RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.46□□□□□ -0.73
PMS1-221ENST00000624204 LINC00575Q6W349 94 aa10.46□□□□□ -0.73
PMS1-221ENST00000624204 Q6ZQY7 126 aa10.46□□□□□ -0.73
PMS1-221ENST00000624204 HTN3P15516 51 aa10.46□□□□□ -0.74
PMS1-221ENST00000624204 Q8IZM0 81 aa10.46□□□□□ -0.74
PMS1-221ENST00000624204 XAGE1AQ9HD64 81 aa10.45□□□□□ -0.74
PMS1-221ENST00000624204 ITPR3Q14573 2671 aa10.45□□□□□ -0.74
PMS1-221ENST00000624204 FLNAP21333 2647 aaKnown RBP10.45□□□□□ -0.74
PMS1-221ENST00000624204 GYPEP15421 78 aa10.44□□□□□ -0.74
PMS1-221ENST00000624204 C6orf223Q8N319 242 aa10.44□□□□□ -0.74
PMS1-221ENST00000624204 IGHV4-28A0A0C4DH34 117 aa10.44□□□□□ -0.74
PMS1-221ENST00000624204 MIFP14174 115 aa10.44□□□□□ -0.74
PMS1-221ENST00000624204 ANGP03950 147 aaKnown RBP10.43□□□□□ -0.74
PMS1-221ENST00000624204 Q8NDZ9 215 aa10.43□□□□□ -0.74
PMS1-221ENST00000624204 BCE1O60756 84 aa10.42□□□□□ -0.74
PMS1-221ENST00000624204 C16orf74Q96GX8 76 aa10.42□□□□□ -0.74
PMS1-221ENST00000624204 LINC01356Q8N9X3 169 aa10.42□□□□□ -0.74
PMS1-221ENST00000624204 C4orf3Q8WVX3 66 aa10.42□□□□□ -0.74
PMS1-221ENST00000624204 PRR4Q16378 134 aa10.41□□□□□ -0.74
PMS1-221ENST00000624204 LOC110117498A0A087WWA1 95 aa10.41□□□□□ -0.74
PMS1-221ENST00000624204 PLAC8L1A1L4L8 177 aa10.4□□□□□ -0.74
PMS1-221ENST00000624204 NREPQ16612 68 aa10.4□□□□□ -0.74
PMS1-221ENST00000624204 Q6YL49 198 aa10.39□□□□□ -0.75
PMS1-221ENST00000624204 NDUFC1O43677 76 aa10.39□□□□□ -0.75
PMS1-221ENST00000624204 CXCL6P80162 114 aa10.39□□□□□ -0.75
PMS1-221ENST00000624204 DEFB105AQ8NG35 78 aa10.39□□□□□ -0.75
PMS1-221ENST00000624204 MUC7Q8TAX7 377 aa10.39□□□□□ -0.75
PMS1-221ENST00000624204 TMEM254Q8TBM7 123 aa10.39□□□□□ -0.75
PMS1-221ENST00000624204 CELA1Q9UNI1 258 aa10.38□□□□□ -0.75
PMS1-221ENST00000624204 C3orf84H3BNL1 204 aa10.38□□□□□ -0.75
PMS1-221ENST00000624204 FAM229BQ4G0N7 80 aa10.38□□□□□ -0.75
PMS1-221ENST00000624204 UNQ6190/PRO20217Q6UXQ8 127 aa10.38□□□□□ -0.75
PMS1-221ENST00000624204 TRBV7-4A0A0J9YYF1 115 aa10.37□□□□□ -0.75
PMS1-221ENST00000624204 GIG44P09565 113 aaPredicted RBP10.37□□□□□ -0.75
PMS1-221ENST00000624204 BPY2O14599 106 aa10.37□□□□□ -0.75
PMS1-221ENST00000624204 C10orf25Q5T742 122 aa10.37□□□□□ -0.75
PMS1-221ENST00000624204 C1orf195Q5TG92 126 aa10.37□□□□□ -0.75
PMS1-221ENST00000624204 KIAA0087Q14695 138 aa10.35□□□□□ -0.75
PMS1-221ENST00000624204 LINC01006Q8NI28 216 aa10.35□□□□□ -0.75
PMS1-221ENST00000624204 IGSF10Q6WRI0 2623 aa10.35□□□□□ -0.75
PMS1-221ENST00000624204 CHCHD10Q8WYQ3 142 aaPredicted RBP10.35□□□□□ -0.75
PMS1-221ENST00000624204 BAHCC1Q9P281 2608 aa10.35□□□□□ -0.75
PMS1-221ENST00000624204 COX17Q14061 63 aa10.35□□□□□ -0.75
PMS1-221ENST00000624204 BBC3Q96PG8 261 aaPredicted RBP10.35□□□□□ -0.75
PMS1-221ENST00000624204 PDE6GP18545 87 aa10.34□□□□□ -0.75
PMS1-221ENST00000624204 CCL24O00175 119 aa10.33□□□□□ -0.76
PMS1-221ENST00000624204 ATP5EP56381 51 aaPredicted RBP10.33□□□□□ -0.76
PMS1-221ENST00000624204 V9GYY9 64 aa10.33□□□□□ -0.76
PMS1-221ENST00000624204 PDZD2O15018 2839 aa10.32□□□□□ -0.76
PMS1-221ENST00000624204 CD164L2Q6UWJ8 174 aa10.32□□□□□ -0.76
PMS1-221ENST00000624204 USP24Q9UPU5 2620 aa10.31□□□□□ -0.76
PMS1-221ENST00000624204 F8WDY8 70 aa10.3□□□□□ -0.76
PMS1-221ENST00000624204 FUSP35637 526 aaKnown RBP eCLIP10.3□□□□□ -0.76
PMS1-221ENST00000624204 A0A1B0GUV1 79 aa10.3□□□□□ -0.76
PMS1-221ENST00000624204 C9orf66Q5T8R8 295 aa10.3□□□□□ -0.76
PMS1-221ENST00000624204 DIRC1Q969H9 104 aa10.29□□□□□ -0.76
PMS1-221ENST00000624204 REG3AQ06141 175 aa10.29□□□□□ -0.76
PMS1-221ENST00000624204 SPAG11BQ08648 103 aa10.29□□□□□ -0.76
PMS1-221ENST00000624204 TEP1Q99973 2627 aaKnown RBP10.29□□□□□ -0.76
PMS1-221ENST00000624204 PRYO14603 147 aa10.29□□□□□ -0.76
PMS1-221ENST00000624204 HIGD2BQ4VC39 106 aa10.29□□□□□ -0.76
PMS1-221ENST00000624204 HIGD2AQ9BW72 106 aa10.29□□□□□ -0.76
PMS1-221ENST00000624204 FAM30AQ9NZY2 134 aa10.29□□□□□ -0.76
PMS1-221ENST00000624204 VWFP04275 2813 aa10.28□□□□□ -0.76
PMS1-221ENST00000624204 HIVEP1P15822 2718 aa10.28□□□□□ -0.76
PMS1-221ENST00000624204 ESRGQ1W209 222 aa10.27□□□□□ -0.77
PMS1-221ENST00000624204 KLK12Q9UKR0 248 aa10.27□□□□□ -0.77
PMS1-221ENST00000624204 DSCR9P59020 149 aa10.26□□□□□ -0.77
PMS1-221ENST00000624204 SEC61GP60059 68 aa10.26□□□□□ -0.77
PMS1-221ENST00000624204 CYSRT1A8MQ03 144 aa10.26□□□□□ -0.77
PMS1-221ENST00000624204 UBR5O95071 2799 aaPredicted RBP10.26□□□□□ -0.77
PMS1-221ENST00000624204 IGLV6-57P01721 117 aa10.26□□□□□ -0.77
PMS1-221ENST00000624204 PSPHP1O15172 72 aa10.25□□□□□ -0.77
PMS1-221ENST00000624204 COX7BP24311 80 aa10.24□□□□□ -0.77
PMS1-221ENST00000624204 CSNK1G2-AS1Q8NCQ2 148 aa10.24□□□□□ -0.77
PMS1-221ENST00000624204 ZNF469Q96JG9 3925 aaPredicted RBP10.24□□□□□ -0.77
PMS1-221ENST00000624204 ZNF73O43830 326 aaPredicted RBP10.24□□□□□ -0.77
PMS1-221ENST00000624204 PRO0255Q9UI72 69 aa10.23□□□□□ -0.77
PMS1-221ENST00000624204 KRTAP10-9P60411 292 aa10.22□□□□□ -0.77
PMS1-221ENST00000624204 ATRQ13535 2644 aa10.22□□□□□ -0.77
PMS1-221ENST00000624204 IGHV4-31P0DP07 118 aa10.21□□□□□ -0.77
PMS1-221ENST00000624204 IGKV4-1P06312 121 aa10.21□□□□□ -0.78
PMS1-221ENST00000624204 H3BQ85 93 aa10.2□□□□□ -0.78
PMS1-221ENST00000624204 OCR1Q9BZK8 76 aa10.2□□□□□ -0.78
PMS1-221ENST00000624204 FSHBP01225 129 aa10.19□□□□□ -0.78
PMS1-221ENST00000624204 DEFB135Q30KP9 77 aa10.19□□□□□ -0.78
PMS1-221ENST00000624204 PKD1L1Q8TDX9 2849 aa10.19□□□□□ -0.78
PMS1-221ENST00000624204 ERC2-IT1O76042 136 aa10.19□□□□□ -0.78
PMS1-221ENST00000624204 CMC4P56277 68 aaPredicted RBP10.18□□□□□ -0.78
PMS1-221ENST00000624204 DEFB116Q30KQ4 102 aa10.18□□□□□ -0.78
PMS1-221ENST00000624204 Q6ZTC4 211 aa10.17□□□□□ -0.78
PMS1-221ENST00000624204 C19orf73Q9NVV2 129 aa10.17□□□□□ -0.78
PMS1-221ENST00000624204 ELOF1P60002 83 aaKnown RBP10.15□□□□□ -0.78
PMS1-221ENST00000624204 SMIM29Q86T20 159 aa10.14□□□□□ -0.79
PMS1-221ENST00000624204 A0A0J9YWU9 116 aa10.14□□□□□ -0.79
PMS1-221ENST00000624204 IGHV4-30-4P0DP06 118 aa10.14□□□□□ -0.79
PMS1-221ENST00000624204 C6orf48Q9UBA6 75 aa10.14□□□□□ -0.79
PMS1-221ENST00000624204 IGLV1-51P01701 117 aa10.13□□□□□ -0.79
PMS1-221ENST00000624204 DNAJC9-AS1A6NH13 148 aa10.12□□□□□ -0.79
PMS1-221ENST00000624204 A0A0G2JQZ4 141 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms