RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 S100A1P23297 94 aa7.63□□□□□ -1.19
CLN6-225ENST00000638144 MEIG1Q5JSS6 88 aa7.63□□□□□ -1.19
CLN6-225ENST00000638144 TP73-AS1Q9UF72 201 aa7.63□□□□□ -1.19
CLN6-225ENST00000638144 LEPROTO15243 131 aa7.62□□□□□ -1.19
CLN6-225ENST00000638144 VPREB1P12018 145 aa7.62□□□□□ -1.19
CLN6-225ENST00000638144 COX17Q14061 63 aa7.62□□□□□ -1.19
CLN6-225ENST00000638144 LBHQ53QV2 105 aaPredicted RBP7.62□□□□□ -1.19
CLN6-225ENST00000638144 SFTA2Q6UW10 78 aa7.62□□□□□ -1.19
CLN6-225ENST00000638144 PLA2G2DQ9UNK4 145 aa7.62□□□□□ -1.19
CLN6-225ENST00000638144 IGLV5-37A0A075B6J1 123 aa7.61□□□□□ -1.19
CLN6-225ENST00000638144 COA6Q5JTJ3 125 aaKnown RBP7.61□□□□□ -1.19
CLN6-225ENST00000638144 REG3GQ6UW15 175 aa7.61□□□□□ -1.19
CLN6-225ENST00000638144 PLEKHB2Q96CS7 222 aa7.61□□□□□ -1.19
CLN6-225ENST00000638144 TNXBP22105 4242 aa7.6□□□□□ -1.19
CLN6-225ENST00000638144 IGKV2-28A0A075B6P5 120 aa7.6□□□□□ -1.19
CLN6-225ENST00000638144 J3QQQ9 107 aa7.6□□□□□ -1.19
CLN6-225ENST00000638144 IGKV2D-28P01615 120 aa7.6□□□□□ -1.19
CLN6-225ENST00000638144 C3orf79P0CE67 100 aa7.6□□□□□ -1.19
CLN6-225ENST00000638144 HERVK_113P61574 105 aa7.6□□□□□ -1.19
CLN6-225ENST00000638144 MIR7-3HGQ8N6C7 128 aa7.6□□□□□ -1.19
CLN6-225ENST00000638144 DAND5Q8N907 189 aa7.6□□□□□ -1.19
CLN6-225ENST00000638144 MYMXA0A1B0GTQ4 84 aa7.59□□□□□ -1.19
CLN6-225ENST00000638144 LGALS3P17931 250 aaKnown RBP7.59□□□□□ -1.19
CLN6-225ENST00000638144 KRTDAPP60985 99 aa7.59□□□□□ -1.19
CLN6-225ENST00000638144 LINC01545Q5VT33 79 aa7.59□□□□□ -1.19
CLN6-225ENST00000638144 LINC01600Q96MT4 127 aa7.59□□□□□ -1.19
CLN6-225ENST00000638144 H0Y9J4 135 aa7.58□□□□□ -1.2
CLN6-225ENST00000638144 HERV-K104P63124 156 aa7.58□□□□□ -1.2
CLN6-225ENST00000638144 DIRC1Q969H9 104 aa7.58□□□□□ -1.2
CLN6-225ENST00000638144 PET117Q6UWS5 81 aa7.57□□□□□ -1.2
CLN6-225ENST00000638144 TMEM238C9JI98 176 aa7.56□□□□□ -1.2
CLN6-225ENST00000638144 NCR3O14931 201 aa7.56□□□□□ -1.2
CLN6-225ENST00000638144 BCE1O60756 84 aa7.56□□□□□ -1.2
CLN6-225ENST00000638144 RPL24P83731 157 aaKnown RBP7.56□□□□□ -1.2
CLN6-225ENST00000638144 BOD1L2Q8IYS8 172 aa7.56□□□□□ -1.2
CLN6-225ENST00000638144 E9PLD3 99 aa7.55□□□□□ -1.2
CLN6-225ENST00000638144 ZNF861PO60384 105 aa7.55□□□□□ -1.2
CLN6-225ENST00000638144 TTTY13Q9BZ97 58 aa7.55□□□□□ -1.2
CLN6-225ENST00000638144 IGLV1-50A0A075B6I6 118 aa7.54□□□□□ -1.2
CLN6-225ENST00000638144 IGKV2D-26A0A0A0MRZ7 120 aa7.54□□□□□ -1.2
CLN6-225ENST00000638144 NMUP48645 174 aa7.54□□□□□ -1.2
CLN6-225ENST00000638144 NPC2P61916 151 aa7.54□□□□□ -1.2
CLN6-225ENST00000638144 ATOH7Q8N100 152 aa7.54□□□□□ -1.2
CLN6-225ENST00000638144 PRR26Q8N8Z3 221 aa7.54□□□□□ -1.2
CLN6-225ENST00000638144 KRTAP1-4P0C5Y4 121 aa7.53□□□□□ -1.2
CLN6-225ENST00000638144 UBE2AP49459 152 aa7.53□□□□□ -1.2
CLN6-225ENST00000638144 KRTAP10-8P60410 259 aa7.53□□□□□ -1.2
CLN6-225ENST00000638144 PRLHP81277 87 aa7.53□□□□□ -1.2
CLN6-225ENST00000638144 A0A0J9YXY3 114 aa7.52□□□□□ -1.21
CLN6-225ENST00000638144 RPL28P46779 137 aaKnown RBP7.52□□□□□ -1.21
CLN6-225ENST00000638144 HIST3H2BBQ8N257 126 aa7.52□□□□□ -1.21
CLN6-225ENST00000638144 TMEM126AQ9H061 195 aa7.52□□□□□ -1.21
CLN6-225ENST00000638144 LINC00587B1AMM8 73 aa7.51□□□□□ -1.21
CLN6-225ENST00000638144 M0R378 163 aa7.51□□□□□ -1.21
CLN6-225ENST00000638144 EIF4EBP3O60516 100 aaPredicted RBP7.51□□□□□ -1.21
CLN6-225ENST00000638144 ADAMTSL4-AS1Q5T5F5 129 aa7.51□□□□□ -1.21
CLN6-225ENST00000638144 FAM19A1Q7Z5A9 133 aa7.51□□□□□ -1.21
CLN6-225ENST00000638144 KRTAP13-1Q8IUC0 172 aa7.51□□□□□ -1.21
CLN6-225ENST00000638144 HMCN2Q8NDA2 5059 aa7.51□□□□□ -1.21
CLN6-225ENST00000638144 C20orf202A1L168 122 aa7.5□□□□□ -1.21
CLN6-225ENST00000638144 ANKRD39Q53RE8 183 aa7.5□□□□□ -1.21
CLN6-225ENST00000638144 SOSTDC1Q6X4U4 206 aa7.5□□□□□ -1.21
CLN6-225ENST00000638144 HIST1H2BLQ99880 126 aa7.5□□□□□ -1.21
CLN6-225ENST00000638144 ZNF815PA8K554 130 aa7.49□□□□□ -1.21
CLN6-225ENST00000638144 TRBV10-3A0A0K0K1G6 114 aa7.48□□□□□ -1.21
CLN6-225ENST00000638144 S100A6P06703 90 aa7.48□□□□□ -1.21
CLN6-225ENST00000638144 S100A2P29034 98 aa7.48□□□□□ -1.21
CLN6-225ENST00000638144 LITAFQ99732 161 aa7.48□□□□□ -1.21
CLN6-225ENST00000638144 MIEN1Q9BRT3 115 aa7.48□□□□□ -1.21
CLN6-225ENST00000638144 ANAPC11Q9NYG5 84 aa7.48□□□□□ -1.21
CLN6-225ENST00000638144 SNRPEP62304 92 aaKnown RBP7.46□□□□□ -1.22
CLN6-225ENST00000638144 A0A087X002 238 aa7.45□□□□□ -1.22
CLN6-225ENST00000638144 LOC107984156A0A0G2JMH3 177 aa7.45□□□□□ -1.22
CLN6-225ENST00000638144 PRYO14603 147 aa7.45□□□□□ -1.22
CLN6-225ENST00000638144 ARL17AQ8IVW1 177 aa7.45□□□□□ -1.22
CLN6-225ENST00000638144 HIGD2AQ9BW72 106 aa7.45□□□□□ -1.22
CLN6-225ENST00000638144 DDTP30046 118 aa7.44□□□□□ -1.22
CLN6-225ENST00000638144 PCP2Q8IVA1 136 aa7.44□□□□□ -1.22
CLN6-225ENST00000638144 SPANXB1Q9NS25 103 aaPredicted RBP7.44□□□□□ -1.22
CLN6-225ENST00000638144 LINC00308Q8TCZ7 52 aa7.43□□□□□ -1.22
CLN6-225ENST00000638144 KCNQ1DNQ9H478 68 aa7.43□□□□□ -1.22
CLN6-225ENST00000638144 TIMM17BO60830 172 aa7.42□□□□□ -1.22
CLN6-225ENST00000638144 SCGB1D4Q6XE38 83 aa7.42□□□□□ -1.22
CLN6-225ENST00000638144 TRBV10-2A0A0K0K1G8 114 aa7.41□□□□□ -1.22
CLN6-225ENST00000638144 ETDCA0A1B0GVM5 59 aa7.41□□□□□ -1.22
CLN6-225ENST00000638144 NDUFC2O95298 119 aa7.41□□□□□ -1.22
CLN6-225ENST00000638144 S100A7L2Q5SY68 101 aa7.41□□□□□ -1.22
CLN6-225ENST00000638144 KRTAP4-16G5E9R7 235 aaPredicted RBP7.4□□□□□ -1.22
CLN6-225ENST00000638144 SPRR1AP35321 89 aa7.4□□□□□ -1.22
CLN6-225ENST00000638144 RPL13AP40429 203 aaKnown RBP7.4□□□□□ -1.22
CLN6-225ENST00000638144 C5orf52A6NGY3 159 aa7.39□□□□□ -1.23
CLN6-225ENST00000638144 IGLV6-57P01721 117 aa7.39□□□□□ -1.23
CLN6-225ENST00000638144 CRYGAP11844 174 aa7.39□□□□□ -1.23
CLN6-225ENST00000638144 KRTAP13-2Q52LG2 175 aa7.39□□□□□ -1.23
CLN6-225ENST00000638144 LINC00337Q8N6G1 96 aa7.39□□□□□ -1.23
CLN6-225ENST00000638144 SPANXCQ9NY87 97 aa7.39□□□□□ -1.23
CLN6-225ENST00000638144 TRAV23DV6A0A075B6W5 121 aa7.38□□□□□ -1.23
CLN6-225ENST00000638144 SCGB1D1O95968 90 aa7.38□□□□□ -1.23
CLN6-225ENST00000638144 OR13C6PQ8NH95 151 aa7.38□□□□□ -1.23
CLN6-225ENST00000638144 SMCR5Q8TEV8 140 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms