RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 LITAFQ99732 161 aa8.56□□□□□ -1.04
NEK3-210ENST00000620675 LINC00474Q9P2X8 69 aa8.56□□□□□ -1.04
NEK3-210ENST00000620675 PKIGQ9Y2B9 76 aa8.55□□□□□ -1.04
NEK3-210ENST00000620675 EPM2AB3EWF7 344 aa8.55□□□□□ -1.04
NEK3-210ENST00000620675 HSBP1L1C9JCN9 74 aa8.55□□□□□ -1.04
NEK3-210ENST00000620675 PHF5AQ7RTV0 110 aaKnown RBP8.55□□□□□ -1.04
NEK3-210ENST00000620675 NPC2P61916 151 aa8.53□□□□□ -1.04
NEK3-210ENST00000620675 KRTAP11-1Q8IUC1 163 aa8.53□□□□□ -1.04
NEK3-210ENST00000620675 LOC105371267A0A1B0GV96 52 aa8.53□□□□□ -1.04
NEK3-210ENST00000620675 SPATA45Q537H7 98 aa8.53□□□□□ -1.04
NEK3-210ENST00000620675 SOSTDC1Q6X4U4 206 aa8.53□□□□□ -1.04
NEK3-210ENST00000620675 C14orf144Q96I85 54 aa8.52□□□□□ -1.05
NEK3-210ENST00000620675 VAMP8Q9BV40 100 aa8.52□□□□□ -1.05
NEK3-210ENST00000620675 KRTAP4-5Q9BYR2 181 aa8.52□□□□□ -1.05
NEK3-210ENST00000620675 PRR3P79522 188 aaKnown RBP8.52□□□□□ -1.05
NEK3-210ENST00000620675 LINC00528Q8N1L1 170 aa8.52□□□□□ -1.05
NEK3-210ENST00000620675 ABCA13Q86UQ4 5058 aa8.5□□□□□ -1.05
NEK3-210ENST00000620675 M0QXV9 152 aa8.5□□□□□ -1.05
NEK3-210ENST00000620675 SCGB1D4Q6XE38 83 aa8.5□□□□□ -1.05
NEK3-210ENST00000620675 C22orf24Q9Y442 160 aa8.5□□□□□ -1.05
NEK3-210ENST00000620675 VPREB1P12018 145 aa8.5□□□□□ -1.05
NEK3-210ENST00000620675 COX8AP10176 69 aa8.49□□□□□ -1.05
NEK3-210ENST00000620675 BOD1L2Q8IYS8 172 aa8.49□□□□□ -1.05
NEK3-210ENST00000620675 GAGE10A6NGK3 116 aa8.49□□□□□ -1.05
NEK3-210ENST00000620675 LINC00587B1AMM8 73 aa8.49□□□□□ -1.05
NEK3-210ENST00000620675 FLG2Q5D862 2391 aaPredicted RBP8.48□□□□□ -1.05
NEK3-210ENST00000620675 TIMM17BO60830 172 aa8.48□□□□□ -1.05
NEK3-210ENST00000620675 Q8N1X5 172 aa8.48□□□□□ -1.05
NEK3-210ENST00000620675 PLA2G2DQ9UNK4 145 aa8.48□□□□□ -1.05
NEK3-210ENST00000620675 KRTAP10-4P60372 401 aaPredicted RBP8.47□□□□□ -1.05
NEK3-210ENST00000620675 Q5VSD8 79 aa8.47□□□□□ -1.05
NEK3-210ENST00000620675 PKHD1L1Q86WI1 4243 aa8.47□□□□□ -1.05
NEK3-210ENST00000620675 LINC00308Q8TCZ7 52 aa8.47□□□□□ -1.05
NEK3-210ENST00000620675 RPL37AP8A6NKH3 93 aa8.46□□□□□ -1.05
NEK3-210ENST00000620675 C7orf33Q8WU49 177 aa8.46□□□□□ -1.05
NEK3-210ENST00000620675 LINC00167Q96N53 147 aa8.46□□□□□ -1.05
NEK3-210ENST00000620675 IGLV5-37A0A075B6J1 123 aa8.45□□□□□ -1.06
NEK3-210ENST00000620675 LOC107984156A0A0G2JMH3 177 aa8.45□□□□□ -1.06
NEK3-210ENST00000620675 MRPL55Q7Z7F7 128 aaKnown RBP8.45□□□□□ -1.06
NEK3-210ENST00000620675 ARL17AQ8IVW1 177 aa8.45□□□□□ -1.06
NEK3-210ENST00000620675 NCR3O14931 201 aa8.45□□□□□ -1.06
NEK3-210ENST00000620675 NKAPP1Q8N9T2 125 aa8.44□□□□□ -1.06
NEK3-210ENST00000620675 SPANXDQ9BXN6 97 aa8.44□□□□□ -1.06
NEK3-210ENST00000620675 SPANXCQ9NY87 97 aa8.44□□□□□ -1.06
NEK3-210ENST00000620675 MYCBP2O75592 4640 aa8.44□□□□□ -1.06
NEK3-210ENST00000620675 TMEM238C9JI98 176 aa8.44□□□□□ -1.06
NEK3-210ENST00000620675 C2orf91Q6ZV80 131 aa8.44□□□□□ -1.06
NEK3-210ENST00000620675 PSORS1C2Q9UIG4 136 aa8.44□□□□□ -1.06
NEK3-210ENST00000620675 IGKV2-28A0A075B6P5 120 aa8.43□□□□□ -1.06
NEK3-210ENST00000620675 IGKV2D-28P01615 120 aa8.43□□□□□ -1.06
NEK3-210ENST00000620675 MIEN1Q9BRT3 115 aa8.43□□□□□ -1.06
NEK3-210ENST00000620675 DLEU1O43261 78 aa8.42□□□□□ -1.06
NEK3-210ENST00000620675 HNRNPA3P51991 378 aaKnown RBP8.42□□□□□ -1.06
NEK3-210ENST00000620675 RPL37AP61513 92 aaKnown RBP8.42□□□□□ -1.06
NEK3-210ENST00000620675 UBE2BP63146 152 aa8.42□□□□□ -1.06
NEK3-210ENST00000620675 RPL24P83731 157 aaKnown RBP8.42□□□□□ -1.06
NEK3-210ENST00000620675 SLC25A34Q6PIV7 304 aa8.42□□□□□ -1.06
NEK3-210ENST00000620675 MUSTN1Q8IVN3 82 aa8.42□□□□□ -1.06
NEK3-210ENST00000620675 FAM229AH3BQW9 127 aa8.42□□□□□ -1.06
NEK3-210ENST00000620675 LRP1Q07954 4544 aaKnown RBP8.41□□□□□ -1.06
NEK3-210ENST00000620675 PCLOQ9Y6V0 5065 aa8.4□□□□□ -1.06
NEK3-210ENST00000620675 SMIM6P0DI80 62 aa8.4□□□□□ -1.06
NEK3-210ENST00000620675 PRO1933Q9H354 126 aa8.4□□□□□ -1.06
NEK3-210ENST00000620675 SPANXB1Q9NS25 103 aaPredicted RBP8.4□□□□□ -1.06
NEK3-210ENST00000620675 S100A12P80511 92 aa8.39□□□□□ -1.07
NEK3-210ENST00000620675 SRSF9Q13242 221 aaKnown RBP eCLIP8.39□□□□□ -1.07
NEK3-210ENST00000620675 LBHQ53QV2 105 aaPredicted RBP8.39□□□□□ -1.07
NEK3-210ENST00000620675 IGLV1-50A0A075B6I6 118 aa8.39□□□□□ -1.07
NEK3-210ENST00000620675 M0R378 163 aa8.39□□□□□ -1.07
NEK3-210ENST00000620675 TRBV10-3A0A0K0K1G6 114 aa8.38□□□□□ -1.07
NEK3-210ENST00000620675 NDUFC2O95298 119 aa8.38□□□□□ -1.07
NEK3-210ENST00000620675 C1orf137Q5JT78 98 aa8.38□□□□□ -1.07
NEK3-210ENST00000620675 LINC00337Q8N6G1 96 aa8.37□□□□□ -1.07
NEK3-210ENST00000620675 PLA2G1BP04054 148 aaKnown RBP8.36□□□□□ -1.07
NEK3-210ENST00000620675 IFITM1P13164 125 aa8.36□□□□□ -1.07
NEK3-210ENST00000620675 Q6ZVH6 145 aa8.36□□□□□ -1.07
NEK3-210ENST00000620675 HIST1H4GQ99525 98 aa8.36□□□□□ -1.07
NEK3-210ENST00000620675 HIGD1BQ9P298 99 aa8.36□□□□□ -1.07
NEK3-210ENST00000620675 C12orf57Q99622 126 aa8.36□□□□□ -1.07
NEK3-210ENST00000620675 FAT3Q8TDW7 4589 aa8.35□□□□□ -1.07
NEK3-210ENST00000620675 TRBV10-2A0A0K0K1G8 114 aa8.34□□□□□ -1.07
NEK3-210ENST00000620675 A4D1N5 150 aa8.34□□□□□ -1.07
NEK3-210ENST00000620675 IGLV6-57P01721 117 aa8.34□□□□□ -1.07
NEK3-210ENST00000620675 DDTP30046 118 aa8.34□□□□□ -1.07
NEK3-210ENST00000620675 TMEM126AQ9H061 195 aa8.34□□□□□ -1.07
NEK3-210ENST00000620675 UQCR10Q9UDW1 63 aa8.34□□□□□ -1.07
NEK3-210ENST00000620675 IGLV7-43P04211 117 aa8.32□□□□□ -1.08
NEK3-210ENST00000620675 OR13C6PQ8NH95 151 aa8.32□□□□□ -1.08
NEK3-210ENST00000620675 S100A7L2Q5SY68 101 aa8.31□□□□□ -1.08
NEK3-210ENST00000620675 REG3GQ6UW15 175 aa8.31□□□□□ -1.08
NEK3-210ENST00000620675 PPDPFQ9H3Y8 114 aa8.31□□□□□ -1.08
NEK3-210ENST00000620675 KCNQ1DNQ9H478 68 aa8.31□□□□□ -1.08
NEK3-210ENST00000620675 LINC00518Q8N0U6 118 aa8.31□□□□□ -1.08
NEK3-210ENST00000620675 BCE1O60756 84 aa8.3□□□□□ -1.08
NEK3-210ENST00000620675 PRLHP81277 87 aa8.3□□□□□ -1.08
NEK3-210ENST00000620675 COPS9Q8WXC6 57 aa8.3□□□□□ -1.08
NEK3-210ENST00000620675 FXYD2P54710 66 aa8.3□□□□□ -1.08
NEK3-210ENST00000620675 KRTAP4-16G5E9R7 235 aaPredicted RBP8.29□□□□□ -1.08
NEK3-210ENST00000620675 PRYO14603 147 aa8.29□□□□□ -1.08
NEK3-210ENST00000620675 KRTAP13-1Q8IUC0 172 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms