RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Rbfox2Q8BP71 449 aaKnown RBP6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Pgam5Q8BX10 288 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Neil3Q8K203 606 aaKnown RBP6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Chac2Q9CQG1 178 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Tspo2Q9CRZ8 162 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Bean1Q9EQG5 255 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Rcl1Q9JJT0 373 aaKnown RBP6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 ApomQ9Z1R3 190 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Esp23A8R0V5 104 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gm7138L7N2C3 230 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 GzmfP08883 248 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Phxr2P15972 65 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gm20816Q5FWD4 227 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Fam206aQ80ZQ9 193 aaKnown RBP6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Ly6g5bQ8K1T4 194 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Anapc13Q8R034 74 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Mrpl20Q9CQL4 149 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Bpifa5Q9CQX3 270 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Mrpl30Q9D7N6 160 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gm3238W4VSP7 230 aa6.51□□□□□ -1.37
Trim39-205ENSMUST00000173369 Ighv6-4A0A0A6YX19 119 aa6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Trbv12-2A0A0B4J1H1 124 aa6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gm17677B3GLJ5 116 aa6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 MsmbO08540 113 aa6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Cdk2P97377 346 aa6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Ang6Q5GAN0 147 aa6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Olfr1178Q7TR20 323 aa6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Fam78bQ8BQN5 261 aa6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Q8R092 253 aa6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Ctnnbip1Q9JJN6 81 aa6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Osr1Q9WVG7 266 aa6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gm20821J3QPJ2 227 aa6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Adcyap1O70176 175 aa6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Mfge8P21956 463 aaKnown RBP6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gm10447Q3UQ92 135 aa6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Try10Q792Z1 246 aaKnown RBP6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Nup35Q8R4R6 325 aa6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Rbpms2Q8VC52 206 aaKnown RBP6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Tmem97Q8VD00 176 aa6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Mfap4Q9D1H9 257 aa6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Trem3Q9JKE1 183 aa6.5□□□□□ -1.37
Trim39-205ENSMUST00000173369 Cyb561d1A2AE42 229 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Krtap24-1G3X9A2 248 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Foxh1O88621 401 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Hbb-bh0P04443 147 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Myod1P10085 318 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Ly6gP35461 111 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Cox7a2P48771 83 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gng4P50153 75 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Samd10Q7TST3 202 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Rnase2aQ8K196 155 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Olfr968Q8VFN4 314 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Olfr1242Q8VGM6 306 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Rnf126Q91YL2 313 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Tmem189Q99LQ7 271 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Cd5lQ9QWK4 352 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Bhlha15Q9QYC3 197 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Ovol1Q9WTJ2 267 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gm12790B1AUV6 201 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Olfr317Q5NCD6 327 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Olfr965Q7TRA7 312 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Q8BTC1 67 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Zfp119aQ9JIC0 545 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Muc6Q80T03 2850 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gm10036E9PYL9 178 aaKnown RBP6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gm10020E9QAZ2 204 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 P06335 190 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 PmchP56942 165 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 G0s2Q61585 103 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Mus81Q91ZJ0 551 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Ube2tQ9CQ37 204 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Zfand6Q9DCH6 223 aa6.49□□□□□ -1.37
Trim39-205ENSMUST00000173369 Trav6d-3A0A075B6B3 112 aa6.48□□□□□ -1.37
Trim39-205ENSMUST00000173369 Mef2bO55087 349 aa6.48□□□□□ -1.37
Trim39-205ENSMUST00000173369 Nkx2-1P50220 372 aa6.48□□□□□ -1.37
Trim39-205ENSMUST00000173369 Tcl1b2P56841 117 aa6.48□□□□□ -1.37
Trim39-205ENSMUST00000173369 Trav6-3Q5R1E6 112 aa6.48□□□□□ -1.37
Trim39-205ENSMUST00000173369 Olfr1370Q8VFG4 316 aa6.48□□□□□ -1.37
Trim39-205ENSMUST00000173369 Rnase4Q9JJH1 148 aa6.48□□□□□ -1.37
Trim39-205ENSMUST00000173369 H60bB1B212 251 aa6.48□□□□□ -1.37
Trim39-205ENSMUST00000173369 Olfr196E9PYP4 309 aa6.48□□□□□ -1.37
Trim39-205ENSMUST00000173369 Olfr905L7N1X5 310 aa6.48□□□□□ -1.37
Trim39-205ENSMUST00000173369 P01727 129 aa6.48□□□□□ -1.37
Trim39-205ENSMUST00000173369 Cstl1Q80Y72 140 aa6.48□□□□□ -1.37
Trim39-205ENSMUST00000173369 Tmem91Q8C581 172 aa6.48□□□□□ -1.37
Trim39-205ENSMUST00000173369 Ndfip1Q8R0W6 221 aa6.48□□□□□ -1.37
Trim39-205ENSMUST00000173369 Tm2d1Q99MB3 208 aa6.48□□□□□ -1.37
Trim39-205ENSMUST00000173369 Hrct1Q9D6B9 109 aa6.48□□□□□ -1.37
Trim39-205ENSMUST00000173369 CklfQ9DAS1 152 aa6.48□□□□□ -1.37
Trim39-205ENSMUST00000173369 Tmprss2Q9JIQ8 490 aa6.48□□□□□ -1.37
Trim39-205ENSMUST00000173369 Pxmp4Q9JJW0 212 aa6.48□□□□□ -1.37
Trim39-205ENSMUST00000173369 Ighv5-6A0A075B5Q0 117 aa6.47□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gm26661M0QWV4 156 aa6.47□□□□□ -1.37
Trim39-205ENSMUST00000173369 P06323 132 aa6.47□□□□□ -1.37
Trim39-205ENSMUST00000173369 P06330 118 aa6.47□□□□□ -1.37
Trim39-205ENSMUST00000173369 Smim9Q3V0X1 137 aa6.47□□□□□ -1.37
Trim39-205ENSMUST00000173369 Olfr477Q8VGI6 310 aa6.47□□□□□ -1.37
Trim39-205ENSMUST00000173369 Olfr1228Q8VGM9 323 aa6.47□□□□□ -1.37
Trim39-205ENSMUST00000173369 Ear10Q923L6 156 aa6.47□□□□□ -1.37
Trim39-205ENSMUST00000173369 Fbxo25Q9D2Y6 357 aa6.47□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 92 ms