RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 M0QXV9 152 aa4.59□□□□□ -1.67
TCF4-260ENST00000627685 HBDP02042 147 aa4.59□□□□□ -1.67
TCF4-260ENST00000627685 FA2HQ7L5A8 372 aa4.59□□□□□ -1.67
TCF4-260ENST00000627685 KRTAP13-1Q8IUC0 172 aa4.59□□□□□ -1.67
TCF4-260ENST00000627685 LINC00469Q8N7U9 141 aa4.59□□□□□ -1.67
TCF4-260ENST00000627685 XAGE1AQ9HD64 81 aa4.59□□□□□ -1.67
TCF4-260ENST00000627685 TOMM7Q9P0U1 55 aa4.59□□□□□ -1.67
TCF4-260ENST00000627685 IGLV5-37A0A075B6J1 123 aa4.58□□□□□ -1.68
TCF4-260ENST00000627685 COLCA2A8K830 154 aa4.58□□□□□ -1.68
TCF4-260ENST00000627685 H0Y9J4 135 aa4.58□□□□□ -1.68
TCF4-260ENST00000627685 NUPR1O60356 82 aa4.58□□□□□ -1.68
TCF4-260ENST00000627685 COX7B2Q8TF08 81 aa4.58□□□□□ -1.68
TCF4-260ENST00000627685 ZNF625Q96I27 306 aaPredicted RBP4.58□□□□□ -1.68
TCF4-260ENST00000627685 TP73-AS1Q9UF72 201 aa4.58□□□□□ -1.68
TCF4-260ENST00000627685 LBHQ53QV2 105 aaPredicted RBP4.57□□□□□ -1.68
TCF4-260ENST00000627685 C22orf24Q9Y442 160 aa4.57□□□□□ -1.68
TCF4-260ENST00000627685 SCO1O75880 301 aa4.56□□□□□ -1.68
TCF4-260ENST00000627685 TRGC2P03986 189 aa4.56□□□□□ -1.68
TCF4-260ENST00000627685 UBE2BP63146 152 aa4.56□□□□□ -1.68
TCF4-260ENST00000627685 CHCHD1Q96BP2 118 aaKnown RBP4.56□□□□□ -1.68
TCF4-260ENST00000627685 SMCO4Q9NRQ5 59 aa4.56□□□□□ -1.68
TCF4-260ENST00000627685 RNF213Q63HN8 5207 aa4.55□□□□□ -1.68
TCF4-260ENST00000627685 IGLV1-50A0A075B6I6 118 aa4.55□□□□□ -1.68
TCF4-260ENST00000627685 TRAV12-1A0A0B4J245 112 aa4.55□□□□□ -1.68
TCF4-260ENST00000627685 ZNF861PO60384 105 aa4.55□□□□□ -1.68
TCF4-260ENST00000627685 VPREB1P12018 145 aa4.55□□□□□ -1.68
TCF4-260ENST00000627685 TSPEAR-AS2P59090 65 aa4.55□□□□□ -1.68
TCF4-260ENST00000627685 NDUFA5Q16718 116 aa4.55□□□□□ -1.68
TCF4-260ENST00000627685 FAM19A2Q8N3H0 131 aa4.55□□□□□ -1.68
TCF4-260ENST00000627685 TMEM223A0PJW6 202 aa4.54□□□□□ -1.68
TCF4-260ENST00000627685 H3BRM9 83 aa4.54□□□□□ -1.68
TCF4-260ENST00000627685 SERF1AO75920 110 aa4.54□□□□□ -1.68
TCF4-260ENST00000627685 RAB5BP61020 215 aa4.54□□□□□ -1.68
TCF4-260ENST00000627685 MRPL55Q7Z7F7 128 aaKnown RBP4.54□□□□□ -1.68
TCF4-260ENST00000627685 PRR26Q8N8Z3 221 aa4.54□□□□□ -1.68
TCF4-260ENST00000627685 ATP5LO75964 103 aa4.53□□□□□ -1.68
TCF4-260ENST00000627685 BAGE3Q86Y29 109 aa4.53□□□□□ -1.68
TCF4-260ENST00000627685 IFI27L1Q96BM0 104 aa4.53□□□□□ -1.68
TCF4-260ENST00000627685 LINC00167Q96N53 147 aa4.53□□□□□ -1.68
TCF4-260ENST00000627685 SND1-IT1Q9HBX3 110 aa4.53□□□□□ -1.68
TCF4-260ENST00000627685 A0A087X002 238 aa4.52□□□□□ -1.69
TCF4-260ENST00000627685 BCE1O60756 84 aa4.52□□□□□ -1.69
TCF4-260ENST00000627685 RPL13AP40429 203 aaKnown RBP4.52□□□□□ -1.69
TCF4-260ENST00000627685 SFTA2Q6UW10 78 aa4.52□□□□□ -1.69
TCF4-260ENST00000627685 ERG28Q9UKR5 140 aa4.52□□□□□ -1.69
TCF4-260ENST00000627685 CHTOPQ9Y3Y2 248 aaKnown RBP4.52□□□□□ -1.69
TCF4-260ENST00000627685 LPAP08519 4548 aa4.51□□□□□ -1.69
TCF4-260ENST00000627685 RPL28P46779 137 aaKnown RBP4.51□□□□□ -1.69
TCF4-260ENST00000627685 COX17Q14061 63 aa4.51□□□□□ -1.69
TCF4-260ENST00000627685 RPL37AP8A6NKH3 93 aa4.5□□□□□ -1.69
TCF4-260ENST00000627685 M0R378 163 aa4.5□□□□□ -1.69
TCF4-260ENST00000627685 HIST1H2BKO60814 126 aa4.5□□□□□ -1.69
TCF4-260ENST00000627685 HIST1H2BJP06899 126 aa4.5□□□□□ -1.69
TCF4-260ENST00000627685 HIST1H2BOP23527 126 aa4.5□□□□□ -1.69
TCF4-260ENST00000627685 HIST1H2BBP33778 126 aa4.5□□□□□ -1.69
TCF4-260ENST00000627685 HIST1H2BDP58876 126 aa4.5□□□□□ -1.69
TCF4-260ENST00000627685 HIST1H2BCP62807 126 aa4.5□□□□□ -1.69
TCF4-260ENST00000627685 HIST2H2BEQ16778 126 aa4.5□□□□□ -1.69
TCF4-260ENST00000627685 KRTAP13-2Q52LG2 175 aa4.5□□□□□ -1.69
TCF4-260ENST00000627685 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.5□□□□□ -1.69
TCF4-260ENST00000627685 HIST1H2BHQ93079 126 aa4.5□□□□□ -1.69
TCF4-260ENST00000627685 HIST1H2BNQ99877 126 aa4.5□□□□□ -1.69
TCF4-260ENST00000627685 HIST1H2BMQ99879 126 aa4.5□□□□□ -1.69
TCF4-260ENST00000627685 GAGE10A6NGK3 116 aa4.49□□□□□ -1.69
TCF4-260ENST00000627685 KRTAP4-16G5E9R7 235 aaPredicted RBP4.49□□□□□ -1.69
TCF4-260ENST00000627685 HSBP1O75506 76 aa4.49□□□□□ -1.69
TCF4-260ENST00000627685 PFN2P35080 140 aa4.49□□□□□ -1.69
TCF4-260ENST00000627685 NDUFA6P56556 154 aa4.49□□□□□ -1.69
TCF4-260ENST00000627685 TMEM170BQ5T4T1 132 aa4.49□□□□□ -1.69
TCF4-260ENST00000627685 NKAPP1Q8N9T2 125 aa4.49□□□□□ -1.69
TCF4-260ENST00000627685 TMEM238C9JI98 176 aa4.48□□□□□ -1.69
TCF4-260ENST00000627685 RPL24P83731 157 aaKnown RBP4.48□□□□□ -1.69
TCF4-260ENST00000627685 PMCHL2Q9BQD1 86 aa4.48□□□□□ -1.69
TCF4-260ENST00000627685 IGKV2-28A0A075B6P5 120 aa4.47□□□□□ -1.69
TCF4-260ENST00000627685 IGKV2D-28P01615 120 aa4.47□□□□□ -1.69
TCF4-260ENST00000627685 SPRR1AP35321 89 aa4.47□□□□□ -1.69
TCF4-260ENST00000627685 COA6Q5JTJ3 125 aaKnown RBP4.47□□□□□ -1.69
TCF4-260ENST00000627685 SOSTDC1Q6X4U4 206 aa4.47□□□□□ -1.69
TCF4-260ENST00000627685 TMEM126AQ9H061 195 aa4.47□□□□□ -1.69
TCF4-260ENST00000627685 LOC107984156A0A0G2JMH3 177 aa4.46□□□□□ -1.7
TCF4-260ENST00000627685 LEPROTL1O95214 131 aa4.46□□□□□ -1.7
TCF4-260ENST00000627685 SMIM13P0DJ93 91 aa4.46□□□□□ -1.7
TCF4-260ENST00000627685 CRYGAP11844 174 aa4.46□□□□□ -1.7
TCF4-260ENST00000627685 PRLHP81277 87 aa4.46□□□□□ -1.7
TCF4-260ENST00000627685 ARL17AQ8IVW1 177 aa4.46□□□□□ -1.7
TCF4-260ENST00000627685 LITAFQ99732 161 aa4.46□□□□□ -1.7
TCF4-260ENST00000627685 ANAPC11Q9NYG5 84 aa4.46□□□□□ -1.7
TCF4-260ENST00000627685 UBE2AP49459 152 aa4.45□□□□□ -1.7
TCF4-260ENST00000627685 CTAG1AP78358 180 aa4.45□□□□□ -1.7
TCF4-260ENST00000627685 FAM229BQ4G0N7 80 aa4.45□□□□□ -1.7
TCF4-260ENST00000627685 MIR7-3HGQ8N6C7 128 aa4.45□□□□□ -1.7
TCF4-260ENST00000627685 NDUFA12Q9UI09 145 aa4.45□□□□□ -1.7
TCF4-260ENST00000627685 A0A0U1RRA0 63 aa4.44□□□□□ -1.7
TCF4-260ENST00000627685 LINC00587B1AMM8 73 aa4.44□□□□□ -1.7
TCF4-260ENST00000627685 LEPROTO15243 131 aa4.44□□□□□ -1.7
TCF4-260ENST00000627685 HERV-K104P63124 156 aa4.44□□□□□ -1.7
TCF4-260ENST00000627685 LINC01545Q5VT33 79 aa4.44□□□□□ -1.7
TCF4-260ENST00000627685 IGKV2D-26A0A0A0MRZ7 120 aa4.43□□□□□ -1.7
TCF4-260ENST00000627685 H0Y8G0 127 aa4.43□□□□□ -1.7
TCF4-260ENST00000627685 SYS1-DBNDD2H3BUS1 97 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms