RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 DEFB136Q30KP8 78 aa2.95□□□□□ -1.94
SCN3A-209ENST00000639244 CSAG1Q6PB30 78 aa2.94□□□□□ -1.94
SCN3A-209ENST00000639244 DNAH12Q6ZR08 3092 aa2.94□□□□□ -1.94
SCN3A-209ENST00000639244 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.94□□□□□ -1.94
SCN3A-209ENST00000639244 IGKV2-29A2NJV5 120 aaPredicted RBP2.94□□□□□ -1.94
SCN3A-209ENST00000639244 A8MU10 97 aa2.94□□□□□ -1.94
SCN3A-209ENST00000639244 B4DSR2 109 aa2.94□□□□□ -1.94
SCN3A-209ENST00000639244 H3BPC8 53 aa2.94□□□□□ -1.94
SCN3A-209ENST00000639244 ZNF580Q9UK33 172 aa2.94□□□□□ -1.94
SCN3A-209ENST00000639244 A0A087WYN8 130 aa2.94□□□□□ -1.94
SCN3A-209ENST00000639244 HIVEP1P15822 2718 aa2.94□□□□□ -1.94
SCN3A-209ENST00000639244 CGB3P0DN86 165 aa2.93□□□□□ -1.94
SCN3A-209ENST00000639244 CGB7P0DN87 165 aa2.93□□□□□ -1.94
SCN3A-209ENST00000639244 DEFB1P60022 68 aa2.93□□□□□ -1.94
SCN3A-209ENST00000639244 CHCHD7Q9BUK0 85 aa2.93□□□□□ -1.94
SCN3A-209ENST00000639244 RPL39LQ96EH5 51 aaKnown RBP2.93□□□□□ -1.94
SCN3A-209ENST00000639244 RPL39P62891 51 aaKnown RBP2.93□□□□□ -1.94
SCN3A-209ENST00000639244 DMAC1Q96GE9 116 aa2.93□□□□□ -1.94
SCN3A-209ENST00000639244 CHD7Q9P2D1 2997 aa2.93□□□□□ -1.94
SCN3A-209ENST00000639244 IGHV7-4-1A0A0J9YVY3 117 aa2.93□□□□□ -1.94
SCN3A-209ENST00000639244 LY6G6DO95868 133 aa2.93□□□□□ -1.94
SCN3A-209ENST00000639244 TSHBP01222 138 aa2.93□□□□□ -1.94
SCN3A-209ENST00000639244 Q8NAQ8 132 aa2.93□□□□□ -1.94
SCN3A-209ENST00000639244 C17orf58Q2M2W7 97 aa2.93□□□□□ -1.94
SCN3A-209ENST00000639244 Q6ZQT0 140 aa2.93□□□□□ -1.94
SCN3A-209ENST00000639244 CSNK1G2-AS1Q8NCQ2 148 aa2.93□□□□□ -1.94
SCN3A-209ENST00000639244 FLNCQ14315 2725 aa2.93□□□□□ -1.94
SCN3A-209ENST00000639244 WT1-ASQ06250 92 aa2.92□□□□□ -1.94
SCN3A-209ENST00000639244 IGKV1-17P01599 117 aa2.92□□□□□ -1.94
SCN3A-209ENST00000639244 UNC79Q9P2D8 2635 aa2.92□□□□□ -1.94
SCN3A-209ENST00000639244 UQCR11O14957 56 aa2.92□□□□□ -1.94
SCN3A-209ENST00000639244 CAMK2N1Q7Z7J9 78 aa2.92□□□□□ -1.94
SCN3A-209ENST00000639244 GAS8-AS1O95177 125 aa2.92□□□□□ -1.94
SCN3A-209ENST00000639244 IGHV4OR15-8A0A075B7B6 117 aa2.92□□□□□ -1.94
SCN3A-209ENST00000639244 A0A087WW49 117 aa2.92□□□□□ -1.94
SCN3A-209ENST00000639244 CRIP1P50238 77 aa2.92□□□□□ -1.94
SCN3A-209ENST00000639244 Q6ZTI0 123 aa2.92□□□□□ -1.94
SCN3A-209ENST00000639244 SMIM29Q86T20 159 aa2.92□□□□□ -1.94
SCN3A-209ENST00000639244 C5orf42Q9H799 3197 aa2.92□□□□□ -1.94
SCN3A-209ENST00000639244 RNASE3P12724 160 aaKnown RBP2.91□□□□□ -1.94
SCN3A-209ENST00000639244 NOP10Q9NPE3 64 aaKnown RBP2.91□□□□□ -1.94
SCN3A-209ENST00000639244 DEFB4AO15263 64 aa2.91□□□□□ -1.94
SCN3A-209ENST00000639244 ADM2Q7Z4H4 148 aa2.91□□□□□ -1.94
SCN3A-209ENST00000639244 ANGP03950 147 aaKnown RBP2.91□□□□□ -1.94
SCN3A-209ENST00000639244 IGLV11-55A0A075B6I3 123 aa2.91□□□□□ -1.94
SCN3A-209ENST00000639244 C10orf142B7Z368 130 aa2.91□□□□□ -1.94
SCN3A-209ENST00000639244 F8W735 103 aaPredicted RBP2.9□□□□□ -1.94
SCN3A-209ENST00000639244 CELSR2Q9HCU4 2923 aa2.9□□□□□ -1.94
SCN3A-209ENST00000639244 IGLV8-61A0A075B6I0 122 aa2.9□□□□□ -1.94
SCN3A-209ENST00000639244 SMIM11BQ8TCY0 68 aa2.9□□□□□ -1.94
SCN3A-209ENST00000639244 ZNF575Q86XF7 245 aa2.9□□□□□ -1.95
SCN3A-209ENST00000639244 FAM215AQ9Y5M1 114 aa2.9□□□□□ -1.95
SCN3A-209ENST00000639244 IGLV5-37A0A075B6J1 123 aa2.9□□□□□ -1.95
SCN3A-209ENST00000639244 BRWD1-AS2P59051 145 aa2.89□□□□□ -1.95
SCN3A-209ENST00000639244 COA5Q86WW8 74 aa2.89□□□□□ -1.95
SCN3A-209ENST00000639244 LINC01558Q9Y6Z2 57 aa2.89□□□□□ -1.95
SCN3A-209ENST00000639244 FAM104AQ969W3 186 aa2.89□□□□□ -1.95
SCN3A-209ENST00000639244 H3BRN7 92 aa2.89□□□□□ -1.95
SCN3A-209ENST00000639244 MUC7Q8TAX7 377 aa2.89□□□□□ -1.95
SCN3A-209ENST00000639244 TNRC18O15417 2968 aaPredicted RBP2.89□□□□□ -1.95
SCN3A-209ENST00000639244 IGLV1-50A0A075B6I6 118 aa2.89□□□□□ -1.95
SCN3A-209ENST00000639244 TRBV6-4A0A1B0GX49 114 aa2.89□□□□□ -1.95
SCN3A-209ENST00000639244 SLURP1P55000 103 aa2.89□□□□□ -1.95
SCN3A-209ENST00000639244 IGKV2D-24A0A075B6R9 120 aa2.88□□□□□ -1.95
SCN3A-209ENST00000639244 IGLV4-3A0A075B6K6 122 aa2.88□□□□□ -1.95
SCN3A-209ENST00000639244 SLPIP03973 132 aa2.88□□□□□ -1.95
SCN3A-209ENST00000639244 CYSRT1A8MQ03 144 aa2.88□□□□□ -1.95
SCN3A-209ENST00000639244 FAM229AH3BQW9 127 aa2.88□□□□□ -1.95
SCN3A-209ENST00000639244 LCE6AA0A183 80 aa2.88□□□□□ -1.95
SCN3A-209ENST00000639244 RTL8CO15255 209 aa2.88□□□□□ -1.95
SCN3A-209ENST00000639244 POLR2KP53803 58 aaKnown RBP2.88□□□□□ -1.95
SCN3A-209ENST00000639244 CASC10Q5T4H9 136 aa2.88□□□□□ -1.95
SCN3A-209ENST00000639244 USMG5Q96IX5 58 aa2.88□□□□□ -1.95
SCN3A-209ENST00000639244 IGHV4-30-2A0A087WSY4 118 aa2.88□□□□□ -1.95
SCN3A-209ENST00000639244 MINOS1Q5TGZ0 78 aa2.88□□□□□ -1.95
SCN3A-209ENST00000639244 MINOS1-NBL1R4GNA1 71 aa2.88□□□□□ -1.95
SCN3A-209ENST00000639244 IGKV1D-37A0A075B6S9 117 aa2.87□□□□□ -1.95
SCN3A-209ENST00000639244 IGKV4-1P06312 121 aa2.87□□□□□ -1.95
SCN3A-209ENST00000639244 LINC00167Q96N53 147 aa2.87□□□□□ -1.95
SCN3A-209ENST00000639244 MAST4O15021 2626 aa2.87□□□□□ -1.95
SCN3A-209ENST00000639244 PRAC2D3DTV9 90 aa2.87□□□□□ -1.95
SCN3A-209ENST00000639244 KPRPQ5T749 579 aaPredicted RBP2.87□□□□□ -1.95
SCN3A-209ENST00000639244 C20orf166-AS1Q96NR2 134 aa2.87□□□□□ -1.95
SCN3A-209ENST00000639244 DHRS4-AS1Q9P1J3 65 aa2.87□□□□□ -1.95
SCN3A-209ENST00000639244 TACC2O95359 2948 aa2.87□□□□□ -1.95
SCN3A-209ENST00000639244 COX7BP24311 80 aa2.87□□□□□ -1.95
SCN3A-209ENST00000639244 Q8NDZ9 215 aa2.87□□□□□ -1.95
SCN3A-209ENST00000639244 KCNQ1DNQ9H478 68 aa2.87□□□□□ -1.95
SCN3A-209ENST00000639244 ZCCHC13Q8WW36 166 aaKnown RBP2.87□□□□□ -1.95
SCN3A-209ENST00000639244 LINC00483Q53H64 154 aa2.86□□□□□ -1.95
SCN3A-209ENST00000639244 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.86□□□□□ -1.95
SCN3A-209ENST00000639244 COX17Q14061 63 aa2.86□□□□□ -1.95
SCN3A-209ENST00000639244 LINC01006Q8NI28 216 aa2.86□□□□□ -1.95
SCN3A-209ENST00000639244 A0A0J9YWU9 116 aa2.86□□□□□ -1.95
SCN3A-209ENST00000639244 U3KQA8 63 aa2.86□□□□□ -1.95
SCN3A-209ENST00000639244 REV3LO60673 3130 aa2.86□□□□□ -1.95
SCN3A-209ENST00000639244 IGLV5-39A0A0G2JS06 123 aa2.86□□□□□ -1.95
SCN3A-209ENST00000639244 DAZAP2Q15038 168 aaPredicted RBP2.86□□□□□ -1.95
SCN3A-209ENST00000639244 IGLV5-52A0A0A0MRZ9 124 aa2.86□□□□□ -1.95
SCN3A-209ENST00000639244 C1orf137Q5JT78 98 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms