RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 DEFB130BP0DP73 79 aa9.18□□□□□ -0.94
GABPB1-201ENST00000220429 DEFB130AP0DP74 79 aa9.18□□□□□ -0.94
GABPB1-201ENST00000220429 X6R8D5 127 aa9.18□□□□□ -0.94
GABPB1-201ENST00000220429 A6NN06 94 aa9.18□□□□□ -0.94
GABPB1-201ENST00000220429 IGHV3OR16-9A0A0B4J2B5 98 aa9.17□□□□□ -0.94
GABPB1-201ENST00000220429 HCG22E2RYF7 251 aa9.17□□□□□ -0.94
GABPB1-201ENST00000220429 LINC00612Q8N6U2 182 aa9.17□□□□□ -0.94
GABPB1-201ENST00000220429 CYP4F30PQ9H0H9 118 aa9.17□□□□□ -0.94
GABPB1-201ENST00000220429 Q6ZQY7 126 aa9.16□□□□□ -0.94
GABPB1-201ENST00000220429 FAM30AQ9NZY2 134 aa9.16□□□□□ -0.94
GABPB1-201ENST00000220429 LCE6AA0A183 80 aa9.16□□□□□ -0.94
GABPB1-201ENST00000220429 H3BQ85 93 aa9.16□□□□□ -0.94
GABPB1-201ENST00000220429 IGLV4-60A0A075B6I1 120 aa9.14□□□□□ -0.95
GABPB1-201ENST00000220429 CELA1Q9UNI1 258 aa9.14□□□□□ -0.95
GABPB1-201ENST00000220429 ZCCHC13Q8WW36 166 aaKnown RBP9.13□□□□□ -0.95
GABPB1-201ENST00000220429 PRR4Q16378 134 aa9.13□□□□□ -0.95
GABPB1-201ENST00000220429 C7orf65Q6ZTY9 151 aa9.13□□□□□ -0.95
GABPB1-201ENST00000220429 DIRC1Q969H9 104 aa9.12□□□□□ -0.95
GABPB1-201ENST00000220429 LCA10Q71F78 164 aa9.12□□□□□ -0.95
GABPB1-201ENST00000220429 GYPEP15421 78 aa9.11□□□□□ -0.95
GABPB1-201ENST00000220429 PRB2P02812 416 aaPredicted RBP9.11□□□□□ -0.95
GABPB1-201ENST00000220429 DEFB135Q30KP9 77 aa9.11□□□□□ -0.95
GABPB1-201ENST00000220429 SMIM29Q86T20 159 aa9.11□□□□□ -0.95
GABPB1-201ENST00000220429 CMYA5Q8N3K9 4069 aa9.1□□□□□ -0.95
GABPB1-201ENST00000220429 COX7BP24311 80 aa9.1□□□□□ -0.95
GABPB1-201ENST00000220429 LIMD2Q9BT23 127 aa9.1□□□□□ -0.95
GABPB1-201ENST00000220429 DEFB4AO15263 64 aa9.09□□□□□ -0.95
GABPB1-201ENST00000220429 PRO0255Q9UI72 69 aa9.09□□□□□ -0.95
GABPB1-201ENST00000220429 C10orf25Q5T742 122 aa9.08□□□□□ -0.96
GABPB1-201ENST00000220429 PRR15LQ9BU68 103 aa9.08□□□□□ -0.96
GABPB1-201ENST00000220429 Q8N9P0 234 aaPredicted RBP9.07□□□□□ -0.96
GABPB1-201ENST00000220429 A0A096LPF7 62 aa9.07□□□□□ -0.96
GABPB1-201ENST00000220429 ANK2Q01484 3957 aa9.06□□□□□ -0.96
GABPB1-201ENST00000220429 F8P00451 2351 aa9.06□□□□□ -0.96
GABPB1-201ENST00000220429 IGHV4-28A0A0C4DH34 117 aa9.06□□□□□ -0.96
GABPB1-201ENST00000220429 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.06□□□□□ -0.96
GABPB1-201ENST00000220429 Q8IZM0 81 aa9.05□□□□□ -0.96
GABPB1-201ENST00000220429 Q8NDZ9 215 aa9.05□□□□□ -0.96
GABPB1-201ENST00000220429 LINC00959A0A1B0GUT2 108 aa9.05□□□□□ -0.96
GABPB1-201ENST00000220429 A6NED7 52 aa9.05□□□□□ -0.96
GABPB1-201ENST00000220429 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.04□□□□□ -0.96
GABPB1-201ENST00000220429 A0A1B0GUV1 79 aa9.03□□□□□ -0.96
GABPB1-201ENST00000220429 Q8NAQ8 132 aa9.03□□□□□ -0.96
GABPB1-201ENST00000220429 COX17Q14061 63 aa9.03□□□□□ -0.96
GABPB1-201ENST00000220429 Q75L30 129 aa9.03□□□□□ -0.96
GABPB1-201ENST00000220429 KLK12Q9UKR0 248 aa9.02□□□□□ -0.97
GABPB1-201ENST00000220429 ETDCA0A1B0GVM5 59 aa9.02□□□□□ -0.97
GABPB1-201ENST00000220429 NDUFB1O75438 58 aa9.01□□□□□ -0.97
GABPB1-201ENST00000220429 B9D2Q9BPU9 175 aa9.01□□□□□ -0.97
GABPB1-201ENST00000220429 FLNBO75369 2602 aaKnown RBP9.01□□□□□ -0.97
GABPB1-201ENST00000220429 IGHV4-30-4P0DP06 118 aa9.01□□□□□ -0.97
GABPB1-201ENST00000220429 HIGD2BQ4VC39 106 aa9.01□□□□□ -0.97
GABPB1-201ENST00000220429 CLPSL2Q6UWE3 100 aa9.01□□□□□ -0.97
GABPB1-201ENST00000220429 CDC42SE1Q9NRR8 79 aa9.01□□□□□ -0.97
GABPB1-201ENST00000220429 NKAPP1Q8N9T2 125 aa9□□□□□ -0.97
GABPB1-201ENST00000220429 C3orf84H3BNL1 204 aa8.98□□□□□ -0.97
GABPB1-201ENST00000220429 IGLV6-57P01721 117 aa8.98□□□□□ -0.97
GABPB1-201ENST00000220429 ELOF1P60002 83 aaKnown RBP8.98□□□□□ -0.97
GABPB1-201ENST00000220429 PKD1L1Q8TDX9 2849 aa8.98□□□□□ -0.97
GABPB1-201ENST00000220429 C9orf116Q5BN46 136 aaPredicted RBP8.98□□□□□ -0.97
GABPB1-201ENST00000220429 ST20-AS1Q8NBB2 130 aa8.98□□□□□ -0.97
GABPB1-201ENST00000220429 DNAH3Q8TD57 4116 aa8.98□□□□□ -0.97
GABPB1-201ENST00000220429 LINC00208Q96KT6 92 aa8.97□□□□□ -0.97
GABPB1-201ENST00000220429 SPART-AS1P0CW21 52 aa8.96□□□□□ -0.97
GABPB1-201ENST00000220429 MOBPQ13875 183 aa8.96□□□□□ -0.97
GABPB1-201ENST00000220429 LOC101927531A0A1B0GV80 90 aa8.96□□□□□ -0.98
GABPB1-201ENST00000220429 HTN3P15516 51 aa8.96□□□□□ -0.98
GABPB1-201ENST00000220429 FBN1P35555 2871 aaKnown RBP8.95□□□□□ -0.98
GABPB1-201ENST00000220429 STAB1Q9NY15 2570 aa8.95□□□□□ -0.98
GABPB1-201ENST00000220429 OXLD1Q5BKU9 147 aa8.95□□□□□ -0.98
GABPB1-201ENST00000220429 PRR26Q8N8Z3 221 aa8.94□□□□□ -0.98
GABPB1-201ENST00000220429 ANGP03950 147 aaKnown RBP8.94□□□□□ -0.98
GABPB1-201ENST00000220429 KIAA0087Q14695 138 aa8.94□□□□□ -0.98
GABPB1-201ENST00000220429 IGLV10-54A0A075B6I4 117 aa8.93□□□□□ -0.98
GABPB1-201ENST00000220429 KRTAP10-11P60412 298 aa8.93□□□□□ -0.98
GABPB1-201ENST00000220429 REG3AQ06141 175 aa8.93□□□□□ -0.98
GABPB1-201ENST00000220429 CHCHD10Q8WYQ3 142 aaPredicted RBP8.93□□□□□ -0.98
GABPB1-201ENST00000220429 Q9BRP9 147 aa8.92□□□□□ -0.98
GABPB1-201ENST00000220429 KRTAP24-1Q3LI83 254 aa8.91□□□□□ -0.98
GABPB1-201ENST00000220429 LELP1Q5T871 98 aa8.9□□□□□ -0.98
GABPB1-201ENST00000220429 MDFIQ99750 246 aa8.89□□□□□ -0.99
GABPB1-201ENST00000220429 TENM3Q9P273 2699 aa8.89□□□□□ -0.99
GABPB1-201ENST00000220429 SPANXA2-OT1Q8N9U9 137 aa8.88□□□□□ -0.99
GABPB1-201ENST00000220429 MAST4O15021 2626 aa8.88□□□□□ -0.99
GABPB1-201ENST00000220429 VPREB1P12018 145 aa8.87□□□□□ -0.99
GABPB1-201ENST00000220429 MP68P56378 58 aa8.87□□□□□ -0.99
GABPB1-201ENST00000220429 LINC00313P59037 77 aa8.87□□□□□ -0.99
GABPB1-201ENST00000220429 LINC01554Q52M75 96 aa8.87□□□□□ -0.99
GABPB1-201ENST00000220429 EGFEM1PQ0D2K5 195 aa8.86□□□□□ -0.99
GABPB1-201ENST00000220429 KCNQ1DNQ9H478 68 aa8.85□□□□□ -0.99
GABPB1-201ENST00000220429 PRR34Q9NV39 138 aa8.85□□□□□ -0.99
GABPB1-201ENST00000220429 PRAC1Q96KF2 57 aa8.84□□□□□ -0.99
GABPB1-201ENST00000220429 DSCR10P59022 87 aa8.83□□□□□ -1
GABPB1-201ENST00000220429 K7EQZ3 153 aa8.83□□□□□ -1
GABPB1-201ENST00000220429 NOTCH1P46531 2555 aa8.82□□□□□ -1
GABPB1-201ENST00000220429 KPRPQ5T749 579 aaPredicted RBP8.82□□□□□ -1
GABPB1-201ENST00000220429 A0A1B0GW54 56 aa8.82□□□□□ -1
GABPB1-201ENST00000220429 UNQ6190/PRO20217Q6UXQ8 127 aa8.81□□□□□ -1
GABPB1-201ENST00000220429 SPAG11BQ08648 103 aa8.81□□□□□ -1
GABPB1-201ENST00000220429 H3BNG1 76 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms