RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 IGKV2-28A0A075B6P5 120 aa6.33□□□□□ -1.4
LINC00963-214ENST00000622680 IGKV2D-28P01615 120 aa6.33□□□□□ -1.4
LINC00963-214ENST00000622680 NPSP0C0P6 89 aa6.33□□□□□ -1.4
LINC00963-214ENST00000622680 CXCL5P42830 114 aa6.33□□□□□ -1.4
LINC00963-214ENST00000622680 SEC11AP67812 179 aa6.33□□□□□ -1.4
LINC00963-214ENST00000622680 PRLHP81277 87 aa6.33□□□□□ -1.4
LINC00963-214ENST00000622680 PMVKQ15126 192 aa6.33□□□□□ -1.4
LINC00963-214ENST00000622680 NKAPP1Q8N9T2 125 aa6.33□□□□□ -1.4
LINC00963-214ENST00000622680 CST9LQ9H4G1 147 aa6.33□□□□□ -1.4
LINC00963-214ENST00000622680 IGLV7-46A0A075B6I9 117 aa6.32□□□□□ -1.4
LINC00963-214ENST00000622680 FABP4P15090 132 aa6.32□□□□□ -1.4
LINC00963-214ENST00000622680 FAM229BQ4G0N7 80 aa6.32□□□□□ -1.4
LINC00963-214ENST00000622680 COX7B2Q8TF08 81 aa6.32□□□□□ -1.4
LINC00963-214ENST00000622680 IGLV5-37A0A075B6J1 123 aa6.31□□□□□ -1.4
LINC00963-214ENST00000622680 A0A096LNJ9 63 aa6.31□□□□□ -1.4
LINC00963-214ENST00000622680 SPINK8P0C7L1 97 aa6.31□□□□□ -1.4
LINC00963-214ENST00000622680 PDZD11Q5EBL8 140 aa6.31□□□□□ -1.4
LINC00963-214ENST00000622680 IGKV2D-26A0A0A0MRZ7 120 aa6.3□□□□□ -1.4
LINC00963-214ENST00000622680 H3BRM9 83 aa6.3□□□□□ -1.4
LINC00963-214ENST00000622680 LEPROTL1O95214 131 aa6.3□□□□□ -1.4
LINC00963-214ENST00000622680 C3orf22Q8N5N4 141 aa6.3□□□□□ -1.4
LINC00963-214ENST00000622680 IFI27L1Q96BM0 104 aa6.3□□□□□ -1.4
LINC00963-214ENST00000622680 TMA7Q9Y2S6 64 aaKnown RBP6.3□□□□□ -1.4
LINC00963-214ENST00000622680 CHTOPQ9Y3Y2 248 aaKnown RBP6.3□□□□□ -1.4
LINC00963-214ENST00000622680 TINCRA0A1B0GVN0 87 aa6.29□□□□□ -1.4
LINC00963-214ENST00000622680 TMEM238C9JI98 176 aa6.29□□□□□ -1.4
LINC00963-214ENST00000622680 LINC00310P59036 64 aa6.29□□□□□ -1.4
LINC00963-214ENST00000622680 TMEM170BQ5T4T1 132 aa6.29□□□□□ -1.4
LINC00963-214ENST00000622680 FAM19A1Q7Z5A9 133 aa6.29□□□□□ -1.4
LINC00963-214ENST00000622680 HSPB8Q9UJY1 196 aa6.29□□□□□ -1.4
LINC00963-214ENST00000622680 IGLV5-45A0A087WSX0 123 aa6.28□□□□□ -1.4
LINC00963-214ENST00000622680 PPDPFQ9H3Y8 114 aa6.28□□□□□ -1.4
LINC00963-214ENST00000622680 S100A6P06703 90 aa6.27□□□□□ -1.41
LINC00963-214ENST00000622680 PFN2P35080 140 aa6.27□□□□□ -1.41
LINC00963-214ENST00000622680 TMEM126AQ9H061 195 aa6.27□□□□□ -1.41
LINC00963-214ENST00000622680 VPREB1P12018 145 aa6.26□□□□□ -1.41
LINC00963-214ENST00000622680 SNRPEP62304 92 aaKnown RBP6.26□□□□□ -1.41
LINC00963-214ENST00000622680 C11orf86A6NJI1 115 aa6.25□□□□□ -1.41
LINC00963-214ENST00000622680 IGLC3P0DOY3 106 aa6.25□□□□□ -1.41
LINC00963-214ENST00000622680 Q8NDZ9 215 aa6.25□□□□□ -1.41
LINC00963-214ENST00000622680 PMCHL2Q9BQD1 86 aa6.25□□□□□ -1.41
LINC00963-214ENST00000622680 MAP1LC3CQ9BXW4 147 aa6.25□□□□□ -1.41
LINC00963-214ENST00000622680 M0R378 163 aa6.24□□□□□ -1.41
LINC00963-214ENST00000622680 ZNF22P17026 224 aaPredicted RBP6.24□□□□□ -1.41
LINC00963-214ENST00000622680 COA6Q5JTJ3 125 aaKnown RBP6.24□□□□□ -1.41
LINC00963-214ENST00000622680 PLEKHB2Q96CS7 222 aa6.24□□□□□ -1.41
LINC00963-214ENST00000622680 SND1-IT1Q9HBX3 110 aa6.24□□□□□ -1.41
LINC00963-214ENST00000622680 TRAV12-1A0A0B4J245 112 aa6.23□□□□□ -1.41
LINC00963-214ENST00000622680 HIGD2AQ9BW72 106 aa6.23□□□□□ -1.41
LINC00963-214ENST00000622680 S100A2P29034 98 aa6.22□□□□□ -1.41
LINC00963-214ENST00000622680 KRTDAPP60985 99 aa6.22□□□□□ -1.41
LINC00963-214ENST00000622680 HIST3H2BBQ8N257 126 aa6.22□□□□□ -1.41
LINC00963-214ENST00000622680 ZNF625Q96I27 306 aaPredicted RBP6.22□□□□□ -1.41
LINC00963-214ENST00000622680 KRTAP4-1Q9BYQ7 146 aa6.22□□□□□ -1.41
LINC00963-214ENST00000622680 ERG28Q9UKR5 140 aa6.22□□□□□ -1.41
LINC00963-214ENST00000622680 IGLV5-39A0A0G2JS06 123 aa6.21□□□□□ -1.42
LINC00963-214ENST00000622680 C5orf52A6NGY3 159 aa6.21□□□□□ -1.42
LINC00963-214ENST00000622680 DPM2O94777 84 aa6.21□□□□□ -1.42
LINC00963-214ENST00000622680 KRTAP13-3Q3SY46 172 aa6.21□□□□□ -1.42
LINC00963-214ENST00000622680 CTAG1AP78358 180 aa6.2□□□□□ -1.42
LINC00963-214ENST00000622680 DAND5Q8N907 189 aa6.2□□□□□ -1.42
LINC00963-214ENST00000622680 SPRR4Q96PI1 79 aa6.2□□□□□ -1.42
LINC00963-214ENST00000622680 IGKCP01834 107 aa6.19□□□□□ -1.42
LINC00963-214ENST00000622680 PLNP26678 52 aa6.19□□□□□ -1.42
LINC00963-214ENST00000622680 HERVK_113P61574 105 aa6.19□□□□□ -1.42
LINC00963-214ENST00000622680 FP248Q71RG6 208 aaPredicted RBP6.19□□□□□ -1.42
LINC00963-214ENST00000622680 HIST1H2BLQ99880 126 aa6.19□□□□□ -1.42
LINC00963-214ENST00000622680 A0A0U1RRA0 63 aa6.18□□□□□ -1.42
LINC00963-214ENST00000622680 TMEM223A0PJW6 202 aa6.18□□□□□ -1.42
LINC00963-214ENST00000622680 SYS1-DBNDD2H3BUS1 97 aa6.18□□□□□ -1.42
LINC00963-214ENST00000622680 RPL24P83731 157 aaKnown RBP6.18□□□□□ -1.42
LINC00963-214ENST00000622680 ASB16-AS1Q495Z4 193 aa6.18□□□□□ -1.42
LINC00963-214ENST00000622680 SPAG11AQ6PDA7 123 aa6.18□□□□□ -1.42
LINC00963-214ENST00000622680 LINC00337Q8N6G1 96 aa6.18□□□□□ -1.42
LINC00963-214ENST00000622680 Q8NBF4 154 aa6.18□□□□□ -1.42
LINC00963-214ENST00000622680 FSIP2Q5CZC0 6907 aa6.18□□□□□ -1.42
LINC00963-214ENST00000622680 C20orf202A1L168 122 aa6.17□□□□□ -1.42
LINC00963-214ENST00000622680 LINC01547P58512 204 aaPredicted RBP6.17□□□□□ -1.42
LINC00963-214ENST00000622680 MEIG1Q5JSS6 88 aa6.17□□□□□ -1.42
LINC00963-214ENST00000622680 C3orf79P0CE67 100 aa6.16□□□□□ -1.42
LINC00963-214ENST00000622680 LGALS3P17931 250 aaKnown RBP6.16□□□□□ -1.42
LINC00963-214ENST00000622680 LINC00158P58513 81 aa6.16□□□□□ -1.42
LINC00963-214ENST00000622680 COX17Q14061 63 aa6.16□□□□□ -1.42
LINC00963-214ENST00000622680 C4orf48Q5BLP8 95 aa6.16□□□□□ -1.42
LINC00963-214ENST00000622680 PET117Q6UWS5 81 aa6.16□□□□□ -1.42
LINC00963-214ENST00000622680 LCE2DQ5TA82 110 aaPredicted RBP6.15□□□□□ -1.42
LINC00963-214ENST00000622680 NDUFA12Q9UI09 145 aa6.15□□□□□ -1.42
LINC00963-214ENST00000622680 NCR3O14931 201 aa6.14□□□□□ -1.43
LINC00963-214ENST00000622680 LEPROTO15243 131 aa6.14□□□□□ -1.43
LINC00963-214ENST00000622680 ATOH7Q8N100 152 aa6.14□□□□□ -1.43
LINC00963-214ENST00000622680 ZNF706Q9Y5V0 76 aaPredicted RBP6.14□□□□□ -1.43
LINC00963-214ENST00000622680 MYMXA0A1B0GTQ4 84 aa6.13□□□□□ -1.43
LINC00963-214ENST00000622680 J3QQQ9 107 aa6.13□□□□□ -1.43
LINC00963-214ENST00000622680 SFTA2Q6UW10 78 aa6.13□□□□□ -1.43
LINC00963-214ENST00000622680 CRCT1Q9UGL9 99 aa6.13□□□□□ -1.43
LINC00963-214ENST00000622680 PRYO14603 147 aa6.12□□□□□ -1.43
LINC00963-214ENST00000622680 SMIM13P0DJ93 91 aa6.12□□□□□ -1.43
LINC00963-214ENST00000622680 SEC61BP60468 96 aaKnown RBP6.12□□□□□ -1.43
LINC00963-214ENST00000622680 LINC01545Q5VT33 79 aa6.12□□□□□ -1.43
LINC00963-214ENST00000622680 SCGB1D1O95968 90 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms