RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 ESRGQ1W209 222 aa9.95□□□□□ -0.82
SCARB2-208ENST00000638372 SOSTDC1Q6X4U4 206 aa9.95□□□□□ -0.82
SCARB2-208ENST00000638372 COX7CP15954 63 aa9.95□□□□□ -0.82
SCARB2-208ENST00000638372 PRR4Q16378 134 aa9.95□□□□□ -0.82
SCARB2-208ENST00000638372 STAB1Q9NY15 2570 aa9.94□□□□□ -0.82
SCARB2-208ENST00000638372 C2orf48Q96LS8 159 aa9.94□□□□□ -0.82
SCARB2-208ENST00000638372 NUPR2A6NF83 97 aa9.93□□□□□ -0.82
SCARB2-208ENST00000638372 IGLV5-45A0A087WSX0 123 aa9.93□□□□□ -0.82
SCARB2-208ENST00000638372 LINC00474Q9P2X8 69 aa9.93□□□□□ -0.82
SCARB2-208ENST00000638372 MPLKIPQ8TAP9 179 aa9.93□□□□□ -0.82
SCARB2-208ENST00000638372 KRTAP24-1Q3LI83 254 aa9.92□□□□□ -0.82
SCARB2-208ENST00000638372 REG3GQ6UW15 175 aa9.92□□□□□ -0.82
SCARB2-208ENST00000638372 LINC00575Q6W349 94 aa9.92□□□□□ -0.82
SCARB2-208ENST00000638372 SMCPP49901 116 aaPredicted RBP9.92□□□□□ -0.82
SCARB2-208ENST00000638372 C10orf25Q5T742 122 aa9.91□□□□□ -0.82
SCARB2-208ENST00000638372 LINC01561Q8N1V8 128 aa9.91□□□□□ -0.82
SCARB2-208ENST00000638372 LINC00846Q9NV44 126 aa9.91□□□□□ -0.82
SCARB2-208ENST00000638372 NBEAQ8NFP9 2946 aa9.91□□□□□ -0.82
SCARB2-208ENST00000638372 Q6Q795 121 aa9.91□□□□□ -0.82
SCARB2-208ENST00000638372 MRPL55Q7Z7F7 128 aaKnown RBP9.9□□□□□ -0.82
SCARB2-208ENST00000638372 A0A096LNT2 108 aa9.9□□□□□ -0.83
SCARB2-208ENST00000638372 DNAH14Q0VDD8 3507 aa9.89□□□□□ -0.83
SCARB2-208ENST00000638372 CDIP1Q9H305 208 aa9.88□□□□□ -0.83
SCARB2-208ENST00000638372 FAM30AQ9NZY2 134 aa9.88□□□□□ -0.83
SCARB2-208ENST00000638372 ZNF706Q9Y5V0 76 aaPredicted RBP9.88□□□□□ -0.83
SCARB2-208ENST00000638372 PRLHP81277 87 aa9.87□□□□□ -0.83
SCARB2-208ENST00000638372 SBSPONQ8IVN8 264 aa9.87□□□□□ -0.83
SCARB2-208ENST00000638372 C6orf48Q9UBA6 75 aa9.87□□□□□ -0.83
SCARB2-208ENST00000638372 NOTCH1P46531 2555 aa9.87□□□□□ -0.83
SCARB2-208ENST00000638372 LINC01556Q5JQF7 62 aa9.87□□□□□ -0.83
SCARB2-208ENST00000638372 FAM218AQ96MZ4 157 aa9.87□□□□□ -0.83
SCARB2-208ENST00000638372 Q8NAQ8 132 aa9.86□□□□□ -0.83
SCARB2-208ENST00000638372 COL6A5A8TX70 2615 aa9.86□□□□□ -0.83
SCARB2-208ENST00000638372 FRYLO94915 3013 aa9.86□□□□□ -0.83
SCARB2-208ENST00000638372 PRO0461Q9UI25 63 aa9.86□□□□□ -0.83
SCARB2-208ENST00000638372 BRK1Q8WUW1 75 aa9.86□□□□□ -0.83
SCARB2-208ENST00000638372 A0A087WSZ3 146 aa9.85□□□□□ -0.83
SCARB2-208ENST00000638372 DEFB116Q30KQ4 102 aa9.85□□□□□ -0.83
SCARB2-208ENST00000638372 C22orf24Q9Y442 160 aa9.84□□□□□ -0.83
SCARB2-208ENST00000638372 BOD1L1Q8NFC6 3051 aa9.84□□□□□ -0.83
SCARB2-208ENST00000638372 Q6ZVQ6 151 aa9.83□□□□□ -0.84
SCARB2-208ENST00000638372 IGLV5-52A0A0A0MRZ9 124 aa9.83□□□□□ -0.84
SCARB2-208ENST00000638372 Q9BRP9 147 aa9.83□□□□□ -0.84
SCARB2-208ENST00000638372 UBR5O95071 2799 aaPredicted RBP9.81□□□□□ -0.84
SCARB2-208ENST00000638372 GCN1Q92616 2671 aaKnown RBP9.81□□□□□ -0.84
SCARB2-208ENST00000638372 PRYO14603 147 aa9.81□□□□□ -0.84
SCARB2-208ENST00000638372 CASC2Q6XLA1 102 aa9.81□□□□□ -0.84
SCARB2-208ENST00000638372 COL6A3P12111 3177 aa9.81□□□□□ -0.84
SCARB2-208ENST00000638372 IGSF10Q6WRI0 2623 aa9.81□□□□□ -0.84
SCARB2-208ENST00000638372 F8WDY8 70 aa9.81□□□□□ -0.84
SCARB2-208ENST00000638372 NDUFC1O43677 76 aa9.81□□□□□ -0.84
SCARB2-208ENST00000638372 TRAV7A0A075B6U4 112 aa9.8□□□□□ -0.84
SCARB2-208ENST00000638372 CIRBP-AS1Q8TBR5 109 aa9.8□□□□□ -0.84
SCARB2-208ENST00000638372 LINC01547P58512 204 aaPredicted RBP9.8□□□□□ -0.84
SCARB2-208ENST00000638372 LITAFQ99732 161 aa9.8□□□□□ -0.84
SCARB2-208ENST00000638372 ATMQ13315 3056 aa9.8□□□□□ -0.84
SCARB2-208ENST00000638372 Q8N9L7 120 aa9.79□□□□□ -0.84
SCARB2-208ENST00000638372 CSNK1G2-AS1Q8NCQ2 148 aa9.79□□□□□ -0.84
SCARB2-208ENST00000638372 EIF4EBP3O60516 100 aaPredicted RBP9.79□□□□□ -0.84
SCARB2-208ENST00000638372 FLNCQ14315 2725 aa9.78□□□□□ -0.84
SCARB2-208ENST00000638372 LINC00167Q96N53 147 aa9.78□□□□□ -0.84
SCARB2-208ENST00000638372 LINC00208Q96KT6 92 aa9.78□□□□□ -0.84
SCARB2-208ENST00000638372 TACC2O95359 2948 aa9.77□□□□□ -0.84
SCARB2-208ENST00000638372 C1orf134Q5TEV5 83 aa9.77□□□□□ -0.85
SCARB2-208ENST00000638372 ADGRG4Q8IZF6 3080 aa9.77□□□□□ -0.85
SCARB2-208ENST00000638372 GIG44P09565 113 aaPredicted RBP9.77□□□□□ -0.85
SCARB2-208ENST00000638372 KIAA0087Q14695 138 aa9.77□□□□□ -0.85
SCARB2-208ENST00000638372 MDFIQ99750 246 aa9.77□□□□□ -0.85
SCARB2-208ENST00000638372 UNC79Q9P2D8 2635 aa9.77□□□□□ -0.85
SCARB2-208ENST00000638372 SMCR5Q8TEV8 140 aa9.76□□□□□ -0.85
SCARB2-208ENST00000638372 H3BNG1 76 aa9.76□□□□□ -0.85
SCARB2-208ENST00000638372 SPTSSBQ8NFR3 76 aa9.75□□□□□ -0.85
SCARB2-208ENST00000638372 NBEAL1Q6ZS30 2694 aa9.75□□□□□ -0.85
SCARB2-208ENST00000638372 DMXL2Q8TDJ6 3036 aa9.74□□□□□ -0.85
SCARB2-208ENST00000638372 SPATA3Q8NHX4 192 aa9.74□□□□□ -0.85
SCARB2-208ENST00000638372 C19orf73Q9NVV2 129 aa9.74□□□□□ -0.85
SCARB2-208ENST00000638372 IGHV6-1A0A0B4J1U7 121 aa9.73□□□□□ -0.85
SCARB2-208ENST00000638372 KALRNO60229 2985 aa9.73□□□□□ -0.85
SCARB2-208ENST00000638372 LINC00588Q9Y4M8 146 aa9.73□□□□□ -0.85
SCARB2-208ENST00000638372 COL12A1Q99715 3063 aa9.73□□□□□ -0.85
SCARB2-208ENST00000638372 NBEAL2Q6ZNJ1 2754 aa9.73□□□□□ -0.85
SCARB2-208ENST00000638372 NHLRC4P0CG21 123 aaPredicted RBP9.72□□□□□ -0.85
SCARB2-208ENST00000638372 SEC61GP60059 68 aa9.72□□□□□ -0.85
SCARB2-208ENST00000638372 TRBV7-7A0A0K0K1E9 115 aa9.71□□□□□ -0.85
SCARB2-208ENST00000638372 KRTAP10-3P60369 221 aa9.71□□□□□ -0.86
SCARB2-208ENST00000638372 SPEGQ15772 3267 aa9.71□□□□□ -0.86
SCARB2-208ENST00000638372 KRTAP1-3Q8IUG1 177 aa9.7□□□□□ -0.86
SCARB2-208ENST00000638372 ATP5EP56381 51 aaPredicted RBP9.7□□□□□ -0.86
SCARB2-208ENST00000638372 A0A0U1RQV1 116 aa9.68□□□□□ -0.86
SCARB2-208ENST00000638372 ELOF1P60002 83 aaKnown RBP9.67□□□□□ -0.86
SCARB2-208ENST00000638372 Q6ZRP5 223 aa9.67□□□□□ -0.86
SCARB2-208ENST00000638372 TMEM254Q8TBM7 123 aa9.66□□□□□ -0.86
SCARB2-208ENST00000638372 ZZEF1O43149 2961 aa9.66□□□□□ -0.86
SCARB2-208ENST00000638372 PHF5AQ7RTV0 110 aaKnown RBP9.65□□□□□ -0.86
SCARB2-208ENST00000638372 PCOTHQ58A44 107 aa9.65□□□□□ -0.86
SCARB2-208ENST00000638372 CHTF8P0CG12 524 aa9.65□□□□□ -0.87
SCARB2-208ENST00000638372 KRTAP10-11P60412 298 aa9.65□□□□□ -0.87
SCARB2-208ENST00000638372 ZNF575Q86XF7 245 aa9.65□□□□□ -0.87
SCARB2-208ENST00000638372 CFAP47Q6ZTR5 3102 aa9.64□□□□□ -0.87
SCARB2-208ENST00000638372 EYSQ5T1H1 3165 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms