RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 SLC25A34Q6PIV7 304 aa6.06□□□□□ -1.44
PHGDH-228ENST00000641847 SCGB1D4Q6XE38 83 aa6.06□□□□□ -1.44
PHGDH-228ENST00000641847 FAT3Q8TDW7 4589 aa6.06□□□□□ -1.44
PHGDH-228ENST00000641847 DLEU1O43261 78 aa6.05□□□□□ -1.44
PHGDH-228ENST00000641847 SVIPQ8NHG7 77 aa6.05□□□□□ -1.44
PHGDH-228ENST00000641847 PRO1933Q9H354 126 aa6.05□□□□□ -1.44
PHGDH-228ENST00000641847 LRP2P98164 4655 aa6.05□□□□□ -1.44
PHGDH-228ENST00000641847 A0A0U1RRA0 63 aa6.04□□□□□ -1.44
PHGDH-228ENST00000641847 SMIM13P0DJ93 91 aa6.04□□□□□ -1.44
PHGDH-228ENST00000641847 PFN2P35080 140 aa6.04□□□□□ -1.44
PHGDH-228ENST00000641847 UQCR10Q9UDW1 63 aa6.04□□□□□ -1.44
PHGDH-228ENST00000641847 LOC107984640A0A0U1RRK4 108 aa6.03□□□□□ -1.44
PHGDH-228ENST00000641847 LINC00587B1AMM8 73 aa6.03□□□□□ -1.44
PHGDH-228ENST00000641847 NDUFC2-KCTD14E9PQ53 114 aa6.03□□□□□ -1.44
PHGDH-228ENST00000641847 TIMM17BO60830 172 aa6.03□□□□□ -1.44
PHGDH-228ENST00000641847 LINC00158P58513 81 aa6.03□□□□□ -1.44
PHGDH-228ENST00000641847 RPL18AQ02543 176 aaKnown RBP6.03□□□□□ -1.44
PHGDH-228ENST00000641847 CIRBPQ14011 172 aaKnown RBP6.03□□□□□ -1.44
PHGDH-228ENST00000641847 COX17Q14061 63 aa6.03□□□□□ -1.44
PHGDH-228ENST00000641847 LINC01620Q4KN68 170 aa6.03□□□□□ -1.44
PHGDH-228ENST00000641847 C9orf163Q8N9P6 203 aa6.03□□□□□ -1.44
PHGDH-228ENST00000641847 TMEM238C9JI98 176 aa6.02□□□□□ -1.45
PHGDH-228ENST00000641847 TSTD3H0UI37 97 aa6.02□□□□□ -1.45
PHGDH-228ENST00000641847 TLX1NBP0CAT3 122 aa6.02□□□□□ -1.45
PHGDH-228ENST00000641847 C2orf91Q6ZV80 131 aa6.02□□□□□ -1.45
PHGDH-228ENST00000641847 DAND5Q8N907 189 aa6.02□□□□□ -1.45
PHGDH-228ENST00000641847 LITAFQ99732 161 aa6.02□□□□□ -1.45
PHGDH-228ENST00000641847 PKIGQ9Y2B9 76 aa6.02□□□□□ -1.45
PHGDH-228ENST00000641847 PKHD1L1Q86WI1 4243 aa6.01□□□□□ -1.45
PHGDH-228ENST00000641847 GAGE2BQ13066 116 aa6.01□□□□□ -1.45
PHGDH-228ENST00000641847 GAGE2EQ4V326 116 aa6.01□□□□□ -1.45
PHGDH-228ENST00000641847 ADAMTSL4-AS1Q5T5F5 129 aa6.01□□□□□ -1.45
PHGDH-228ENST00000641847 Q6ZRP5 223 aa6.01□□□□□ -1.45
PHGDH-228ENST00000641847 MIR7-3HGQ8N6C7 128 aa6.01□□□□□ -1.45
PHGDH-228ENST00000641847 MIEN1Q9BRT3 115 aa6.01□□□□□ -1.45
PHGDH-228ENST00000641847 GAGE2DQ9UEU5 116 aa6.01□□□□□ -1.45
PHGDH-228ENST00000641847 HNRNPA3P51991 378 aaKnown RBP6□□□□□ -1.45
PHGDH-228ENST00000641847 NPC2P61916 151 aa6□□□□□ -1.45
PHGDH-228ENST00000641847 SPANXDQ9BXN6 97 aa6□□□□□ -1.45
PHGDH-228ENST00000641847 SND1-IT1Q9HBX3 110 aa6□□□□□ -1.45
PHGDH-228ENST00000641847 SPANXCQ9NY87 97 aa6□□□□□ -1.45
PHGDH-228ENST00000641847 HIGD1BQ9P298 99 aa6□□□□□ -1.45
PHGDH-228ENST00000641847 A0A096LNI7 61 aa5.99□□□□□ -1.45
PHGDH-228ENST00000641847 IGKV2-24A0A0C4DH68 120 aa5.99□□□□□ -1.45
PHGDH-228ENST00000641847 PTTG1IPP53801 180 aa5.99□□□□□ -1.45
PHGDH-228ENST00000641847 SDIM1Q6ZPB5 146 aa5.99□□□□□ -1.45
PHGDH-228ENST00000641847 XAGE1AQ9HD64 81 aa5.99□□□□□ -1.45
PHGDH-228ENST00000641847 SPANXB1Q9NS25 103 aaPredicted RBP5.99□□□□□ -1.45
PHGDH-228ENST00000641847 CHTF8P0CG12 524 aa5.98□□□□□ -1.45
PHGDH-228ENST00000641847 SRSF9Q13242 221 aaKnown RBP eCLIP5.98□□□□□ -1.45
PHGDH-228ENST00000641847 HIST1H4GQ99525 98 aa5.98□□□□□ -1.45
PHGDH-228ENST00000641847 C9orf129Q5T035 196 aaKnown RBP5.97□□□□□ -1.45
PHGDH-228ENST00000641847 SOSTDC1Q6X4U4 206 aa5.97□□□□□ -1.45
PHGDH-228ENST00000641847 Q6ZVH6 145 aa5.97□□□□□ -1.45
PHGDH-228ENST00000641847 LINC00308Q8TCZ7 52 aa5.97□□□□□ -1.45
PHGDH-228ENST00000641847 PANO1I0J062 215 aa5.96□□□□□ -1.46
PHGDH-228ENST00000641847 HSD52Q0P140 79 aa5.96□□□□□ -1.46
PHGDH-228ENST00000641847 MUSTN1Q8IVN3 82 aa5.96□□□□□ -1.46
PHGDH-228ENST00000641847 SPACA4Q8TDM5 124 aa5.96□□□□□ -1.46
PHGDH-228ENST00000641847 COPS9Q8WXC6 57 aa5.96□□□□□ -1.46
PHGDH-228ENST00000641847 FAM30AQ9NZY2 134 aa5.96□□□□□ -1.46
PHGDH-228ENST00000641847 LINC00474Q9P2X8 69 aa5.96□□□□□ -1.46
PHGDH-228ENST00000641847 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.96□□□□□ -1.46
PHGDH-228ENST00000641847 LOC107984156A0A0G2JMH3 177 aa5.95□□□□□ -1.46
PHGDH-228ENST00000641847 IFITM1P13164 125 aa5.95□□□□□ -1.46
PHGDH-228ENST00000641847 DDTP30046 118 aa5.95□□□□□ -1.46
PHGDH-228ENST00000641847 TAL2Q16559 108 aa5.95□□□□□ -1.46
PHGDH-228ENST00000641847 ARL17AQ8IVW1 177 aa5.95□□□□□ -1.46
PHGDH-228ENST00000641847 FAM168BA1KXE4 195 aa5.94□□□□□ -1.46
PHGDH-228ENST00000641847 CTAG1AP78358 180 aa5.94□□□□□ -1.46
PHGDH-228ENST00000641847 FAM19A5Q7Z5A7 132 aaPredicted RBP5.94□□□□□ -1.46
PHGDH-228ENST00000641847 CEND1Q8N111 149 aa5.94□□□□□ -1.46
PHGDH-228ENST00000641847 Q8NDZ9 215 aa5.94□□□□□ -1.46
PHGDH-228ENST00000641847 A0A1W2PNN7 141 aa5.93□□□□□ -1.46
PHGDH-228ENST00000641847 RPL24P83731 157 aaKnown RBP5.93□□□□□ -1.46
PHGDH-228ENST00000641847 Q6ZSA8 131 aa5.93□□□□□ -1.46
PHGDH-228ENST00000641847 PPDPFQ9H3Y8 114 aa5.93□□□□□ -1.46
PHGDH-228ENST00000641847 A4D1N5 150 aa5.92□□□□□ -1.46
PHGDH-228ENST00000641847 PCP4L1A6NKN8 68 aa5.92□□□□□ -1.46
PHGDH-228ENST00000641847 NCR3O14931 201 aa5.92□□□□□ -1.46
PHGDH-228ENST00000641847 VPREB1P12018 145 aa5.92□□□□□ -1.46
PHGDH-228ENST00000641847 FXYD2P54710 66 aa5.92□□□□□ -1.46
PHGDH-228ENST00000641847 DPH3Q96FX2 82 aa5.92□□□□□ -1.46
PHGDH-228ENST00000641847 TNXBP22105 4242 aa5.91□□□□□ -1.46
PHGDH-228ENST00000641847 IGLV5-37A0A075B6J1 123 aa5.91□□□□□ -1.46
PHGDH-228ENST00000641847 M0QXV9 152 aa5.91□□□□□ -1.46
PHGDH-228ENST00000641847 NDUFC2O95298 119 aa5.91□□□□□ -1.46
PHGDH-228ENST00000641847 KRTAP7-1Q8IUC3 87 aa5.91□□□□□ -1.46
PHGDH-228ENST00000641847 NKAPP1Q8N9T2 125 aa5.91□□□□□ -1.46
PHGDH-228ENST00000641847 A0A087WYN8 130 aa5.9□□□□□ -1.46
PHGDH-228ENST00000641847 M0R143 59 aa5.9□□□□□ -1.46
PHGDH-228ENST00000641847 HINT1P49773 126 aaPredicted RBP5.9□□□□□ -1.46
PHGDH-228ENST00000641847 PRR3P79522 188 aaKnown RBP5.9□□□□□ -1.46
PHGDH-228ENST00000641847 BVES-AS1Q5T3Y7 98 aa5.9□□□□□ -1.46
PHGDH-228ENST00000641847 SCXQ7RTU7 201 aa5.9□□□□□ -1.46
PHGDH-228ENST00000641847 PLAC8Q9NZF1 115 aa5.9□□□□□ -1.46
PHGDH-228ENST00000641847 IGKV2-28A0A075B6P5 120 aa5.89□□□□□ -1.47
PHGDH-228ENST00000641847 IGKV2D-28P01615 120 aa5.89□□□□□ -1.47
PHGDH-228ENST00000641847 C7orf33Q8WU49 177 aa5.89□□□□□ -1.47
PHGDH-228ENST00000641847 C22orf24Q9Y442 160 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms