RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 LRP1Q07954 4544 aaKnown RBP14.34□□□□□ -0.11
HOMER3-201ENST00000221222 KRTAP4-16G5E9R7 235 aaPredicted RBP14.34□□□□□ -0.11
HOMER3-201ENST00000221222 UBE2AP49459 152 aa14.34□□□□□ -0.11
HOMER3-201ENST00000221222 OR13C6PQ8NH95 151 aa14.34□□□□□ -0.11
HOMER3-201ENST00000221222 CBY1Q9Y3M2 126 aa14.34□□□□□ -0.11
HOMER3-201ENST00000221222 TRAV23DV6A0A075B6W5 121 aa14.33□□□□□ -0.12
HOMER3-201ENST00000221222 A4D1N5 150 aa14.33□□□□□ -0.12
HOMER3-201ENST00000221222 UQCR10Q9UDW1 63 aa14.33□□□□□ -0.12
HOMER3-201ENST00000221222 H0Y9J4 135 aa14.32□□□□□ -0.12
HOMER3-201ENST00000221222 TAL2Q16559 108 aa14.32□□□□□ -0.12
HOMER3-201ENST00000221222 PRLHP81277 87 aa14.31□□□□□ -0.12
HOMER3-201ENST00000221222 TRAV13-2A0A0B4J235 113 aa14.29□□□□□ -0.12
HOMER3-201ENST00000221222 FAT3Q8TDW7 4589 aa14.29□□□□□ -0.12
HOMER3-201ENST00000221222 ETDCA0A1B0GVM5 59 aa14.28□□□□□ -0.12
HOMER3-201ENST00000221222 ZNF73O43830 326 aaPredicted RBP14.28□□□□□ -0.12
HOMER3-201ENST00000221222 A6NDN8 102 aa14.27□□□□□ -0.12
HOMER3-201ENST00000221222 B5MCH6 92 aa14.25□□□□□ -0.13
HOMER3-201ENST00000221222 CEND1Q8N111 149 aa14.25□□□□□ -0.13
HOMER3-201ENST00000221222 OXTP01178 125 aa14.24□□□□□ -0.13
HOMER3-201ENST00000221222 HSD52Q0P140 79 aa14.22□□□□□ -0.13
HOMER3-201ENST00000221222 Q6ZRX8 168 aa14.22□□□□□ -0.13
HOMER3-201ENST00000221222 PRO1933Q9H354 126 aa14.22□□□□□ -0.13
HOMER3-201ENST00000221222 C12orf57Q99622 126 aa14.22□□□□□ -0.13
HOMER3-201ENST00000221222 HIGD2AQ9BW72 106 aa14.21□□□□□ -0.14
HOMER3-201ENST00000221222 HINT1P49773 126 aaPredicted RBP14.2□□□□□ -0.14
HOMER3-201ENST00000221222 KRTAP1-4P0C5Y4 121 aa14.19□□□□□ -0.14
HOMER3-201ENST00000221222 CFC1BP0CG36 223 aa14.19□□□□□ -0.14
HOMER3-201ENST00000221222 CFC1P0CG37 223 aa14.19□□□□□ -0.14
HOMER3-201ENST00000221222 C6orf99Q4VX62 202 aa14.19□□□□□ -0.14
HOMER3-201ENST00000221222 LINC01600Q96MT4 127 aa14.19□□□□□ -0.14
HOMER3-201ENST00000221222 TMEM238LA0A1B0GVL6 79 aa14.18□□□□□ -0.14
HOMER3-201ENST00000221222 A6NJY4 79 aa14.18□□□□□ -0.14
HOMER3-201ENST00000221222 SMCR5Q8TEV8 140 aa14.18□□□□□ -0.14
HOMER3-201ENST00000221222 FXYD2P54710 66 aa14.17□□□□□ -0.14
HOMER3-201ENST00000221222 SMIM11BQ8TCY0 68 aa14.17□□□□□ -0.14
HOMER3-201ENST00000221222 A0A0B4J2C4 111 aa14.16□□□□□ -0.14
HOMER3-201ENST00000221222 TRBV7-6A0A0J9YX20 115 aa14.16□□□□□ -0.14
HOMER3-201ENST00000221222 RPL13AP40429 203 aaKnown RBP14.16□□□□□ -0.14
HOMER3-201ENST00000221222 Q9BRP9 147 aa14.16□□□□□ -0.14
HOMER3-201ENST00000221222 HMCN2Q8NDA2 5059 aa14.16□□□□□ -0.14
HOMER3-201ENST00000221222 ELOF1P60002 83 aaKnown RBP14.14□□□□□ -0.15
HOMER3-201ENST00000221222 COX7BP24311 80 aa14.13□□□□□ -0.15
HOMER3-201ENST00000221222 RAB37Q96AX2 223 aa14.13□□□□□ -0.15
HOMER3-201ENST00000221222 A0A1B0GWB2 263 aa14.1□□□□□ -0.15
HOMER3-201ENST00000221222 TSTD3H0UI37 97 aa14.1□□□□□ -0.15
HOMER3-201ENST00000221222 ERC2-IT1O76042 136 aa14.09□□□□□ -0.15
HOMER3-201ENST00000221222 MT1HL1P0DM35 61 aa14.09□□□□□ -0.15
HOMER3-201ENST00000221222 DHRS4-AS1Q9P1J3 65 aa14.09□□□□□ -0.15
HOMER3-201ENST00000221222 ZNF706Q9Y5V0 76 aaPredicted RBP14.09□□□□□ -0.15
HOMER3-201ENST00000221222 SPRR4Q96PI1 79 aa14.08□□□□□ -0.16
HOMER3-201ENST00000221222 PRO1854Q9UHT4 67 aa14.08□□□□□ -0.16
HOMER3-201ENST00000221222 KRTAP10-8P60410 259 aa14.07□□□□□ -0.16
HOMER3-201ENST00000221222 NHP2Q9NX24 153 aaKnown RBP14.06□□□□□ -0.16
HOMER3-201ENST00000221222 FAM229BQ4G0N7 80 aa14.05□□□□□ -0.16
HOMER3-201ENST00000221222 BVES-AS1Q5T3Y7 98 aa14.05□□□□□ -0.16
HOMER3-201ENST00000221222 PRR26Q8N8Z3 221 aa14.05□□□□□ -0.16
HOMER3-201ENST00000221222 CTAG1AP78358 180 aa14.04□□□□□ -0.16
HOMER3-201ENST00000221222 VAMP3Q15836 100 aa14.04□□□□□ -0.16
HOMER3-201ENST00000221222 H7C2G1 150 aa14.03□□□□□ -0.16
HOMER3-201ENST00000221222 ANAPC11Q9NYG5 84 aa14.03□□□□□ -0.16
HOMER3-201ENST00000221222 A0A087X002 238 aa14.01□□□□□ -0.17
HOMER3-201ENST00000221222 CRYGAP11844 174 aa14.01□□□□□ -0.17
HOMER3-201ENST00000221222 TNXBP22105 4242 aa14□□□□□ -0.17
HOMER3-201ENST00000221222 LINC00483Q53H64 154 aa14□□□□□ -0.17
HOMER3-201ENST00000221222 M0R143 59 aa13.99□□□□□ -0.17
HOMER3-201ENST00000221222 UBR4Q5T4S7 5183 aa13.98□□□□□ -0.17
HOMER3-201ENST00000221222 K7ERJ3 54 aa13.98□□□□□ -0.17
HOMER3-201ENST00000221222 Q1RN00 199 aa13.97□□□□□ -0.17
HOMER3-201ENST00000221222 ST20-AS1Q8NBB2 130 aa13.97□□□□□ -0.17
HOMER3-201ENST00000221222 GAGE2AQ6NT46 116 aa13.96□□□□□ -0.17
HOMER3-201ENST00000221222 LINC00575Q6W349 94 aa13.96□□□□□ -0.17
HOMER3-201ENST00000221222 KRTAP13-2Q52LG2 175 aa13.95□□□□□ -0.18
HOMER3-201ENST00000221222 SLC25A20O43772 301 aa13.94□□□□□ -0.18
HOMER3-201ENST00000221222 H0YGX0 51 aa13.91□□□□□ -0.18
HOMER3-201ENST00000221222 SPRR1BP22528 89 aa13.91□□□□□ -0.18
HOMER3-201ENST00000221222 TSPAN13O95857 204 aa13.9□□□□□ -0.18
HOMER3-201ENST00000221222 TYMSOSQ8TAI1 123 aa13.9□□□□□ -0.18
HOMER3-201ENST00000221222 hADV29S1A0JD25 119 aa13.89□□□□□ -0.19
HOMER3-201ENST00000221222 TRIAP1O43715 76 aa13.89□□□□□ -0.19
HOMER3-201ENST00000221222 IGLV5-48A0A075B6I7 105 aa13.87□□□□□ -0.19
HOMER3-201ENST00000221222 C3orf22Q8N5N4 141 aa13.87□□□□□ -0.19
HOMER3-201ENST00000221222 LINC01547P58512 204 aaPredicted RBP13.86□□□□□ -0.19
HOMER3-201ENST00000221222 TEX49A0A1B0GTD5 131 aa13.85□□□□□ -0.19
HOMER3-201ENST00000221222 PSMB2P49721 201 aa13.83□□□□□ -0.19
HOMER3-201ENST00000221222 Q6ZQY7 126 aa13.83□□□□□ -0.19
HOMER3-201ENST00000221222 DEFB105AQ8NG35 78 aa13.83□□□□□ -0.19
HOMER3-201ENST00000221222 FAM218AQ96MZ4 157 aa13.83□□□□□ -0.19
HOMER3-201ENST00000221222 A0A1B0GX51 115 aa13.82□□□□□ -0.2
HOMER3-201ENST00000221222 COX6CP09669 75 aa13.82□□□□□ -0.2
HOMER3-201ENST00000221222 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.82□□□□□ -0.2
HOMER3-201ENST00000221222 SNCGO76070 127 aa13.81□□□□□ -0.2
HOMER3-201ENST00000221222 IGLV9-49A0A0B4J1Y8 123 aa13.8□□□□□ -0.2
HOMER3-201ENST00000221222 Q8N377 158 aa13.79□□□□□ -0.2
HOMER3-201ENST00000221222 LAMTOR3Q9UHA4 124 aa13.79□□□□□ -0.2
HOMER3-201ENST00000221222 BATFQ16520 125 aa13.78□□□□□ -0.2
HOMER3-201ENST00000221222 MOBPQ13875 183 aa13.77□□□□□ -0.21
HOMER3-201ENST00000221222 SMIM29Q86T20 159 aa13.77□□□□□ -0.21
HOMER3-201ENST00000221222 CLEC2BQ92478 149 aa13.77□□□□□ -0.21
HOMER3-201ENST00000221222 SSBP3-AS1Q7Z2R9 100 aa13.76□□□□□ -0.21
HOMER3-201ENST00000221222 LINC00304Q8N9R0 145 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms