RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 STAB1Q9NY15 2570 aa2.97□□□□□ -1.93
CHD9-201ENST00000219084 IGLV1-50A0A075B6I6 118 aa2.97□□□□□ -1.93
CHD9-201ENST00000219084 UQCR11O14957 56 aa2.97□□□□□ -1.93
CHD9-201ENST00000219084 H7BZZ5 65 aa2.96□□□□□ -1.94
CHD9-201ENST00000219084 SERTAD4-AS1Q5TG53 156 aa2.96□□□□□ -1.94
CHD9-201ENST00000219084 COA5Q86WW8 74 aa2.96□□□□□ -1.94
CHD9-201ENST00000219084 M0R2N4 97 aa2.96□□□□□ -1.94
CHD9-201ENST00000219084 Q1T7F1 81 aa2.96□□□□□ -1.94
CHD9-201ENST00000219084 NIPBLQ6KC79 2804 aaeCLIP2.96□□□□□ -1.941e-5■□□□□ 11.1
CHD9-201ENST00000219084 IGLV5-37A0A075B6J1 123 aa2.96□□□□□ -1.94
CHD9-201ENST00000219084 KTN1-AS1Q86SY8 53 aa2.96□□□□□ -1.94
CHD9-201ENST00000219084 MRPL34Q9BQ48 92 aaKnown RBP2.96□□□□□ -1.94
CHD9-201ENST00000219084 USP24Q9UPU5 2620 aa2.96□□□□□ -1.94
CHD9-201ENST00000219084 DSPP15924 2871 aaKnown RBP2.95□□□□□ -1.94
CHD9-201ENST00000219084 BAHCC1Q9P281 2608 aa2.95□□□□□ -1.94
CHD9-201ENST00000219084 IGKV2D-30A0A075B6S6 120 aa2.95□□□□□ -1.94
CHD9-201ENST00000219084 NBDYA0A0U1RRE5 68 aa2.95□□□□□ -1.94
CHD9-201ENST00000219084 IGKV2-30P06310 120 aa2.95□□□□□ -1.94
CHD9-201ENST00000219084 CENPFP49454 3210 aa2.95□□□□□ -1.94
CHD9-201ENST00000219084 MDFIQ99750 246 aa2.95□□□□□ -1.94
CHD9-201ENST00000219084 K7EQZ3 153 aa2.94□□□□□ -1.94
CHD9-201ENST00000219084 KRTAP10-9P60411 292 aa2.94□□□□□ -1.94
CHD9-201ENST00000219084 DEFB116Q30KQ4 102 aa2.94□□□□□ -1.94
CHD9-201ENST00000219084 AKAP13Q12802 2813 aa2.94□□□□□ -1.94
CHD9-201ENST00000219084 A0A1B0GVX0 72 aa2.94□□□□□ -1.94
CHD9-201ENST00000219084 TRANK1O15050 2925 aa2.94□□□□□ -1.94
CHD9-201ENST00000219084 ST20-AS1Q8NBB2 130 aa2.94□□□□□ -1.94
CHD9-201ENST00000219084 SSBP3-AS1Q7Z2R9 100 aa2.93□□□□□ -1.94
CHD9-201ENST00000219084 LINC00588Q9Y4M8 146 aa2.93□□□□□ -1.94
CHD9-201ENST00000219084 CNBPP62633 177 aaKnown RBP2.93□□□□□ -1.94
CHD9-201ENST00000219084 IGLV5-48A0A075B6I7 105 aa2.93□□□□□ -1.94
CHD9-201ENST00000219084 RTL8CO15255 209 aa2.93□□□□□ -1.94
CHD9-201ENST00000219084 FLNBO75369 2602 aaKnown RBP2.93□□□□□ -1.94
CHD9-201ENST00000219084 COL6A5A8TX70 2615 aa2.93□□□□□ -1.94
CHD9-201ENST00000219084 IGFL1Q6UW32 110 aa2.92□□□□□ -1.94
CHD9-201ENST00000219084 TEP1Q99973 2627 aaKnown RBP2.92□□□□□ -1.94
CHD9-201ENST00000219084 A8MUN3 132 aa2.92□□□□□ -1.94
CHD9-201ENST00000219084 C15orf56Q8N910 161 aa2.92□□□□□ -1.94
CHD9-201ENST00000219084 CDC42SE1Q9NRR8 79 aa2.92□□□□□ -1.94
CHD9-201ENST00000219084 C8orf17Q9NRJ1 99 aa2.92□□□□□ -1.94
CHD9-201ENST00000219084 FAM104AQ969W3 186 aa2.91□□□□□ -1.94
CHD9-201ENST00000219084 SPRR4Q96PI1 79 aa2.91□□□□□ -1.94
CHD9-201ENST00000219084 FLNAP21333 2647 aaKnown RBP2.91□□□□□ -1.94
CHD9-201ENST00000219084 SPINK1P00995 79 aa2.91□□□□□ -1.94
CHD9-201ENST00000219084 Q8N377 158 aa2.91□□□□□ -1.94
CHD9-201ENST00000219084 TYMSOSQ8TAI1 123 aa2.91□□□□□ -1.94
CHD9-201ENST00000219084 MIR22HGQ0VDD5 57 aa2.91□□□□□ -1.94
CHD9-201ENST00000219084 DNAH12Q6ZR08 3092 aa2.91□□□□□ -1.94
CHD9-201ENST00000219084 SMR3AQ99954 134 aa2.91□□□□□ -1.94
CHD9-201ENST00000219084 C19orf73Q9NVV2 129 aa2.91□□□□□ -1.94
CHD9-201ENST00000219084 CHD6Q8TD26 2715 aa2.91□□□□□ -1.94
CHD9-201ENST00000219084 Q9UF83 564 aa2.9□□□□□ -1.94
CHD9-201ENST00000219084 HECTD1Q9ULT8 2610 aa2.9□□□□□ -1.94
CHD9-201ENST00000219084 A0A096LNT2 108 aa2.9□□□□□ -1.94
CHD9-201ENST00000219084 ZNF861PO60384 105 aa2.9□□□□□ -1.94
CHD9-201ENST00000219084 LCA10Q71F78 164 aa2.9□□□□□ -1.95
CHD9-201ENST00000219084 OCR1Q9BZK8 76 aa2.9□□□□□ -1.95
CHD9-201ENST00000219084 PLA2G1BP04054 148 aaKnown RBP2.9□□□□□ -1.95
CHD9-201ENST00000219084 C9orf129Q5T035 196 aaKnown RBP2.89□□□□□ -1.95
CHD9-201ENST00000219084 SPACA4Q8TDM5 124 aa2.89□□□□□ -1.95
CHD9-201ENST00000219084 Q75L30 129 aa2.89□□□□□ -1.95
CHD9-201ENST00000219084 GIG44P09565 113 aaPredicted RBP2.89□□□□□ -1.95
CHD9-201ENST00000219084 HIVEP1P15822 2718 aa2.87□□□□□ -1.95
CHD9-201ENST00000219084 FAM168BA1KXE4 195 aa2.87□□□□□ -1.95
CHD9-201ENST00000219084 Q96NJ1 140 aa2.87□□□□□ -1.95
CHD9-201ENST00000219084 CRIPTQ9P021 101 aa2.87□□□□□ -1.95
CHD9-201ENST00000219084 C9orf163Q8N9P6 203 aa2.87□□□□□ -1.95
CHD9-201ENST00000219084 STAB2Q8WWQ8 2551 aa2.87□□□□□ -1.95
CHD9-201ENST00000219084 IGLV7-46A0A075B6I9 117 aa2.86□□□□□ -1.95
CHD9-201ENST00000219084 LINC00304Q8N9R0 145 aa2.86□□□□□ -1.95
CHD9-201ENST00000219084 ZNF575Q86XF7 245 aa2.86□□□□□ -1.95
CHD9-201ENST00000219084 SPINT4Q6UDR6 99 aa2.85□□□□□ -1.95
CHD9-201ENST00000219084 FAM229BQ4G0N7 80 aa2.85□□□□□ -1.95
CHD9-201ENST00000219084 J3QL48 77 aa2.84□□□□□ -1.95
CHD9-201ENST00000219084 FLNCQ14315 2725 aa2.84□□□□□ -1.95
CHD9-201ENST00000219084 IGLV8-61A0A075B6I0 122 aa2.84□□□□□ -1.95
CHD9-201ENST00000219084 CHTF8P0CG12 524 aa2.84□□□□□ -1.95
CHD9-201ENST00000219084 WWC2-AS2Q96NR7 200 aa2.84□□□□□ -1.95
CHD9-201ENST00000219084 FLG2Q5D862 2391 aaPredicted RBP2.84□□□□□ -1.95
CHD9-201ENST00000219084 LRBAP50851 2863 aa2.84□□□□□ -1.95
CHD9-201ENST00000219084 IGLV7-43P04211 117 aa2.84□□□□□ -1.96
CHD9-201ENST00000219084 A0A1W2PNM2 257 aa2.83□□□□□ -1.96
CHD9-201ENST00000219084 MAST4O15021 2626 aa2.83□□□□□ -1.96
CHD9-201ENST00000219084 A0A087WTM6 91 aa2.83□□□□□ -1.96
CHD9-201ENST00000219084 KRTAP24-1Q3LI83 254 aa2.83□□□□□ -1.96
CHD9-201ENST00000219084 KRTAP10-11P60412 298 aa2.82□□□□□ -1.96
CHD9-201ENST00000219084 SPRR1AP35321 89 aa2.81□□□□□ -1.96
CHD9-201ENST00000219084 DMBT1Q9UGM3 2413 aaPredicted RBP2.81□□□□□ -1.96
CHD9-201ENST00000219084 DSCR10P59022 87 aa2.81□□□□□ -1.96
CHD9-201ENST00000219084 LINC01558Q9Y6Z2 57 aa2.81□□□□□ -1.96
CHD9-201ENST00000219084 RBM12B-AS1Q9P1G2 102 aa2.81□□□□□ -1.96
CHD9-201ENST00000219084 SRRM2Q9UQ35 2752 aaKnown RBP2.81□□□□□ -1.96
CHD9-201ENST00000219084 SPRR1BP22528 89 aa2.8□□□□□ -1.96
CHD9-201ENST00000219084 NSD1Q96L73 2696 aaPredicted RBP2.8□□□□□ -1.96
CHD9-201ENST00000219084 K7EIL1 84 aa2.8□□□□□ -1.96
CHD9-201ENST00000219084 Q5XG85 94 aa2.8□□□□□ -1.96
CHD9-201ENST00000219084 PSORS1C2Q9UIG4 136 aa2.8□□□□□ -1.96
CHD9-201ENST00000219084 APLNQ9ULZ1 77 aa2.79□□□□□ -1.96
CHD9-201ENST00000219084 LCE6AA0A183 80 aa2.79□□□□□ -1.96
CHD9-201ENST00000219084 KRTAP1-3Q8IUG1 177 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms