP7.1□□□□□ -1.27
LAMA4-201ENST00000230538 CYSTM1Q9H1C7 97 aa7.09□□□□□ -1.27
LAMA4-201ENST00000230538 LINC01558Q9Y6Z2 57 aa7.09□□□□□ -1.27
LAMA4-201ENST00000230538 DMAC1Q96GE9 116 aa7.09□□□□□ -1.28
LAMA4-201ENST00000230538 CSAG1Q6PB30 78 aa7.08□□□□□ -1.28
LAMA4-201ENST00000230538 Q5XG85 94 aa7.08□□□□□ -1.28
LAMA4-201ENST00000230538 SPRR1AP35321 89 aa7.07□□□□□ -1.28
LAMA4-201ENST00000230538 PRAC1Q96KF2 57 aa7.06□□□□□ -1.28
LAMA4-201ENST00000230538 Q5W150 140 aa7.06□□□□□ -1.28
LAMA4-201ENST00000230538 BPTFQ12830 3046 aa7.04□□□□□ -1.28
LAMA4-201ENST00000230538 UTRNP46939 3433 aa7.03□□□□□ -1.28
LAMA4-201ENST00000230538 LINC00472Q9H8W2 130 aa7.02□□□□□ -1.29
LAMA4-201ENST00000230538 FP248Q71RG6 208 aaPredicted RBP7.01□□□□□ -1.29
LAMA4-201ENST00000230538 SPRR1BP22528 89 aa7□□□□□ -1.29
LAMA4-201ENST00000230538 SPINK7P58062 85 aa7□□□□□ -1.29
LAMA4-201ENST00000230538 Q5VV11 94 aa6.98□□□□□ -1.29
LAMA4-201ENST00000230538 R4GN34 69 aa6.98□□□□□ -1.29
LAMA4-201ENST00000230538 C5orf42Q9H799 3197 aa6.98□□□□□ -1.29
LAMA4-201ENST00000230538 SEC61BP60468 96 aaKnown RBP6.94□□□□□ -1.3
LAMA4-201ENST00000230538 KRTAP1-5Q9BYS1 174 aa6.93□□□□□ -1.3
LAMA4-201ENST00000230538 Q5VSD8 79 aa6.93□□□□□ -1.3
LAMA4-201ENST00000230538 KRTAP26-1Q6PEX3 210 aa6.93□□□□□ -1.3
LAMA4-201ENST00000230538 USP24Q9UPU5 2620 aa6.92□□□□□ -1.3
LAMA4-201ENST00000230538 A0A0A0MQY5 61 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms