RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 PRO0461Q9UI25 63 aa9.87□□□□□ -0.83
SPTLC2-201ENST00000216484 IGLV5-48A0A075B6I7 105 aa9.87□□□□□ -0.83
SPTLC2-201ENST00000216484 NBDYA0A0U1RRE5 68 aa9.87□□□□□ -0.83
SPTLC2-201ENST00000216484 LINC00304Q8N9R0 145 aa9.86□□□□□ -0.83
SPTLC2-201ENST00000216484 EPG5Q9HCE0 2579 aa9.85□□□□□ -0.83
SPTLC2-201ENST00000216484 PRR15Q8IV56 129 aa9.85□□□□□ -0.83
SPTLC2-201ENST00000216484 IGLV5-45A0A087WSX0 123 aa9.84□□□□□ -0.83
SPTLC2-201ENST00000216484 AKAP13Q12802 2813 aa9.84□□□□□ -0.83
SPTLC2-201ENST00000216484 WIPF1O43516 503 aa9.84□□□□□ -0.83
SPTLC2-201ENST00000216484 C8orf17Q9NRJ1 99 aa9.83□□□□□ -0.84
SPTLC2-201ENST00000216484 GVQW2A0A096LPI5 108 aaPredicted RBP9.83□□□□□ -0.84
SPTLC2-201ENST00000216484 A0A1B0GVX0 72 aa9.82□□□□□ -0.84
SPTLC2-201ENST00000216484 H3BNG1 76 aa9.81□□□□□ -0.84
SPTLC2-201ENST00000216484 LINC00588Q9Y4M8 146 aa9.81□□□□□ -0.84
SPTLC2-201ENST00000216484 CEP350Q5VT06 3117 aa9.8□□□□□ -0.84
SPTLC2-201ENST00000216484 IGFL1Q6UW32 110 aa9.79□□□□□ -0.84
SPTLC2-201ENST00000216484 Q8N1X5 172 aa9.79□□□□□ -0.84
SPTLC2-201ENST00000216484 FAM104AQ969W3 186 aa9.79□□□□□ -0.84
SPTLC2-201ENST00000216484 Q1T7F1 81 aa9.79□□□□□ -0.84
SPTLC2-201ENST00000216484 UTRNP46939 3433 aa9.78□□□□□ -0.84
SPTLC2-201ENST00000216484 CAMK2N1Q7Z7J9 78 aa9.77□□□□□ -0.85
SPTLC2-201ENST00000216484 KLKP1Q107X0 134 aa9.76□□□□□ -0.85
SPTLC2-201ENST00000216484 PCNTO95613 3336 aa9.73□□□□□ -0.85
SPTLC2-201ENST00000216484 DNAH12Q6ZR08 3092 aa9.72□□□□□ -0.85
SPTLC2-201ENST00000216484 H3BS24 57 aa9.72□□□□□ -0.85
SPTLC2-201ENST00000216484 DNAH10OSP0CZ25 163 aa9.72□□□□□ -0.85
SPTLC2-201ENST00000216484 H7BZZ5 65 aa9.71□□□□□ -0.85
SPTLC2-201ENST00000216484 A0A0A0MQY5 61 aa9.71□□□□□ -0.86
SPTLC2-201ENST00000216484 PLA2G2DQ9UNK4 145 aa9.71□□□□□ -0.86
SPTLC2-201ENST00000216484 A0A0G2JQZ4 141 aa9.69□□□□□ -0.86
SPTLC2-201ENST00000216484 A0A1W2PNN7 141 aa9.69□□□□□ -0.86
SPTLC2-201ENST00000216484 IGLV1-50A0A075B6I6 118 aa9.69□□□□□ -0.86
SPTLC2-201ENST00000216484 ZNF861PO60384 105 aa9.69□□□□□ -0.86
SPTLC2-201ENST00000216484 ANAPC11Q9NYG5 84 aa9.68□□□□□ -0.86
SPTLC2-201ENST00000216484 SMR3BP02814 79 aaPredicted RBP9.67□□□□□ -0.86
SPTLC2-201ENST00000216484 KCNQ1DNQ9H478 68 aa9.67□□□□□ -0.86
SPTLC2-201ENST00000216484 Q8NAQ8 132 aa9.67□□□□□ -0.86
SPTLC2-201ENST00000216484 A0A1W2PPR1 153 aa9.66□□□□□ -0.86
SPTLC2-201ENST00000216484 M0R2T5 61 aa9.66□□□□□ -0.86
SPTLC2-201ENST00000216484 Q8N377 158 aa9.66□□□□□ -0.86
SPTLC2-201ENST00000216484 EP400Q96L91 3159 aa9.66□□□□□ -0.86
SPTLC2-201ENST00000216484 SPANXA2-OT1Q8N9U9 137 aa9.64□□□□□ -0.87
SPTLC2-201ENST00000216484 HECTD1Q9ULT8 2610 aa9.63□□□□□ -0.87
SPTLC2-201ENST00000216484 CFAP46Q8IYW2 2715 aa9.62□□□□□ -0.87
SPTLC2-201ENST00000216484 WWC2-AS2Q96NR7 200 aa9.62□□□□□ -0.87
SPTLC2-201ENST00000216484 LINC00528Q8N1L1 170 aa9.61□□□□□ -0.87
SPTLC2-201ENST00000216484 C15orf56Q8N910 161 aa9.6□□□□□ -0.87
SPTLC2-201ENST00000216484 C5orf42Q9H799 3197 aa9.6□□□□□ -0.87
SPTLC2-201ENST00000216484 COL4A2P08572 1712 aa9.6□□□□□ -0.87
SPTLC2-201ENST00000216484 CEP295Q9C0D2 2601 aa9.59□□□□□ -0.87
SPTLC2-201ENST00000216484 LITAFQ99732 161 aa9.59□□□□□ -0.87
SPTLC2-201ENST00000216484 A0A1B0GU33 70 aa9.58□□□□□ -0.88
SPTLC2-201ENST00000216484 TLX1NBP0CAT3 122 aa9.58□□□□□ -0.88
SPTLC2-201ENST00000216484 C9orf163Q8N9P6 203 aa9.56□□□□□ -0.88
SPTLC2-201ENST00000216484 Q6ZSA8 131 aa9.54□□□□□ -0.88
SPTLC2-201ENST00000216484 STAB1Q9NY15 2570 aa9.53□□□□□ -0.88
SPTLC2-201ENST00000216484 CFAP54Q96N23 3096 aa9.53□□□□□ -0.88
SPTLC2-201ENST00000216484 PRR26Q8N8Z3 221 aa9.51□□□□□ -0.89
SPTLC2-201ENST00000216484 IGLV7-43P04211 117 aa9.51□□□□□ -0.89
SPTLC2-201ENST00000216484 MGAM2Q2M2H8 2515 aa9.51□□□□□ -0.89
SPTLC2-201ENST00000216484 SPINK7P58062 85 aa9.49□□□□□ -0.89
SPTLC2-201ENST00000216484 PSORS1C2Q9UIG4 136 aa9.49□□□□□ -0.89
SPTLC2-201ENST00000216484 DMBT1Q9UGM3 2413 aaPredicted RBP9.48□□□□□ -0.89
SPTLC2-201ENST00000216484 KRTAP24-1Q3LI83 254 aa9.48□□□□□ -0.89
SPTLC2-201ENST00000216484 CSAG1Q6PB30 78 aa9.46□□□□□ -0.89
SPTLC2-201ENST00000216484 HRES1P13985 223 aa9.46□□□□□ -0.89
SPTLC2-201ENST00000216484 ATRQ13535 2644 aa9.46□□□□□ -0.89
SPTLC2-201ENST00000216484 A0A087WTM6 91 aa9.45□□□□□ -0.9
SPTLC2-201ENST00000216484 NBEAL1Q6ZS30 2694 aa9.45□□□□□ -0.9
SPTLC2-201ENST00000216484 DMAC1Q96GE9 116 aa9.45□□□□□ -0.9
SPTLC2-201ENST00000216484 LAMA2P24043 3122 aaKnown RBP9.45□□□□□ -0.9
SPTLC2-201ENST00000216484 EIF4EBP3O60516 100 aaPredicted RBP9.44□□□□□ -0.9
SPTLC2-201ENST00000216484 Q75L30 129 aa9.43□□□□□ -0.9
SPTLC2-201ENST00000216484 SPRR4Q96PI1 79 aa9.43□□□□□ -0.9
SPTLC2-201ENST00000216484 REV3LO60673 3130 aa9.42□□□□□ -0.9
SPTLC2-201ENST00000216484 S4R3F8 94 aa9.42□□□□□ -0.9
SPTLC2-201ENST00000216484 MAST4O15021 2626 aa9.42□□□□□ -0.9
SPTLC2-201ENST00000216484 PRAC1Q96KF2 57 aa9.4□□□□□ -0.9
SPTLC2-201ENST00000216484 CENPEQ02224 2701 aa9.4□□□□□ -0.91
SPTLC2-201ENST00000216484 PRR34Q9NV39 138 aa9.36□□□□□ -0.91
SPTLC2-201ENST00000216484 KRTAP10-11P60412 298 aa9.35□□□□□ -0.91
SPTLC2-201ENST00000216484 XIRP2A4UGR9 3374 aa9.35□□□□□ -0.91
SPTLC2-201ENST00000216484 H1FX-AS1Q4G0G2 97 aa9.35□□□□□ -0.91
SPTLC2-201ENST00000216484 CHD6Q8TD26 2715 aa9.34□□□□□ -0.91
SPTLC2-201ENST00000216484 IGLV7-46A0A075B6I9 117 aa9.33□□□□□ -0.92
SPTLC2-201ENST00000216484 A0A1W2PNM2 257 aa9.33□□□□□ -0.92
SPTLC2-201ENST00000216484 FAM229BQ4G0N7 80 aa9.33□□□□□ -0.92
SPTLC2-201ENST00000216484 R4GN34 69 aa9.33□□□□□ -0.92
SPTLC2-201ENST00000216484 OCR1Q9BZK8 76 aa9.33□□□□□ -0.92
SPTLC2-201ENST00000216484 K7EIL1 84 aa9.31□□□□□ -0.92
SPTLC2-201ENST00000216484 LINC00612Q8N6U2 182 aa9.29□□□□□ -0.92
SPTLC2-201ENST00000216484 A0A0C4DFX4 3053 aa9.29□□□□□ -0.92
SPTLC2-201ENST00000216484 ITPR3Q14573 2671 aa9.28□□□□□ -0.92
SPTLC2-201ENST00000216484 LINC01558Q9Y6Z2 57 aa9.27□□□□□ -0.92
SPTLC2-201ENST00000216484 FREM2Q5SZK8 3169 aa9.27□□□□□ -0.93
SPTLC2-201ENST00000216484 Q8N9P0 234 aaPredicted RBP9.26□□□□□ -0.93
SPTLC2-201ENST00000216484 ROMO1P60602 79 aa9.22□□□□□ -0.93
SPTLC2-201ENST00000216484 GIG44P09565 113 aaPredicted RBP9.22□□□□□ -0.93
SPTLC2-201ENST00000216484 CNBPP62633 177 aaKnown RBP9.22□□□□□ -0.93
SPTLC2-201ENST00000216484 FLNAP21333 2647 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 181.1 ms