RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 A4D1N5 150 aa11.99□□□□□ -0.49
HOXA6-201ENST00000222728 H0Y9J4 135 aa11.99□□□□□ -0.49
HOXA6-201ENST00000222728 SPRR1AP35321 89 aa11.98□□□□□ -0.49
HOXA6-201ENST00000222728 ETDCA0A1B0GVM5 59 aa11.97□□□□□ -0.49
HOXA6-201ENST00000222728 SMIM6P0DI80 62 aa11.97□□□□□ -0.49
HOXA6-201ENST00000222728 A6NDN8 102 aa11.96□□□□□ -0.49
HOXA6-201ENST00000222728 KRTAP4-16G5E9R7 235 aaPredicted RBP11.96□□□□□ -0.49
HOXA6-201ENST00000222728 C12orf57Q99622 126 aa11.96□□□□□ -0.49
HOXA6-201ENST00000222728 PRO1933Q9H354 126 aa11.94□□□□□ -0.5
HOXA6-201ENST00000222728 UQCR10Q9UDW1 63 aa11.94□□□□□ -0.5
HOXA6-201ENST00000222728 ZNF73O43830 326 aaPredicted RBP11.93□□□□□ -0.5
HOXA6-201ENST00000222728 DMBT1Q9UGM3 2413 aaPredicted RBP11.93□□□□□ -0.5
HOXA6-201ENST00000222728 B5MCH6 92 aa11.92□□□□□ -0.5
HOXA6-201ENST00000222728 HIGD2AQ9BW72 106 aa11.92□□□□□ -0.5
HOXA6-201ENST00000222728 TRAV13-2A0A0B4J235 113 aa11.91□□□□□ -0.5
HOXA6-201ENST00000222728 KRTAP29-1A8MX34 341 aaPredicted RBP11.91□□□□□ -0.5
HOXA6-201ENST00000222728 OXTP01178 125 aa11.9□□□□□ -0.5
HOXA6-201ENST00000222728 TAL2Q16559 108 aa11.9□□□□□ -0.5
HOXA6-201ENST00000222728 CBY1Q9Y3M2 126 aa11.9□□□□□ -0.5
HOXA6-201ENST00000222728 CEND1Q8N111 149 aa11.89□□□□□ -0.51
HOXA6-201ENST00000222728 KRTAP1-4P0C5Y4 121 aa11.88□□□□□ -0.51
HOXA6-201ENST00000222728 Q6ZRX8 168 aa11.88□□□□□ -0.51
HOXA6-201ENST00000222728 J3QL48 77 aa11.87□□□□□ -0.51
HOXA6-201ENST00000222728 C6orf99Q4VX62 202 aa11.87□□□□□ -0.51
HOXA6-201ENST00000222728 SMCR5Q8TEV8 140 aa11.87□□□□□ -0.51
HOXA6-201ENST00000222728 LINC01600Q96MT4 127 aa11.87□□□□□ -0.51
HOXA6-201ENST00000222728 RPL13AP40429 203 aaKnown RBP11.86□□□□□ -0.51
HOXA6-201ENST00000222728 FXYD2P54710 66 aa11.86□□□□□ -0.51
HOXA6-201ENST00000222728 HSD52Q0P140 79 aa11.86□□□□□ -0.51
HOXA6-201ENST00000222728 SMIM11BQ8TCY0 68 aa11.86□□□□□ -0.51
HOXA6-201ENST00000222728 Q9BRP9 147 aa11.86□□□□□ -0.51
HOXA6-201ENST00000222728 TNXBP22105 4242 aa11.86□□□□□ -0.51
HOXA6-201ENST00000222728 CFC1BP0CG36 223 aa11.85□□□□□ -0.51
HOXA6-201ENST00000222728 CFC1P0CG37 223 aa11.85□□□□□ -0.51
HOXA6-201ENST00000222728 HINT1P49773 126 aaPredicted RBP11.84□□□□□ -0.51
HOXA6-201ENST00000222728 ANAPC11Q9NYG5 84 aa11.84□□□□□ -0.51
HOXA6-201ENST00000222728 ERC2-IT1O76042 136 aa11.83□□□□□ -0.52
HOXA6-201ENST00000222728 MT1HL1P0DM35 61 aa11.83□□□□□ -0.52
HOXA6-201ENST00000222728 COX7BP24311 80 aa11.82□□□□□ -0.52
HOXA6-201ENST00000222728 PRR26Q8N8Z3 221 aa11.82□□□□□ -0.52
HOXA6-201ENST00000222728 RAB37Q96AX2 223 aa11.82□□□□□ -0.52
HOXA6-201ENST00000222728 H7C2G1 150 aa11.81□□□□□ -0.52
HOXA6-201ENST00000222728 TMEM238LA0A1B0GVL6 79 aa11.8□□□□□ -0.52
HOXA6-201ENST00000222728 A6NJY4 79 aa11.8□□□□□ -0.52
HOXA6-201ENST00000222728 ELOF1P60002 83 aaKnown RBP11.8□□□□□ -0.52
HOXA6-201ENST00000222728 A0A0B4J2C4 111 aa11.79□□□□□ -0.52
HOXA6-201ENST00000222728 SPRR4Q96PI1 79 aa11.78□□□□□ -0.52
HOXA6-201ENST00000222728 A0A087X002 238 aa11.77□□□□□ -0.53
HOXA6-201ENST00000222728 KRTAP10-8P60410 259 aa11.77□□□□□ -0.53
HOXA6-201ENST00000222728 NHP2Q9NX24 153 aaKnown RBP11.77□□□□□ -0.53
HOXA6-201ENST00000222728 TRBV7-6A0A0J9YX20 115 aa11.76□□□□□ -0.53
HOXA6-201ENST00000222728 A0A1B0GWB2 263 aa11.76□□□□□ -0.53
HOXA6-201ENST00000222728 K7ERJ3 54 aa11.75□□□□□ -0.53
HOXA6-201ENST00000222728 CTAG1AP78358 180 aa11.75□□□□□ -0.53
HOXA6-201ENST00000222728 DHRS4-AS1Q9P1J3 65 aa11.75□□□□□ -0.53
HOXA6-201ENST00000222728 ZNF706Q9Y5V0 76 aaPredicted RBP11.75□□□□□ -0.53
HOXA6-201ENST00000222728 TSTD3H0UI37 97 aa11.74□□□□□ -0.53
HOXA6-201ENST00000222728 BVES-AS1Q5T3Y7 98 aa11.74□□□□□ -0.53
HOXA6-201ENST00000222728 ST20-AS1Q8NBB2 130 aa11.74□□□□□ -0.53
HOXA6-201ENST00000222728 PRO1854Q9UHT4 67 aa11.74□□□□□ -0.53
HOXA6-201ENST00000222728 GAGE2AQ6NT46 116 aa11.73□□□□□ -0.53
HOXA6-201ENST00000222728 CRYGAP11844 174 aa11.72□□□□□ -0.53
HOXA6-201ENST00000222728 Q1RN00 199 aa11.72□□□□□ -0.53
HOXA6-201ENST00000222728 FAM229BQ4G0N7 80 aa11.71□□□□□ -0.53
HOXA6-201ENST00000222728 VAMP3Q15836 100 aa11.7□□□□□ -0.54
HOXA6-201ENST00000222728 KRTAP13-2Q52LG2 175 aa11.7□□□□□ -0.54
HOXA6-201ENST00000222728 C3orf22Q8N5N4 141 aa11.68□□□□□ -0.54
HOXA6-201ENST00000222728 LINC00483Q53H64 154 aa11.67□□□□□ -0.54
HOXA6-201ENST00000222728 TYMSOSQ8TAI1 123 aa11.66□□□□□ -0.54
HOXA6-201ENST00000222728 LINC00575Q6W349 94 aa11.65□□□□□ -0.54
HOXA6-201ENST00000222728 DEFB105AQ8NG35 78 aa11.65□□□□□ -0.54
HOXA6-201ENST00000222728 HERC1Q15751 4861 aa11.64□□□□□ -0.55
HOXA6-201ENST00000222728 M0R143 59 aa11.64□□□□□ -0.55
HOXA6-201ENST00000222728 SLC25A20O43772 301 aa11.64□□□□□ -0.55
HOXA6-201ENST00000222728 TRIAP1O43715 76 aa11.62□□□□□ -0.55
HOXA6-201ENST00000222728 TSPAN13O95857 204 aa11.62□□□□□ -0.55
HOXA6-201ENST00000222728 IGLV9-49A0A0B4J1Y8 123 aa11.61□□□□□ -0.55
HOXA6-201ENST00000222728 hADV29S1A0JD25 119 aa11.61□□□□□ -0.55
HOXA6-201ENST00000222728 PSMB2P49721 201 aa11.59□□□□□ -0.55
HOXA6-201ENST00000222728 LINC01547P58512 204 aaPredicted RBP11.59□□□□□ -0.55
HOXA6-201ENST00000222728 FAM218AQ96MZ4 157 aa11.59□□□□□ -0.55
HOXA6-201ENST00000222728 SPRR1BP22528 89 aa11.58□□□□□ -0.56
HOXA6-201ENST00000222728 BATFQ16520 125 aa11.58□□□□□ -0.56
HOXA6-201ENST00000222728 H0YGX0 51 aa11.57□□□□□ -0.56
HOXA6-201ENST00000222728 MOBPQ13875 183 aa11.57□□□□□ -0.56
HOXA6-201ENST00000222728 Q6ZQY7 126 aa11.57□□□□□ -0.56
HOXA6-201ENST00000222728 TEX49A0A1B0GTD5 131 aa11.56□□□□□ -0.56
HOXA6-201ENST00000222728 IGLV5-48A0A075B6I7 105 aa11.55□□□□□ -0.56
HOXA6-201ENST00000222728 CLEC2BQ92478 149 aa11.55□□□□□ -0.56
HOXA6-201ENST00000222728 C9orf153Q5TBE3 101 aa11.54□□□□□ -0.56
HOXA6-201ENST00000222728 Q8N377 158 aa11.54□□□□□ -0.56
HOXA6-201ENST00000222728 LINC00304Q8N9R0 145 aa11.53□□□□□ -0.56
HOXA6-201ENST00000222728 Q8NBF4 154 aa11.53□□□□□ -0.56
HOXA6-201ENST00000222728 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.52□□□□□ -0.57
HOXA6-201ENST00000222728 LAMTOR3Q9UHA4 124 aa11.52□□□□□ -0.57
HOXA6-201ENST00000222728 SMIM29Q86T20 159 aa11.51□□□□□ -0.57
HOXA6-201ENST00000222728 NAA38Q9BRA0 125 aaKnown RBP11.51□□□□□ -0.57
HOXA6-201ENST00000222728 COX6CP09669 75 aa11.5□□□□□ -0.57
HOXA6-201ENST00000222728 SNCGO76070 127 aa11.48□□□□□ -0.57
HOXA6-201ENST00000222728 SCGB1C2P0DMR2 95 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms