RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 C11orf72Q8NBR9 251 aa8.15□□□□□ -1.1
SHPRH-211ENST00000629427 CXCL6P80162 114 aa8.15□□□□□ -1.1
SHPRH-211ENST00000629427 PHF5AQ7RTV0 110 aaKnown RBP8.15□□□□□ -1.1
SHPRH-211ENST00000629427 TMEM254Q8TBM7 123 aa8.15□□□□□ -1.11
SHPRH-211ENST00000629427 SMIM29Q86T20 159 aa8.14□□□□□ -1.11
SHPRH-211ENST00000629427 COL4A2P08572 1712 aa8.14□□□□□ -1.11
SHPRH-211ENST00000629427 USP9XQ93008 2570 aaPredicted RBP8.14□□□□□ -1.11
SHPRH-211ENST00000629427 A0A096LNJ9 63 aa8.14□□□□□ -1.11
SHPRH-211ENST00000629427 RTL8CO15255 209 aa8.13□□□□□ -1.11
SHPRH-211ENST00000629427 ANKRD11Q6UB99 2663 aaPredicted RBP8.13□□□□□ -1.11
SHPRH-211ENST00000629427 C6orf48Q9UBA6 75 aa8.13□□□□□ -1.11
SHPRH-211ENST00000629427 A0A1B0GU69 56 aa8.13□□□□□ -1.11
SHPRH-211ENST00000629427 PLA2G1BP04054 148 aaKnown RBP8.13□□□□□ -1.11
SHPRH-211ENST00000629427 LINC00313P59037 77 aa8.13□□□□□ -1.11
SHPRH-211ENST00000629427 C10orf142B7Z368 130 aa8.13□□□□□ -1.11
SHPRH-211ENST00000629427 LINC00315P59091 139 aa8.12□□□□□ -1.11
SHPRH-211ENST00000629427 ACYP2P14621 99 aa8.12□□□□□ -1.11
SHPRH-211ENST00000629427 KIF25-AS1Q9Y6Z4 181 aa8.12□□□□□ -1.11
SHPRH-211ENST00000629427 SPATA3Q8NHX4 192 aa8.11□□□□□ -1.11
SHPRH-211ENST00000629427 F8P00451 2351 aa8.11□□□□□ -1.11
SHPRH-211ENST00000629427 ACANP16112 2415 aa8.11□□□□□ -1.11
SHPRH-211ENST00000629427 IGHV3OR16-9A0A0B4J2B5 98 aa8.1□□□□□ -1.11
SHPRH-211ENST00000629427 TP53AIP1Q9HCN2 124 aa8.1□□□□□ -1.11
SHPRH-211ENST00000629427 ZNF462Q96JM2 2506 aa8.1□□□□□ -1.11
SHPRH-211ENST00000629427 Q6ZRP5 223 aa8.09□□□□□ -1.11
SHPRH-211ENST00000629427 KRTAP24-1Q3LI83 254 aa8.09□□□□□ -1.11
SHPRH-211ENST00000629427 SPTBN4Q9H254 2564 aa8.09□□□□□ -1.12
SHPRH-211ENST00000629427 PKD1L2Q7Z442 2459 aa8.08□□□□□ -1.12
SHPRH-211ENST00000629427 NBDYA0A0U1RRE5 68 aa8.07□□□□□ -1.12
SHPRH-211ENST00000629427 IGLV5-39A0A0G2JS06 123 aa8.07□□□□□ -1.12
SHPRH-211ENST00000629427 J3QL48 77 aa8.07□□□□□ -1.12
SHPRH-211ENST00000629427 H3BNG1 76 aa8.07□□□□□ -1.12
SHPRH-211ENST00000629427 EPM2AB3EWF7 344 aa8.06□□□□□ -1.12
SHPRH-211ENST00000629427 Q96NJ1 140 aa8.06□□□□□ -1.12
SHPRH-211ENST00000629427 SPAG11AQ6PDA7 123 aa8.06□□□□□ -1.12
SHPRH-211ENST00000629427 LINC00476Q8WZB0 136 aa8.06□□□□□ -1.12
SHPRH-211ENST00000629427 IGLV8-61A0A075B6I0 122 aa8.05□□□□□ -1.12
SHPRH-211ENST00000629427 FAM19A4Q96LR4 140 aa8.04□□□□□ -1.12
SHPRH-211ENST00000629427 LINC00588Q9Y4M8 146 aa8.04□□□□□ -1.12
SHPRH-211ENST00000629427 Q8NBF4 154 aa8.04□□□□□ -1.12
SHPRH-211ENST00000629427 ELOF1P60002 83 aaKnown RBP8.03□□□□□ -1.12
SHPRH-211ENST00000629427 ATP11AUNQ6ZP68 121 aa8.03□□□□□ -1.12
SHPRH-211ENST00000629427 RPL37AP61513 92 aaKnown RBP8.02□□□□□ -1.13
SHPRH-211ENST00000629427 Q6ZRX8 168 aa8.02□□□□□ -1.13
SHPRH-211ENST00000629427 LINC01546A6NGU7 62 aa8.01□□□□□ -1.13
SHPRH-211ENST00000629427 WWC2-AS2Q96NR7 200 aa8.01□□□□□ -1.13
SHPRH-211ENST00000629427 ST20-AS1Q8NBB2 130 aa8.01□□□□□ -1.13
SHPRH-211ENST00000629427 Q8NAQ8 132 aa8□□□□□ -1.13
SHPRH-211ENST00000629427 DNAH12Q6ZR08 3092 aa8□□□□□ -1.13
SHPRH-211ENST00000629427 BCE1O60756 84 aa8□□□□□ -1.13
SHPRH-211ENST00000629427 USP9YO00507 2555 aaPredicted RBP7.99□□□□□ -1.13
SHPRH-211ENST00000629427 FAM218AQ96MZ4 157 aa7.99□□□□□ -1.13
SHPRH-211ENST00000629427 BPTFQ12830 3046 aa7.98□□□□□ -1.13
SHPRH-211ENST00000629427 FAM168BA1KXE4 195 aa7.97□□□□□ -1.13
SHPRH-211ENST00000629427 Q6ZQT0 140 aa7.97□□□□□ -1.13
SHPRH-211ENST00000629427 TRAV22A0A0B4J277 110 aa7.96□□□□□ -1.13
SHPRH-211ENST00000629427 COX6B2Q6YFQ2 88 aa7.96□□□□□ -1.14
SHPRH-211ENST00000629427 IGLV5-45A0A087WSX0 123 aa7.95□□□□□ -1.14
SHPRH-211ENST00000629427 GVQW2A0A096LPI5 108 aaPredicted RBP7.95□□□□□ -1.14
SHPRH-211ENST00000629427 A0A1B0GW54 56 aa7.95□□□□□ -1.14
SHPRH-211ENST00000629427 CDIP1Q9H305 208 aa7.95□□□□□ -1.14
SHPRH-211ENST00000629427 MTORP42345 2549 aa7.94□□□□□ -1.14
SHPRH-211ENST00000629427 DNAH10OSP0CZ25 163 aa7.94□□□□□ -1.14
SHPRH-211ENST00000629427 POLQO75417 2590 aa7.93□□□□□ -1.14
SHPRH-211ENST00000629427 LOC110117498A0A087WWA1 95 aa7.91□□□□□ -1.14
SHPRH-211ENST00000629427 H3BPC8 53 aa7.91□□□□□ -1.14
SHPRH-211ENST00000629427 SPINT4Q6UDR6 99 aa7.91□□□□□ -1.14
SHPRH-211ENST00000629427 CHD8Q9HCK8 2581 aa7.91□□□□□ -1.14
SHPRH-211ENST00000629427 UTRNP46939 3433 aa7.91□□□□□ -1.14
SHPRH-211ENST00000629427 FASNP49327 2511 aaKnown RBP7.9□□□□□ -1.14
SHPRH-211ENST00000629427 TM2D3Q9BRN9 247 aa7.89□□□□□ -1.15
SHPRH-211ENST00000629427 TRBV7-4A0A0J9YYF1 115 aa7.88□□□□□ -1.15
SHPRH-211ENST00000629427 A8MWP4 228 aa7.88□□□□□ -1.15
SHPRH-211ENST00000629427 C8orf87E5RJ46 101 aa7.88□□□□□ -1.15
SHPRH-211ENST00000629427 C9orf92A6NGG3 77 aa7.87□□□□□ -1.15
SHPRH-211ENST00000629427 SERTAD4-AS1Q5TG53 156 aa7.87□□□□□ -1.15
SHPRH-211ENST00000629427 SMCPP49901 116 aaPredicted RBP7.87□□□□□ -1.15
SHPRH-211ENST00000629427 MRPL34Q9BQ48 92 aaKnown RBP7.86□□□□□ -1.15
SHPRH-211ENST00000629427 KRTAP10-11P60412 298 aa7.86□□□□□ -1.15
SHPRH-211ENST00000629427 C4orf26Q17RF5 130 aa7.86□□□□□ -1.15
SHPRH-211ENST00000629427 IGLV6-57P01721 117 aa7.85□□□□□ -1.15
SHPRH-211ENST00000629427 VPREB1P12018 145 aa7.85□□□□□ -1.15
SHPRH-211ENST00000629427 LINC00304Q8N9R0 145 aa7.85□□□□□ -1.15
SHPRH-211ENST00000629427 SMR3BP02814 79 aaPredicted RBP7.84□□□□□ -1.15
SHPRH-211ENST00000629427 LOC101927531A0A1B0GV80 90 aa7.84□□□□□ -1.15
SHPRH-211ENST00000629427 K7EQZ3 153 aa7.84□□□□□ -1.15
SHPRH-211ENST00000629427 DSCR10P59022 87 aa7.84□□□□□ -1.15
SHPRH-211ENST00000629427 K7EIL1 84 aa7.84□□□□□ -1.15
SHPRH-211ENST00000629427 APLNQ9ULZ1 77 aa7.83□□□□□ -1.16
SHPRH-211ENST00000629427 CR1P17927 2039 aa7.83□□□□□ -1.16
SHPRH-211ENST00000629427 SSBP3-AS1Q7Z2R9 100 aa7.83□□□□□ -1.16
SHPRH-211ENST00000629427 OBSCN-AS1Q96MR7 158 aa7.83□□□□□ -1.16
SHPRH-211ENST00000629427 USP24Q9UPU5 2620 aa7.83□□□□□ -1.16
SHPRH-211ENST00000629427 CEP295Q9C0D2 2601 aa7.82□□□□□ -1.16
SHPRH-211ENST00000629427 IGLV1-50A0A075B6I6 118 aa7.82□□□□□ -1.16
SHPRH-211ENST00000629427 LINC01600Q96MT4 127 aa7.81□□□□□ -1.16
SHPRH-211ENST00000629427 PRO0628Q9UI54 55 aa7.81□□□□□ -1.16
SHPRH-211ENST00000629427 C5orf42Q9H799 3197 aa7.81□□□□□ -1.16
SHPRH-211ENST00000629427 CSNK1G2-AS1Q8NCQ2 148 aa7.8□□□□□ -1.16
SHPRH-211ENST00000629427 PRRC2CQ9Y520 2896 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms