RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 SDIM1Q6ZPB5 146 aa4.99□□□□□ -1.61
CTNNA1-244ENST00000627109 TRAV13-2A0A0B4J235 113 aa4.98□□□□□ -1.61
CTNNA1-244ENST00000627109 A0A1B0GUV1 79 aa4.98□□□□□ -1.61
CTNNA1-244ENST00000627109 ANGP03950 147 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-244ENST00000627109 Q6Q795 121 aa4.98□□□□□ -1.61
CTNNA1-244ENST00000627109 C22orf24Q9Y442 160 aa4.98□□□□□ -1.61
CTNNA1-244ENST00000627109 TRACP01848 142 aa4.97□□□□□ -1.61
CTNNA1-244ENST00000627109 TGP01266 2768 aa4.97□□□□□ -1.61
CTNNA1-244ENST00000627109 NDUFS5O43920 106 aa4.97□□□□□ -1.61
CTNNA1-244ENST00000627109 RPL28P46779 137 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-244ENST00000627109 DAD1P61803 113 aa4.96□□□□□ -1.62
CTNNA1-244ENST00000627109 LECT2O14960 151 aa4.96□□□□□ -1.62
CTNNA1-244ENST00000627109 SLPIP03973 132 aa4.96□□□□□ -1.62
CTNNA1-244ENST00000627109 IGKV2-28A0A075B6P5 120 aa4.95□□□□□ -1.62
CTNNA1-244ENST00000627109 IBA57-AS1B1ANH7 110 aa4.95□□□□□ -1.62
CTNNA1-244ENST00000627109 IGKV2D-28P01615 120 aa4.95□□□□□ -1.62
CTNNA1-244ENST00000627109 NDUFV3P56181 108 aaKnown RBP4.95□□□□□ -1.62
CTNNA1-244ENST00000627109 LINC00269Q8N2A0 174 aa4.95□□□□□ -1.62
CTNNA1-244ENST00000627109 WFDC9Q8NEX5 89 aa4.95□□□□□ -1.62
CTNNA1-244ENST00000627109 LINC00959A0A1B0GUT2 108 aa4.94□□□□□ -1.62
CTNNA1-244ENST00000627109 CCL18P55774 89 aa4.94□□□□□ -1.62
CTNNA1-244ENST00000627109 PRO0255Q9UI72 69 aa4.94□□□□□ -1.62
CTNNA1-244ENST00000627109 LINC00337Q8N6G1 96 aa4.94□□□□□ -1.62
CTNNA1-244ENST00000627109 SMIM11BQ8TCY0 68 aa4.94□□□□□ -1.62
CTNNA1-244ENST00000627109 LINC00526Q96FQ7 95 aa4.94□□□□□ -1.62
CTNNA1-244ENST00000627109 STAB2Q8WWQ8 2551 aa4.94□□□□□ -1.62
CTNNA1-244ENST00000627109 PRR3P79522 188 aaKnown RBP4.94□□□□□ -1.62
CTNNA1-244ENST00000627109 OBSCN-AS1Q96MR7 158 aa4.94□□□□□ -1.62
CTNNA1-244ENST00000627109 FAM218AQ96MZ4 157 aa4.94□□□□□ -1.62
CTNNA1-244ENST00000627109 C14orf132Q9NPU4 83 aa4.94□□□□□ -1.62
CTNNA1-244ENST00000627109 Q8IZM0 81 aa4.93□□□□□ -1.62
CTNNA1-244ENST00000627109 KRTAP10-11P60412 298 aa4.93□□□□□ -1.62
CTNNA1-244ENST00000627109 A0A087WYN8 130 aa4.92□□□□□ -1.62
CTNNA1-244ENST00000627109 IGHV4-28A0A0C4DH34 117 aa4.92□□□□□ -1.62
CTNNA1-244ENST00000627109 KRTAP21-3Q3LHN1 58 aa4.92□□□□□ -1.62
CTNNA1-244ENST00000627109 TRBV7-7A0A0K0K1E9 115 aa4.92□□□□□ -1.62
CTNNA1-244ENST00000627109 ACYP1P07311 99 aa4.92□□□□□ -1.62
CTNNA1-244ENST00000627109 C9orf116Q5BN46 136 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-244ENST00000627109 LINC00167Q96N53 147 aa4.92□□□□□ -1.62
CTNNA1-244ENST00000627109 RBM12B-AS1Q9P1G2 102 aa4.92□□□□□ -1.62
CTNNA1-244ENST00000627109 DNHD1Q96M86 4753 aa4.92□□□□□ -1.62
CTNNA1-244ENST00000627109 NCR3O14931 201 aa4.92□□□□□ -1.62
CTNNA1-244ENST00000627109 Q8N3U1 123 aa4.92□□□□□ -1.62
CTNNA1-244ENST00000627109 IGKV3D-7A0A0C4DH55 119 aa4.91□□□□□ -1.62
CTNNA1-244ENST00000627109 IGHV4-30-4P0DP06 118 aa4.91□□□□□ -1.62
CTNNA1-244ENST00000627109 KIAA0087Q14695 138 aa4.91□□□□□ -1.62
CTNNA1-244ENST00000627109 CHCHD10Q8WYQ3 142 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-244ENST00000627109 KLK12Q9UKR0 248 aa4.91□□□□□ -1.62
CTNNA1-244ENST00000627109 H0YGX0 51 aa4.9□□□□□ -1.62
CTNNA1-244ENST00000627109 NHLRC4P0CG21 123 aaPredicted RBP4.9□□□□□ -1.62
CTNNA1-244ENST00000627109 HIST1H4AP62805 103 aaKnown RBP4.9□□□□□ -1.62
CTNNA1-244ENST00000627109 COX17Q14061 63 aa4.9□□□□□ -1.62
CTNNA1-244ENST00000627109 DNAH3Q8TD57 4116 aa4.9□□□□□ -1.63
CTNNA1-244ENST00000627109 Q8NAQ8 132 aa4.9□□□□□ -1.63
CTNNA1-244ENST00000627109 MUC7Q8TAX7 377 aa4.9□□□□□ -1.63
CTNNA1-244ENST00000627109 ORMDL1Q9P0S3 153 aa4.89□□□□□ -1.63
CTNNA1-244ENST00000627109 IMUPQ9GZP8 106 aa4.89□□□□□ -1.63
CTNNA1-244ENST00000627109 CXCL5P42830 114 aa4.89□□□□□ -1.63
CTNNA1-244ENST00000627109 RPL18AQ02543 176 aaKnown RBP4.89□□□□□ -1.63
CTNNA1-244ENST00000627109 LAMTOR3Q9UHA4 124 aa4.89□□□□□ -1.63
CTNNA1-244ENST00000627109 A0A1B0GX51 115 aa4.88□□□□□ -1.63
CTNNA1-244ENST00000627109 SPAG11BQ08648 103 aa4.88□□□□□ -1.63
CTNNA1-244ENST00000627109 LINC00643Q86TS7 51 aa4.88□□□□□ -1.63
CTNNA1-244ENST00000627109 CELA1Q9UNI1 258 aa4.88□□□□□ -1.63
CTNNA1-244ENST00000627109 CMYA5Q8N3K9 4069 aa4.88□□□□□ -1.63
CTNNA1-244ENST00000627109 K7EIL1 84 aa4.88□□□□□ -1.63
CTNNA1-244ENST00000627109 NANOS2P60321 138 aaKnown RBP4.88□□□□□ -1.63
CTNNA1-244ENST00000627109 SPART-AS1P0CW21 52 aa4.88□□□□□ -1.63
CTNNA1-244ENST00000627109 MIFP14174 115 aa4.88□□□□□ -1.63
CTNNA1-244ENST00000627109 C6orf99Q4VX62 202 aa4.88□□□□□ -1.63
CTNNA1-244ENST00000627109 PRR34Q9NV39 138 aa4.88□□□□□ -1.63
CTNNA1-244ENST00000627109 C8orf87E5RJ46 101 aa4.87□□□□□ -1.63
CTNNA1-244ENST00000627109 RBM3P98179 157 aaKnown RBP4.87□□□□□ -1.63
CTNNA1-244ENST00000627109 C6orf223Q8N319 242 aa4.87□□□□□ -1.63
CTNNA1-244ENST00000627109 XAGE1AQ9HD64 81 aa4.87□□□□□ -1.63
CTNNA1-244ENST00000627109 UNQ6190/PRO20217Q6UXQ8 127 aa4.86□□□□□ -1.63
CTNNA1-244ENST00000627109 SMCR5Q8TEV8 140 aa4.86□□□□□ -1.63
CTNNA1-244ENST00000627109 KLK5Q9Y337 293 aaPredicted RBP4.86□□□□□ -1.63
CTNNA1-244ENST00000627109 HIGD2BQ4VC39 106 aa4.86□□□□□ -1.63
CTNNA1-244ENST00000627109 GVQW2A0A096LPI5 108 aaPredicted RBP4.86□□□□□ -1.63
CTNNA1-244ENST00000627109 FBN3Q75N90 2809 aa4.85□□□□□ -1.63
CTNNA1-244ENST00000627109 A0A0J9YWU9 116 aa4.85□□□□□ -1.63
CTNNA1-244ENST00000627109 H3BNG1 76 aa4.85□□□□□ -1.63
CTNNA1-244ENST00000627109 MP68P56378 58 aa4.85□□□□□ -1.63
CTNNA1-244ENST00000627109 C9orf129Q5T035 196 aaKnown RBP4.85□□□□□ -1.63
CTNNA1-244ENST00000627109 TENM3Q9P273 2699 aa4.85□□□□□ -1.63
CTNNA1-244ENST00000627109 LELP1Q5T871 98 aa4.85□□□□□ -1.63
CTNNA1-244ENST00000627109 EGFEM1PQ0D2K5 195 aa4.84□□□□□ -1.63
CTNNA1-244ENST00000627109 A0A087WVE0 104 aa4.84□□□□□ -1.64
CTNNA1-244ENST00000627109 PRAC1Q96KF2 57 aa4.84□□□□□ -1.64
CTNNA1-244ENST00000627109 DSCR8Q96T75 97 aa4.84□□□□□ -1.64
CTNNA1-244ENST00000627109 FAM30AQ9NZY2 134 aa4.84□□□□□ -1.64
CTNNA1-244ENST00000627109 C10orf25Q5T742 122 aa4.83□□□□□ -1.64
CTNNA1-244ENST00000627109 A6NED7 52 aa4.83□□□□□ -1.64
CTNNA1-244ENST00000627109 CAMK2N2Q96S95 79 aa4.83□□□□□ -1.64
CTNNA1-244ENST00000627109 LINC00846Q9NV44 126 aa4.83□□□□□ -1.64
CTNNA1-244ENST00000627109 DNAH1Q9P2D7 4330 aa4.83□□□□□ -1.64
CTNNA1-244ENST00000627109 HAMPP81172 84 aa4.83□□□□□ -1.64
CTNNA1-244ENST00000627109 Q8NDZ9 215 aa4.83□□□□□ -1.64
CTNNA1-244ENST00000627109 KRTAP26-1Q6PEX3 210 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms