RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 C3orf84H3BNL1 204 aa12.14□□□□□ -0.47
CACTIN-201ENST00000221899 SERTAD4-AS1Q5TG53 156 aa12.12□□□□□ -0.47
CACTIN-201ENST00000221899 SYCNQ0VAF6 134 aa12.11□□□□□ -0.47
CACTIN-201ENST00000221899 NKAPP1Q8N9T2 125 aa12.11□□□□□ -0.47
CACTIN-201ENST00000221899 BPY2O14599 106 aa12.11□□□□□ -0.47
CACTIN-201ENST00000221899 NREPQ16612 68 aa12.1□□□□□ -0.47
CACTIN-201ENST00000221899 TENM3Q9P273 2699 aa12.1□□□□□ -0.47
CACTIN-201ENST00000221899 H3BNG1 76 aa12.09□□□□□ -0.47
CACTIN-201ENST00000221899 KRTAP10-11P60412 298 aa12.09□□□□□ -0.47
CACTIN-201ENST00000221899 C7orf33Q8WU49 177 aa12.09□□□□□ -0.47
CACTIN-201ENST00000221899 RPL37AP8A6NKH3 93 aa12.07□□□□□ -0.48
CACTIN-201ENST00000221899 IGKV4-1P06312 121 aa12.07□□□□□ -0.48
CACTIN-201ENST00000221899 SERP1Q9Y6X1 66 aa12.07□□□□□ -0.48
CACTIN-201ENST00000221899 Q8N377 158 aa12.07□□□□□ -0.48
CACTIN-201ENST00000221899 WIPF1O43516 503 aa12.06□□□□□ -0.48
CACTIN-201ENST00000221899 KCNQ1DNQ9H478 68 aa12.05□□□□□ -0.48
CACTIN-201ENST00000221899 DEFB131BA0A096LNP1 70 aa12.04□□□□□ -0.48
CACTIN-201ENST00000221899 FAM168BA1KXE4 195 aa12.04□□□□□ -0.48
CACTIN-201ENST00000221899 LINC01556Q5JQF7 62 aa12.04□□□□□ -0.48
CACTIN-201ENST00000221899 TMEM254Q8TBM7 123 aa12.03□□□□□ -0.48
CACTIN-201ENST00000221899 EPM2AB3EWF7 344 aa12.01□□□□□ -0.49
CACTIN-201ENST00000221899 CASC10Q5T4H9 136 aa11.99□□□□□ -0.49
CACTIN-201ENST00000221899 ST20-AS1Q8NBB2 130 aa11.99□□□□□ -0.49
CACTIN-201ENST00000221899 C11orf45Q8TAV5 145 aa11.99□□□□□ -0.49
CACTIN-201ENST00000221899 Q9BRP9 147 aa11.99□□□□□ -0.49
CACTIN-201ENST00000221899 ANK2Q01484 3957 aa11.98□□□□□ -0.49
CACTIN-201ENST00000221899 KMT2BQ9UMN6 2715 aaPredicted RBP11.98□□□□□ -0.49
CACTIN-201ENST00000221899 Q6ZRX8 168 aa11.97□□□□□ -0.49
CACTIN-201ENST00000221899 IGLV5-48A0A075B6I7 105 aa11.96□□□□□ -0.49
CACTIN-201ENST00000221899 NDUFC1O43677 76 aa11.96□□□□□ -0.49
CACTIN-201ENST00000221899 OCR1Q9BZK8 76 aa11.96□□□□□ -0.49
CACTIN-201ENST00000221899 A0A1W2PNM2 257 aa11.96□□□□□ -0.5
CACTIN-201ENST00000221899 ETDCA0A1B0GVM5 59 aa11.95□□□□□ -0.5
CACTIN-201ENST00000221899 FUSP35637 526 aaKnown RBP eCLIP11.95□□□□□ -0.5
CACTIN-201ENST00000221899 F8WDY8 70 aa11.94□□□□□ -0.5
CACTIN-201ENST00000221899 DHRS4-AS1Q9P1J3 65 aa11.94□□□□□ -0.5
CACTIN-201ENST00000221899 C1orf137Q5JT78 98 aa11.93□□□□□ -0.5
CACTIN-201ENST00000221899 FP248Q71RG6 208 aaPredicted RBP11.93□□□□□ -0.5
CACTIN-201ENST00000221899 LINC00474Q9P2X8 69 aa11.93□□□□□ -0.5
CACTIN-201ENST00000221899 FLNBO75369 2602 aaKnown RBP11.93□□□□□ -0.5
CACTIN-201ENST00000221899 IGLV1-50A0A075B6I6 118 aa11.92□□□□□ -0.5
CACTIN-201ENST00000221899 DNAH10OSP0CZ25 163 aa11.92□□□□□ -0.5
CACTIN-201ENST00000221899 KRTAP7-1Q8IUC3 87 aa11.92□□□□□ -0.5
CACTIN-201ENST00000221899 HIGD2AQ9BW72 106 aa11.92□□□□□ -0.5
CACTIN-201ENST00000221899 KRTAP4-16G5E9R7 235 aaPredicted RBP11.92□□□□□ -0.5
CACTIN-201ENST00000221899 ERC2-IT1O76042 136 aa11.92□□□□□ -0.5
CACTIN-201ENST00000221899 SMIM29Q86T20 159 aa11.92□□□□□ -0.5
CACTIN-201ENST00000221899 FAM30AQ9NZY2 134 aa11.92□□□□□ -0.5
CACTIN-201ENST00000221899 PRYO14603 147 aa11.9□□□□□ -0.5
CACTIN-201ENST00000221899 A0A0U1RQV1 116 aa11.9□□□□□ -0.5
CACTIN-201ENST00000221899 MRAPQ8TCY5 172 aa11.9□□□□□ -0.5
CACTIN-201ENST00000221899 SMIM26A0A096LP01 95 aa11.89□□□□□ -0.51
CACTIN-201ENST00000221899 TLX1NBP0CAT3 122 aa11.89□□□□□ -0.51
CACTIN-201ENST00000221899 LINC00588Q9Y4M8 146 aa11.89□□□□□ -0.51
CACTIN-201ENST00000221899 UBE2BP63146 152 aa11.88□□□□□ -0.51
CACTIN-201ENST00000221899 F8P00451 2351 aa11.88□□□□□ -0.51
CACTIN-201ENST00000221899 TNP2Q05952 138 aa11.87□□□□□ -0.51
CACTIN-201ENST00000221899 STAB1Q9NY15 2570 aa11.87□□□□□ -0.51
CACTIN-201ENST00000221899 A0A0G2JQZ4 141 aa11.87□□□□□ -0.51
CACTIN-201ENST00000221899 A0A1W2PNN7 141 aa11.87□□□□□ -0.51
CACTIN-201ENST00000221899 PLA2G2DQ9UNK4 145 aa11.87□□□□□ -0.51
CACTIN-201ENST00000221899 BAHCC1Q9P281 2608 aa11.87□□□□□ -0.51
CACTIN-201ENST00000221899 SPRR1AP35321 89 aa11.86□□□□□ -0.51
CACTIN-201ENST00000221899 Q8NBF4 154 aa11.86□□□□□ -0.51
CACTIN-201ENST00000221899 MAST4O15021 2626 aa11.86□□□□□ -0.51
CACTIN-201ENST00000221899 ATP5EP56381 51 aaPredicted RBP11.85□□□□□ -0.51
CACTIN-201ENST00000221899 MRPL55Q7Z7F7 128 aaKnown RBP11.85□□□□□ -0.51
CACTIN-201ENST00000221899 FAM229BQ4G0N7 80 aa11.85□□□□□ -0.51
CACTIN-201ENST00000221899 LINC00336Q6ZUF6 198 aa11.85□□□□□ -0.51
CACTIN-201ENST00000221899 NOTCH1P46531 2555 aa11.84□□□□□ -0.51
CACTIN-201ENST00000221899 IGLV5-37A0A075B6J1 123 aa11.83□□□□□ -0.52
CACTIN-201ENST00000221899 PRB2P02812 416 aaPredicted RBP11.83□□□□□ -0.52
CACTIN-201ENST00000221899 K7EQZ3 153 aa11.82□□□□□ -0.52
CACTIN-201ENST00000221899 DSCR10P59022 87 aa11.81□□□□□ -0.52
CACTIN-201ENST00000221899 MPLKIPQ8TAP9 179 aa11.79□□□□□ -0.52
CACTIN-201ENST00000221899 FBN1P35555 2871 aaKnown RBP11.79□□□□□ -0.52
CACTIN-201ENST00000221899 SPRR4Q96PI1 79 aa11.79□□□□□ -0.52
CACTIN-201ENST00000221899 REG3GQ6UW15 175 aa11.78□□□□□ -0.52
CACTIN-201ENST00000221899 DEFB116Q30KQ4 102 aa11.78□□□□□ -0.52
CACTIN-201ENST00000221899 KRTAP24-1Q3LI83 254 aa11.77□□□□□ -0.53
CACTIN-201ENST00000221899 LINC00476Q8WZB0 136 aa11.77□□□□□ -0.53
CACTIN-201ENST00000221899 A0A1B0GW54 56 aa11.77□□□□□ -0.53
CACTIN-201ENST00000221899 CMYA5Q8N3K9 4069 aa11.76□□□□□ -0.53
CACTIN-201ENST00000221899 PRLHP81277 87 aa11.75□□□□□ -0.53
CACTIN-201ENST00000221899 IGKV2-24A0A0C4DH68 120 aa11.75□□□□□ -0.53
CACTIN-201ENST00000221899 IGFL1Q6UW32 110 aa11.71□□□□□ -0.53
CACTIN-201ENST00000221899 DNAH1Q9P2D7 4330 aa11.7□□□□□ -0.54
CACTIN-201ENST00000221899 PSCAO43653 123 aa11.7□□□□□ -0.54
CACTIN-201ENST00000221899 A0A096LNI7 61 aa11.7□□□□□ -0.54
CACTIN-201ENST00000221899 PRO0628Q9UI54 55 aa11.7□□□□□ -0.54
CACTIN-201ENST00000221899 LRCOL1A6NCL2 159 aa11.69□□□□□ -0.54
CACTIN-201ENST00000221899 LCE6AA0A183 80 aa11.68□□□□□ -0.54
CACTIN-201ENST00000221899 HCG22E2RYF7 251 aa11.68□□□□□ -0.54
CACTIN-201ENST00000221899 WFDC13Q8IUB5 93 aa11.67□□□□□ -0.54
CACTIN-201ENST00000221899 NBEAL1Q6ZS30 2694 aa11.67□□□□□ -0.54
CACTIN-201ENST00000221899 A0A087WSZ3 146 aa11.67□□□□□ -0.54
CACTIN-201ENST00000221899 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.66□□□□□ -0.54
CACTIN-201ENST00000221899 COL6A5A8TX70 2615 aa11.66□□□□□ -0.54
CACTIN-201ENST00000221899 PRR4Q16378 134 aa11.66□□□□□ -0.54
CACTIN-201ENST00000221899 BRK1Q8WUW1 75 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms