RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 LINC00158P58513 81 aa10.53□□□□□ -0.72
PHGDH-227ENST00000641811 MAP1LC3CQ9BXW4 147 aa10.53□□□□□ -0.72
PHGDH-227ENST00000641811 TSPEAR-AS2P59090 65 aa10.52□□□□□ -0.73
PHGDH-227ENST00000641811 NKAPP1Q8N9T2 125 aa10.52□□□□□ -0.73
PHGDH-227ENST00000641811 Q8NDZ9 215 aa10.52□□□□□ -0.73
PHGDH-227ENST00000641811 IGKCP01834 107 aa10.51□□□□□ -0.73
PHGDH-227ENST00000641811 DIRC1Q969H9 104 aa10.51□□□□□ -0.73
PHGDH-227ENST00000641811 NDUFA12Q9UI09 145 aa10.51□□□□□ -0.73
PHGDH-227ENST00000641811 SMIM13P0DJ93 91 aa10.5□□□□□ -0.73
PHGDH-227ENST00000641811 VPREB1P12018 145 aa10.5□□□□□ -0.73
PHGDH-227ENST00000641811 H0Y9J4 135 aa10.49□□□□□ -0.73
PHGDH-227ENST00000641811 LEPROTO15243 131 aa10.49□□□□□ -0.73
PHGDH-227ENST00000641811 SYS1-DBNDD2H3BUS1 97 aa10.48□□□□□ -0.73
PHGDH-227ENST00000641811 KRTAP10-8P60410 259 aa10.48□□□□□ -0.73
PHGDH-227ENST00000641811 MEIG1Q5JSS6 88 aa10.48□□□□□ -0.73
PHGDH-227ENST00000641811 TMA7Q9Y2S6 64 aaKnown RBP10.48□□□□□ -0.73
PHGDH-227ENST00000641811 MYMXA0A1B0GTQ4 84 aa10.47□□□□□ -0.73
PHGDH-227ENST00000641811 S100A6P06703 90 aa10.47□□□□□ -0.73
PHGDH-227ENST00000641811 HERV-K104P63124 156 aa10.47□□□□□ -0.73
PHGDH-227ENST00000641811 PLEKHB2Q96CS7 222 aa10.47□□□□□ -0.73
PHGDH-227ENST00000641811 IGKV2-28A0A075B6P5 120 aa10.46□□□□□ -0.73
PHGDH-227ENST00000641811 J3QQQ9 107 aa10.46□□□□□ -0.73
PHGDH-227ENST00000641811 IGKV2D-28P01615 120 aa10.46□□□□□ -0.73
PHGDH-227ENST00000641811 HERVK_113P61574 105 aa10.46□□□□□ -0.73
PHGDH-227ENST00000641811 COA6Q5JTJ3 125 aaKnown RBP10.46□□□□□ -0.73
PHGDH-227ENST00000641811 ZNF861PO60384 105 aa10.45□□□□□ -0.74
PHGDH-227ENST00000641811 BCE1O60756 84 aa10.45□□□□□ -0.74
PHGDH-227ENST00000641811 RPL24P83731 157 aaKnown RBP10.45□□□□□ -0.74
PHGDH-227ENST00000641811 MIR7-3HGQ8N6C7 128 aa10.45□□□□□ -0.74
PHGDH-227ENST00000641811 TNXBP22105 4242 aa10.44□□□□□ -0.74
PHGDH-227ENST00000641811 IGLV1-50A0A075B6I6 118 aa10.43□□□□□ -0.74
PHGDH-227ENST00000641811 C3orf79P0CE67 100 aa10.43□□□□□ -0.74
PHGDH-227ENST00000641811 LINC01545Q5VT33 79 aa10.43□□□□□ -0.74
PHGDH-227ENST00000641811 KRTAP1-4P0C5Y4 121 aa10.42□□□□□ -0.74
PHGDH-227ENST00000641811 LGALS3P17931 250 aaKnown RBP10.42□□□□□ -0.74
PHGDH-227ENST00000641811 PET117Q6UWS5 81 aa10.42□□□□□ -0.74
PHGDH-227ENST00000641811 PRR26Q8N8Z3 221 aa10.42□□□□□ -0.74
PHGDH-227ENST00000641811 TMEM238C9JI98 176 aa10.41□□□□□ -0.74
PHGDH-227ENST00000641811 BOD1L2Q8IYS8 172 aa10.41□□□□□ -0.74
PHGDH-227ENST00000641811 DAND5Q8N907 189 aa10.41□□□□□ -0.74
PHGDH-227ENST00000641811 LINC00587B1AMM8 73 aa10.4□□□□□ -0.74
PHGDH-227ENST00000641811 RPL28P46779 137 aaKnown RBP10.4□□□□□ -0.74
PHGDH-227ENST00000641811 KRTDAPP60985 99 aa10.4□□□□□ -0.74
PHGDH-227ENST00000641811 C5orf52A6NGY3 159 aa10.39□□□□□ -0.75
PHGDH-227ENST00000641811 E9PLD3 99 aa10.39□□□□□ -0.75
PHGDH-227ENST00000641811 NMUP48645 174 aa10.39□□□□□ -0.75
PHGDH-227ENST00000641811 M0R378 163 aa10.38□□□□□ -0.75
PHGDH-227ENST00000641811 UBE2AP49459 152 aa10.38□□□□□ -0.75
PHGDH-227ENST00000641811 SNRPEP62304 92 aaKnown RBP10.38□□□□□ -0.75
PHGDH-227ENST00000641811 KRTAP13-1Q8IUC0 172 aa10.38□□□□□ -0.75
PHGDH-227ENST00000641811 TMEM126AQ9H061 195 aa10.38□□□□□ -0.75
PHGDH-227ENST00000641811 HMCN2Q8NDA2 5059 aa10.37□□□□□ -0.75
PHGDH-227ENST00000641811 NCR3O14931 201 aa10.37□□□□□ -0.75
PHGDH-227ENST00000641811 A0A0J9YXY3 114 aa10.35□□□□□ -0.75
PHGDH-227ENST00000641811 S100A2P29034 98 aa10.35□□□□□ -0.75
PHGDH-227ENST00000641811 PRLHP81277 87 aa10.35□□□□□ -0.75
PHGDH-227ENST00000641811 FAM19A1Q7Z5A9 133 aa10.35□□□□□ -0.75
PHGDH-227ENST00000641811 IGKV2D-26A0A0A0MRZ7 120 aa10.34□□□□□ -0.75
PHGDH-227ENST00000641811 ADAMTSL4-AS1Q5T5F5 129 aa10.34□□□□□ -0.75
PHGDH-227ENST00000641811 HIST3H2BBQ8N257 126 aa10.33□□□□□ -0.76
PHGDH-227ENST00000641811 LOC107984156A0A0G2JMH3 177 aa10.32□□□□□ -0.76
PHGDH-227ENST00000641811 EIF4EBP3O60516 100 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-227ENST00000641811 ARL17AQ8IVW1 177 aa10.32□□□□□ -0.76
PHGDH-227ENST00000641811 TTTY13Q9BZ97 58 aa10.32□□□□□ -0.76
PHGDH-227ENST00000641811 NPC2P61916 151 aa10.31□□□□□ -0.76
PHGDH-227ENST00000641811 ATOH7Q8N100 152 aa10.31□□□□□ -0.76
PHGDH-227ENST00000641811 ANAPC11Q9NYG5 84 aa10.31□□□□□ -0.76
PHGDH-227ENST00000641811 TRBV10-3A0A0K0K1G6 114 aa10.3□□□□□ -0.76
PHGDH-227ENST00000641811 SOSTDC1Q6X4U4 206 aa10.3□□□□□ -0.76
PHGDH-227ENST00000641811 C20orf202A1L168 122 aa10.29□□□□□ -0.76
PHGDH-227ENST00000641811 MIEN1Q9BRT3 115 aa10.29□□□□□ -0.76
PHGDH-227ENST00000641811 A0A087X002 238 aa10.28□□□□□ -0.76
PHGDH-227ENST00000641811 ZNF815PA8K554 130 aa10.28□□□□□ -0.76
PHGDH-227ENST00000641811 LITAFQ99732 161 aa10.28□□□□□ -0.76
PHGDH-227ENST00000641811 HIST1H2BLQ99880 126 aa10.28□□□□□ -0.76
PHGDH-227ENST00000641811 PRYO14603 147 aa10.27□□□□□ -0.77
PHGDH-227ENST00000641811 RPL13AP40429 203 aaKnown RBP10.27□□□□□ -0.77
PHGDH-227ENST00000641811 ANKRD39Q53RE8 183 aa10.27□□□□□ -0.77
PHGDH-227ENST00000641811 KCNQ1DNQ9H478 68 aa10.27□□□□□ -0.77
PHGDH-227ENST00000641811 HIGD2AQ9BW72 106 aa10.26□□□□□ -0.77
PHGDH-227ENST00000641811 TRBV10-2A0A0K0K1G8 114 aa10.25□□□□□ -0.77
PHGDH-227ENST00000641811 SPANXB1Q9NS25 103 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-227ENST00000641811 NDUFC2O95298 119 aa10.24□□□□□ -0.77
PHGDH-227ENST00000641811 CRYGAP11844 174 aa10.24□□□□□ -0.77
PHGDH-227ENST00000641811 DDTP30046 118 aa10.24□□□□□ -0.77
PHGDH-227ENST00000641811 SPRR1AP35321 89 aa10.24□□□□□ -0.77
PHGDH-227ENST00000641811 LOC105371267A0A1B0GV96 52 aa10.23□□□□□ -0.77
PHGDH-227ENST00000641811 KRTAP4-16G5E9R7 235 aaPredicted RBP10.23□□□□□ -0.77
PHGDH-227ENST00000641811 TIMM17BO60830 172 aa10.23□□□□□ -0.77
PHGDH-227ENST00000641811 LINC00308Q8TCZ7 52 aa10.23□□□□□ -0.77
PHGDH-227ENST00000641811 ETDCA0A1B0GVM5 59 aa10.22□□□□□ -0.77
PHGDH-227ENST00000641811 KRTAP13-2Q52LG2 175 aa10.22□□□□□ -0.77
PHGDH-227ENST00000641811 LINC00337Q8N6G1 96 aa10.22□□□□□ -0.77
PHGDH-227ENST00000641811 S100A7L2Q5SY68 101 aa10.21□□□□□ -0.77
PHGDH-227ENST00000641811 IGLV6-57P01721 117 aa10.2□□□□□ -0.78
PHGDH-227ENST00000641811 PCP2Q8IVA1 136 aa10.2□□□□□ -0.78
PHGDH-227ENST00000641811 TYMSOSQ8TAI1 123 aa10.2□□□□□ -0.78
PHGDH-227ENST00000641811 AKR1D1P51857 326 aa10.19□□□□□ -0.78
PHGDH-227ENST00000641811 S100A12P80511 92 aa10.19□□□□□ -0.78
PHGDH-227ENST00000641811 FAM229BQ4G0N7 80 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms