RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 UNQ9165/PRO28630Q6UXU0 137 aa4.03□□□□□ -1.77
EBF1-211ENST00000622875 IGHV1-8P0DP01 117 aa4.02□□□□□ -1.77
EBF1-211ENST00000622875 RPL39P5Q59GN2 51 aa4.02□□□□□ -1.77
EBF1-211ENST00000622875 NDUFA1O15239 70 aa4.02□□□□□ -1.77
EBF1-211ENST00000622875 KRTAP27-1Q3LI81 207 aa4.02□□□□□ -1.77
EBF1-211ENST00000622875 LINC00308Q8TCZ7 52 aa4.02□□□□□ -1.77
EBF1-211ENST00000622875 TRBV6-5A0A0K0K1A5 114 aa4.01□□□□□ -1.77
EBF1-211ENST00000622875 CLPSP04118 112 aa4.01□□□□□ -1.77
EBF1-211ENST00000622875 ZNRF1Q8ND25 227 aa4.01□□□□□ -1.77
EBF1-211ENST00000622875 TMEM167AQ8TBQ9 72 aa4.01□□□□□ -1.77
EBF1-211ENST00000622875 GNRH2O43555 120 aa4.01□□□□□ -1.77
EBF1-211ENST00000622875 SUMO4Q6EEV6 95 aa4.01□□□□□ -1.77
EBF1-211ENST00000622875 ZNF833PQ6ZTB9 187 aa4.01□□□□□ -1.77
EBF1-211ENST00000622875 SMCR5Q8TEV8 140 aa4.01□□□□□ -1.77
EBF1-211ENST00000622875 IGHV3-48P01763 117 aa4.01□□□□□ -1.77
EBF1-211ENST00000622875 IGKV1-12A0A0C4DH73 117 aa4.01□□□□□ -1.77
EBF1-211ENST00000622875 ETDCA0A1B0GVM5 59 aa4.01□□□□□ -1.77
EBF1-211ENST00000622875 ATP6V0E1O15342 81 aa4.01□□□□□ -1.77
EBF1-211ENST00000622875 IGKV1D-12P01611 117 aa4.01□□□□□ -1.77
EBF1-211ENST00000622875 CNFNQ9BYD5 112 aa4.01□□□□□ -1.77
EBF1-211ENST00000622875 Q75L30 129 aa4□□□□□ -1.77
EBF1-211ENST00000622875 IGKV1-6A0A0C4DH72 117 aa4□□□□□ -1.77
EBF1-211ENST00000622875 NCR3O14931 201 aa4□□□□□ -1.77
EBF1-211ENST00000622875 P0C879 139 aa4□□□□□ -1.77
EBF1-211ENST00000622875 RNASE4P34096 147 aaKnown RBP4□□□□□ -1.77
EBF1-211ENST00000622875 IGKV1D-17A0A075B6S4 117 aa4□□□□□ -1.77
EBF1-211ENST00000622875 IGHV1-3A0A0C4DH29 117 aa4□□□□□ -1.77
EBF1-211ENST00000622875 IGLV3-1P01715 115 aa4□□□□□ -1.77
EBF1-211ENST00000622875 LINC01547P58512 204 aaPredicted RBP4□□□□□ -1.77
EBF1-211ENST00000622875 BRD3OSQ6XYD6 125 aa4□□□□□ -1.77
EBF1-211ENST00000622875 CAMK2N2Q96S95 79 aa4□□□□□ -1.77
EBF1-211ENST00000622875 H3BRN7 92 aa3.99□□□□□ -1.77
EBF1-211ENST00000622875 C14orf178Q8N769 122 aaPredicted RBP3.99□□□□□ -1.77
EBF1-211ENST00000622875 NDUFA4O00483 81 aa3.99□□□□□ -1.77
EBF1-211ENST00000622875 Q8N2B8 174 aa3.99□□□□□ -1.77
EBF1-211ENST00000622875 MIR7-3HGQ8N6C7 128 aa3.99□□□□□ -1.77
EBF1-211ENST00000622875 LEAP2Q969E1 77 aa3.99□□□□□ -1.77
EBF1-211ENST00000622875 TOMM7Q9P0U1 55 aa3.99□□□□□ -1.77
EBF1-211ENST00000622875 LRCOL1A6NCL2 159 aa3.98□□□□□ -1.77
EBF1-211ENST00000622875 Q6ZS46 218 aa3.98□□□□□ -1.77
EBF1-211ENST00000622875 NOTCH2NLQ7Z3S9 236 aa3.98□□□□□ -1.77
EBF1-211ENST00000622875 IGKV2-40A0A087WW87 121 aaPredicted RBP3.98□□□□□ -1.77
EBF1-211ENST00000622875 IGKV2D-40P01614 121 aaPredicted RBP3.98□□□□□ -1.77
EBF1-211ENST00000622875 KLF14Q8TD94 323 aaPredicted RBP3.98□□□□□ -1.77
EBF1-211ENST00000622875 COX7B2Q8TF08 81 aa3.98□□□□□ -1.77
EBF1-211ENST00000622875 LRP1BQ9NZR2 4599 aa3.98□□□□□ -1.77
EBF1-211ENST00000622875 IGKV3-7A0A075B6H7 116 aa3.98□□□□□ -1.77
EBF1-211ENST00000622875 IGHV1-18A0A0C4DH31 117 aa3.98□□□□□ -1.77
EBF1-211ENST00000622875 HTN1P15515 57 aa3.98□□□□□ -1.77
EBF1-211ENST00000622875 DEFB114Q30KQ6 69 aa3.98□□□□□ -1.77
EBF1-211ENST00000622875 IGKV1-27A0A075B6S5 117 aa3.97□□□□□ -1.77
EBF1-211ENST00000622875 TRAV10A0A0B4J240 114 aa3.97□□□□□ -1.77
EBF1-211ENST00000622875 LY6EQ16553 131 aa3.97□□□□□ -1.77
EBF1-211ENST00000622875 RNF185Q96GF1 192 aa3.97□□□□□ -1.77
EBF1-211ENST00000622875 KRTAP16-1A8MUX0 517 aa3.97□□□□□ -1.77
EBF1-211ENST00000622875 E7EUB6 86 aa3.97□□□□□ -1.77
EBF1-211ENST00000622875 C11orf72Q8NBR9 251 aa3.97□□□□□ -1.77
EBF1-211ENST00000622875 RNF5Q99942 180 aa3.97□□□□□ -1.77
EBF1-211ENST00000622875 PSCAO43653 123 aa3.97□□□□□ -1.77
EBF1-211ENST00000622875 KLK9Q9UKQ9 250 aa3.97□□□□□ -1.77
EBF1-211ENST00000622875 LYPD5Q6UWN5 251 aa3.96□□□□□ -1.77
EBF1-211ENST00000622875 IGHV4-4A0A075B6R2 117 aa3.96□□□□□ -1.78
EBF1-211ENST00000622875 IGHV7-81A0A0B4J1V7 117 aa3.96□□□□□ -1.78
EBF1-211ENST00000622875 IGHV4-59P01825 116 aa3.96□□□□□ -1.78
EBF1-211ENST00000622875 NTM-AS1Q6ZSK4 140 aa3.96□□□□□ -1.78
EBF1-211ENST00000622875 C1orf64Q8NEQ6 169 aa3.96□□□□□ -1.78
EBF1-211ENST00000622875 NDUFA4L2Q9NRX3 87 aa3.96□□□□□ -1.78
EBF1-211ENST00000622875 IGHV3-73A0A0B4J1V6 119 aa3.96□□□□□ -1.78
EBF1-211ENST00000622875 LINC01548A6NM66 108 aa3.96□□□□□ -1.78
EBF1-211ENST00000622875 IGLV1-44P01699 117 aa3.96□□□□□ -1.78
EBF1-211ENST00000622875 ZNF491Q8N8L2 437 aa3.96□□□□□ -1.78
EBF1-211ENST00000622875 C20orf203Q8NBC4 194 aa3.96□□□□□ -1.78
EBF1-211ENST00000622875 NACAE9PAV3 2078 aa3.96□□□□□ -1.78
EBF1-211ENST00000622875 SRRM2Q9UQ35 2752 aaKnown RBP3.96□□□□□ -1.78
EBF1-211ENST00000622875 REG3AQ06141 175 aa3.96□□□□□ -1.78
EBF1-211ENST00000622875 PLA2G2DQ9UNK4 145 aa3.96□□□□□ -1.78
EBF1-211ENST00000622875 IGLV5-45A0A087WSX0 123 aa3.95□□□□□ -1.78
EBF1-211ENST00000622875 IGKV3D-15A0A087WSY6 115 aa3.95□□□□□ -1.78
EBF1-211ENST00000622875 H0Y9P7 68 aa3.95□□□□□ -1.78
EBF1-211ENST00000622875 IGKV3-15P01624 115 aa3.95□□□□□ -1.78
EBF1-211ENST00000622875 LOC110117498A0A087WWA1 95 aa3.95□□□□□ -1.78
EBF1-211ENST00000622875 IGKV1-16P04430 117 aa3.95□□□□□ -1.78
EBF1-211ENST00000622875 ADAMTSL4-AS1Q5T5F5 129 aa3.95□□□□□ -1.78
EBF1-211ENST00000622875 SPANXA2-OT1Q8N9U9 137 aa3.95□□□□□ -1.78
EBF1-211ENST00000622875 IGIPA6NJ69 53 aa3.95□□□□□ -1.78
EBF1-211ENST00000622875 TSPEAR-AS2P59090 65 aa3.95□□□□□ -1.78
EBF1-211ENST00000622875 LINC00322Q6ZN03 302 aaPredicted RBP3.94□□□□□ -1.78
EBF1-211ENST00000622875 Q9BRP9 147 aa3.94□□□□□ -1.78
EBF1-211ENST00000622875 KIF25-AS1Q9Y6Z4 181 aa3.94□□□□□ -1.78
EBF1-211ENST00000622875 IGHV3-74A0A0B4J1X5 117 aa3.94□□□□□ -1.78
EBF1-211ENST00000622875 ZNF503-AS2A6NEH8 195 aa3.94□□□□□ -1.78
EBF1-211ENST00000622875 Q8N9L7 120 aa3.94□□□□□ -1.78
EBF1-211ENST00000622875 TRGV2A0A075B6R0 118 aa3.94□□□□□ -1.78
EBF1-211ENST00000622875 FAM229AH3BQW9 127 aa3.94□□□□□ -1.78
EBF1-211ENST00000622875 CRCT1Q9UGL9 99 aa3.94□□□□□ -1.78
EBF1-211ENST00000622875 PKHD1L1Q86WI1 4243 aa3.93□□□□□ -1.78
EBF1-211ENST00000622875 IGHV3-49A0A0A0MS15 119 aa3.93□□□□□ -1.78
EBF1-211ENST00000622875 IGHV3-16A0A0C4DH30 117 aa3.93□□□□□ -1.78
EBF1-211ENST00000622875 PRR3P79522 188 aaKnown RBP3.93□□□□□ -1.78
EBF1-211ENST00000622875 CRIP3Q6Q6R5 217 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms