RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 DPM2O94777 84 aa12.54□□□□□ -0.4
CIRBP-246ENST00000628979 PLNP26678 52 aa12.54□□□□□ -0.4
CIRBP-246ENST00000628979 MEIG1Q5JSS6 88 aa12.54□□□□□ -0.4
CIRBP-246ENST00000628979 ATP6V1G1O75348 118 aa12.53□□□□□ -0.4
CIRBP-246ENST00000628979 SMIM13P0DJ93 91 aa12.53□□□□□ -0.4
CIRBP-246ENST00000628979 IGKCP01834 107 aa12.52□□□□□ -0.41
CIRBP-246ENST00000628979 KRTAP10-8P60410 259 aa12.52□□□□□ -0.41
CIRBP-246ENST00000628979 NDUFA12Q9UI09 145 aa12.52□□□□□ -0.41
CIRBP-246ENST00000628979 TNXBP22105 4242 aa12.52□□□□□ -0.41
CIRBP-246ENST00000628979 VPREB1P12018 145 aa12.51□□□□□ -0.41
CIRBP-246ENST00000628979 RPL24P83731 157 aaKnown RBP12.51□□□□□ -0.41
CIRBP-246ENST00000628979 IGKV2-28A0A075B6P5 120 aa12.5□□□□□ -0.41
CIRBP-246ENST00000628979 MYMXA0A1B0GTQ4 84 aa12.5□□□□□ -0.41
CIRBP-246ENST00000628979 LEPROTO15243 131 aa12.5□□□□□ -0.41
CIRBP-246ENST00000628979 ZNF861PO60384 105 aa12.5□□□□□ -0.41
CIRBP-246ENST00000628979 IGKV2D-28P01615 120 aa12.5□□□□□ -0.41
CIRBP-246ENST00000628979 HERVK_113P61574 105 aa12.5□□□□□ -0.41
CIRBP-246ENST00000628979 HERV-K104P63124 156 aa12.5□□□□□ -0.41
CIRBP-246ENST00000628979 BCE1O60756 84 aa12.49□□□□□ -0.41
CIRBP-246ENST00000628979 TSPEAR-AS2P59090 65 aa12.49□□□□□ -0.41
CIRBP-246ENST00000628979 PLEKHB2Q96CS7 222 aa12.49□□□□□ -0.41
CIRBP-246ENST00000628979 Q8NDZ9 215 aa12.48□□□□□ -0.41
CIRBP-246ENST00000628979 SYS1-DBNDD2H3BUS1 97 aa12.46□□□□□ -0.41
CIRBP-246ENST00000628979 J3QQQ9 107 aa12.46□□□□□ -0.41
CIRBP-246ENST00000628979 MIR7-3HGQ8N6C7 128 aa12.46□□□□□ -0.41
CIRBP-246ENST00000628979 PRR26Q8N8Z3 221 aa12.46□□□□□ -0.41
CIRBP-246ENST00000628979 LGALS3P17931 250 aaKnown RBP12.45□□□□□ -0.42
CIRBP-246ENST00000628979 RPL28P46779 137 aaKnown RBP12.45□□□□□ -0.42
CIRBP-246ENST00000628979 IGLV1-50A0A075B6I6 118 aa12.44□□□□□ -0.42
CIRBP-246ENST00000628979 LINC00587B1AMM8 73 aa12.44□□□□□ -0.42
CIRBP-246ENST00000628979 UBE2AP49459 152 aa12.43□□□□□ -0.42
CIRBP-246ENST00000628979 BOD1L2Q8IYS8 172 aa12.42□□□□□ -0.42
CIRBP-246ENST00000628979 TMEM238C9JI98 176 aa12.41□□□□□ -0.42
CIRBP-246ENST00000628979 KRTAP1-4P0C5Y4 121 aa12.41□□□□□ -0.42
CIRBP-246ENST00000628979 DAND5Q8N907 189 aa12.4□□□□□ -0.42
CIRBP-246ENST00000628979 M0R378 163 aa12.39□□□□□ -0.43
CIRBP-246ENST00000628979 NCR3O14931 201 aa12.39□□□□□ -0.43
CIRBP-246ENST00000628979 NMUP48645 174 aa12.39□□□□□ -0.43
CIRBP-246ENST00000628979 PET117Q6UWS5 81 aa12.39□□□□□ -0.43
CIRBP-246ENST00000628979 FAM19A1Q7Z5A9 133 aa12.39□□□□□ -0.43
CIRBP-246ENST00000628979 TMEM126AQ9H061 195 aa12.39□□□□□ -0.43
CIRBP-246ENST00000628979 C3orf79P0CE67 100 aa12.38□□□□□ -0.43
CIRBP-246ENST00000628979 S100A1P23297 94 aa12.38□□□□□ -0.43
CIRBP-246ENST00000628979 COA6Q5JTJ3 125 aaKnown RBP12.38□□□□□ -0.43
CIRBP-246ENST00000628979 LINC01545Q5VT33 79 aa12.38□□□□□ -0.43
CIRBP-246ENST00000628979 E9PLD3 99 aa12.37□□□□□ -0.43
CIRBP-246ENST00000628979 KRTDAPP60985 99 aa12.37□□□□□ -0.43
CIRBP-246ENST00000628979 PRLHP81277 87 aa12.36□□□□□ -0.43
CIRBP-246ENST00000628979 HMCN2Q8NDA2 5059 aa12.35□□□□□ -0.43
CIRBP-246ENST00000628979 KRTAP13-1Q8IUC0 172 aa12.35□□□□□ -0.43
CIRBP-246ENST00000628979 A0A0J9YXY3 114 aa12.32□□□□□ -0.44
CIRBP-246ENST00000628979 RPL13AP40429 203 aaKnown RBP12.31□□□□□ -0.44
CIRBP-246ENST00000628979 NPC2P61916 151 aa12.31□□□□□ -0.44
CIRBP-246ENST00000628979 MIEN1Q9BRT3 115 aa12.31□□□□□ -0.44
CIRBP-246ENST00000628979 ANAPC11Q9NYG5 84 aa12.31□□□□□ -0.44
CIRBP-246ENST00000628979 IGKV2D-26A0A0A0MRZ7 120 aa12.3□□□□□ -0.44
CIRBP-246ENST00000628979 TRBV10-3A0A0K0K1G6 114 aa12.28□□□□□ -0.44
CIRBP-246ENST00000628979 C20orf202A1L168 122 aa12.28□□□□□ -0.44
CIRBP-246ENST00000628979 PRYO14603 147 aa12.28□□□□□ -0.44
CIRBP-246ENST00000628979 ADAMTSL4-AS1Q5T5F5 129 aa12.28□□□□□ -0.44
CIRBP-246ENST00000628979 LOC107984156A0A0G2JMH3 177 aa12.27□□□□□ -0.45
CIRBP-246ENST00000628979 ARL17AQ8IVW1 177 aa12.27□□□□□ -0.45
CIRBP-246ENST00000628979 HIGD2AQ9BW72 106 aa12.27□□□□□ -0.45
CIRBP-246ENST00000628979 A0A087X002 238 aa12.26□□□□□ -0.45
CIRBP-246ENST00000628979 CRYGAP11844 174 aa12.26□□□□□ -0.45
CIRBP-246ENST00000628979 ZNF815PA8K554 130 aa12.25□□□□□ -0.45
CIRBP-246ENST00000628979 ATOH7Q8N100 152 aa12.25□□□□□ -0.45
CIRBP-246ENST00000628979 TTTY13Q9BZ97 58 aa12.25□□□□□ -0.45
CIRBP-246ENST00000628979 S100A12P80511 92 aa12.24□□□□□ -0.45
CIRBP-246ENST00000628979 SOSTDC1Q6X4U4 206 aa12.24□□□□□ -0.45
CIRBP-246ENST00000628979 KCNQ1DNQ9H478 68 aa12.24□□□□□ -0.45
CIRBP-246ENST00000628979 DDTP30046 118 aa12.23□□□□□ -0.45
CIRBP-246ENST00000628979 TYMSOSQ8TAI1 123 aa12.23□□□□□ -0.45
CIRBP-246ENST00000628979 SPANXB1Q9NS25 103 aaPredicted RBP12.23□□□□□ -0.45
CIRBP-246ENST00000628979 TRBV10-2A0A0K0K1G8 114 aa12.22□□□□□ -0.45
CIRBP-246ENST00000628979 ETDCA0A1B0GVM5 59 aa12.22□□□□□ -0.45
CIRBP-246ENST00000628979 EIF4EBP3O60516 100 aaPredicted RBP12.22□□□□□ -0.45
CIRBP-246ENST00000628979 NDUFC2O95298 119 aa12.21□□□□□ -0.45
CIRBP-246ENST00000628979 S100A2P29034 98 aa12.21□□□□□ -0.45
CIRBP-246ENST00000628979 S100A7L2Q5SY68 101 aa12.21□□□□□ -0.45
CIRBP-246ENST00000628979 ANKRD39Q53RE8 183 aa12.2□□□□□ -0.46
CIRBP-246ENST00000628979 HIST3H2BBQ8N257 126 aa12.2□□□□□ -0.46
CIRBP-246ENST00000628979 LINC00337Q8N6G1 96 aa12.2□□□□□ -0.46
CIRBP-246ENST00000628979 S100A6P06703 90 aa12.19□□□□□ -0.46
CIRBP-246ENST00000628979 SPRR1AP35321 89 aa12.19□□□□□ -0.46
CIRBP-246ENST00000628979 LITAFQ99732 161 aa12.19□□□□□ -0.46
CIRBP-246ENST00000628979 TIMM17BO60830 172 aa12.18□□□□□ -0.46
CIRBP-246ENST00000628979 FAM229BQ4G0N7 80 aa12.18□□□□□ -0.46
CIRBP-246ENST00000628979 LINC00308Q8TCZ7 52 aa12.18□□□□□ -0.46
CIRBP-246ENST00000628979 TSPAN13O95857 204 aa12.17□□□□□ -0.46
CIRBP-246ENST00000628979 KRTAP13-2Q52LG2 175 aa12.17□□□□□ -0.46
CIRBP-246ENST00000628979 HIST1H2BLQ99880 126 aa12.17□□□□□ -0.46
CIRBP-246ENST00000628979 KRTAP4-16G5E9R7 235 aaPredicted RBP12.16□□□□□ -0.46
CIRBP-246ENST00000628979 SCGB1D4Q6XE38 83 aa12.16□□□□□ -0.46
CIRBP-246ENST00000628979 SMCR5Q8TEV8 140 aa12.16□□□□□ -0.46
CIRBP-246ENST00000628979 AKR1D1P51857 326 aa12.15□□□□□ -0.46
CIRBP-246ENST00000628979 B5MCH6 92 aa12.14□□□□□ -0.47
CIRBP-246ENST00000628979 IGLV6-57P01721 117 aa12.14□□□□□ -0.47
CIRBP-246ENST00000628979 TRAV23DV6A0A075B6W5 121 aa12.13□□□□□ -0.47
CIRBP-246ENST00000628979 OR13C6PQ8NH95 151 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms