RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 GNG13Q9P2W3 67 aa2.46□□□□□ -2.02
SNCA-213ENST00000618500 GPR98Q8WXG9 6306 aa2.46□□□□□ -2.02
SNCA-213ENST00000618500 FXYD6-FXYD2A0A087WZ82 144 aa2.45□□□□□ -2.02
SNCA-213ENST00000618500 LOC105371267A0A1B0GV96 52 aa2.45□□□□□ -2.02
SNCA-213ENST00000618500 SMLR1H3BR10 107 aa2.45□□□□□ -2.02
SNCA-213ENST00000618500 KRTAP19-6Q3LI70 58 aa2.45□□□□□ -2.02
SNCA-213ENST00000618500 OCC1Q8TAD7 63 aa2.45□□□□□ -2.02
SNCA-213ENST00000618500 MED9Q9NWA0 146 aa2.45□□□□□ -2.02
SNCA-213ENST00000618500 RPL24P83731 157 aaKnown RBP2.45□□□□□ -2.02
SNCA-213ENST00000618500 MRPL51Q4U2R6 128 aaKnown RBP2.45□□□□□ -2.02
SNCA-213ENST00000618500 FAM74A3Q4VXF1 159 aa2.45□□□□□ -2.02
SNCA-213ENST00000618500 PCOTHQ58A44 107 aa2.45□□□□□ -2.02
SNCA-213ENST00000618500 Q5XG85 94 aa2.45□□□□□ -2.02
SNCA-213ENST00000618500 C2orf66Q6UXQ4 117 aa2.45□□□□□ -2.02
SNCA-213ENST00000618500 CBLN2Q8IUK8 224 aa2.45□□□□□ -2.02
SNCA-213ENST00000618500 IGLV8-61A0A075B6I0 122 aa2.44□□□□□ -2.02
SNCA-213ENST00000618500 LINC01549A6NIU2 74 aa2.44□□□□□ -2.02
SNCA-213ENST00000618500 S100A8P05109 93 aa2.44□□□□□ -2.02
SNCA-213ENST00000618500 RPL39P62891 51 aaKnown RBP2.44□□□□□ -2.02
SNCA-213ENST00000618500 PAPPA-AS1Q5QFB9 102 aa2.44□□□□□ -2.02
SNCA-213ENST00000618500 FAM19A1Q7Z5A9 133 aa2.44□□□□□ -2.02
SNCA-213ENST00000618500 RPL37AP8A6NKH3 93 aa2.44□□□□□ -2.02
SNCA-213ENST00000618500 RPL37P61927 97 aaKnown RBP2.44□□□□□ -2.02
SNCA-213ENST00000618500 C6orf226Q5I0X4 101 aa2.44□□□□□ -2.02
SNCA-213ENST00000618500 LIMD2Q9BT23 127 aa2.44□□□□□ -2.02
SNCA-213ENST00000618500 XAGE1AQ9HD64 81 aa2.44□□□□□ -2.02
SNCA-213ENST00000618500 HIGD1CA8MV81 97 aa2.44□□□□□ -2.02
SNCA-213ENST00000618500 KRTAP4-16G5E9R7 235 aaPredicted RBP2.44□□□□□ -2.02
SNCA-213ENST00000618500 M0R2T5 61 aa2.44□□□□□ -2.02
SNCA-213ENST00000618500 SMIM27A0A1W2PRY6 76 aa2.43□□□□□ -2.02
SNCA-213ENST00000618500 SMIM1B2RUZ4 78 aa2.43□□□□□ -2.02
SNCA-213ENST00000618500 PRLHP81277 87 aa2.43□□□□□ -2.02
SNCA-213ENST00000618500 AKAP14Q86UN6 197 aa2.43□□□□□ -2.02
SNCA-213ENST00000618500 TIMM17AQ99595 171 aa2.43□□□□□ -2.02
SNCA-213ENST00000618500 BATF3Q9NR55 127 aa2.43□□□□□ -2.02
SNCA-213ENST00000618500 NAT8BQ9UHF3 227 aa2.43□□□□□ -2.02
SNCA-213ENST00000618500 TINCRA0A1B0GVN0 87 aa2.43□□□□□ -2.02
SNCA-213ENST00000618500 KANTRA0A1W2PQU2 76 aa2.43□□□□□ -2.02
SNCA-213ENST00000618500 IGIPA6NJ69 53 aa2.43□□□□□ -2.02
SNCA-213ENST00000618500 F8W036 122 aa2.43□□□□□ -2.02
SNCA-213ENST00000618500 CD164Q04900 197 aa2.43□□□□□ -2.02
SNCA-213ENST00000618500 COX7B2Q8TF08 81 aa2.43□□□□□ -2.02
SNCA-213ENST00000618500 V9GYV3 84 aa2.43□□□□□ -2.02
SNCA-213ENST00000618500 IGLV5-39A0A0G2JS06 123 aa2.42□□□□□ -2.02
SNCA-213ENST00000618500 A0A1B0GXF2 115 aa2.42□□□□□ -2.02
SNCA-213ENST00000618500 SMKR1H3BMG3 65 aa2.42□□□□□ -2.02
SNCA-213ENST00000618500 ARPC5O15511 151 aa2.42□□□□□ -2.02
SNCA-213ENST00000618500 FA2HQ7L5A8 372 aa2.42□□□□□ -2.02
SNCA-213ENST00000618500 KCNQ1DNQ9H478 68 aa2.42□□□□□ -2.02
SNCA-213ENST00000618500 NEBP20929 6669 aa2.42□□□□□ -2.02
SNCA-213ENST00000618500 ORMDL2Q53FV1 153 aa2.42□□□□□ -2.02
SNCA-213ENST00000618500 ATP5L2Q7Z4Y8 100 aa2.42□□□□□ -2.02
SNCA-213ENST00000618500 CYSLTR1Q9Y271 337 aa2.42□□□□□ -2.02
SNCA-213ENST00000618500 LINC01546A6NGU7 62 aa2.41□□□□□ -2.02
SNCA-213ENST00000618500 TMEM238C9JI98 176 aa2.41□□□□□ -2.02
SNCA-213ENST00000618500 CKS2P33552 79 aa2.41□□□□□ -2.02
SNCA-213ENST00000618500 Q8N8P6 123 aa2.41□□□□□ -2.02
SNCA-213ENST00000618500 URB1-AS1Q96HZ7 61 aa2.41□□□□□ -2.02
SNCA-213ENST00000618500 A0A0U1RRA0 63 aa2.41□□□□□ -2.02
SNCA-213ENST00000618500 H0Y8G0 127 aa2.41□□□□□ -2.02
SNCA-213ENST00000618500 MPLKIPQ8TAP9 179 aa2.41□□□□□ -2.02
SNCA-213ENST00000618500 SCO1O75880 301 aa2.4□□□□□ -2.02
SNCA-213ENST00000618500 NPYP01303 97 aa2.4□□□□□ -2.02
SNCA-213ENST00000618500 SMCR5Q8TEV8 140 aa2.4□□□□□ -2.02
SNCA-213ENST00000618500 IGKV2-28A0A075B6P5 120 aa2.4□□□□□ -2.03
SNCA-213ENST00000618500 IGKV2D-28P01615 120 aa2.4□□□□□ -2.03
SNCA-213ENST00000618500 SPRR1BP22528 89 aa2.4□□□□□ -2.03
SNCA-213ENST00000618500 COX6B2Q6YFQ2 88 aa2.4□□□□□ -2.03
SNCA-213ENST00000618500 ORMDL3Q8N138 153 aa2.4□□□□□ -2.03
SNCA-213ENST00000618500 SND1-IT1Q9HBX3 110 aa2.4□□□□□ -2.03
SNCA-213ENST00000618500 CDKN2A-AS1Q9UH64 79 aa2.4□□□□□ -2.03
SNCA-213ENST00000618500 TRAV9-1A0A075B6T8 112 aa2.39□□□□□ -2.03
SNCA-213ENST00000618500 D6R8Y8 96 aa2.39□□□□□ -2.03
SNCA-213ENST00000618500 ATP5LO75964 103 aa2.39□□□□□ -2.03
SNCA-213ENST00000618500 RAB5AP20339 215 aa2.39□□□□□ -2.03
SNCA-213ENST00000618500 ALKAL2Q6UX46 152 aa2.39□□□□□ -2.03
SNCA-213ENST00000618500 TOMM6Q96B49 74 aa2.39□□□□□ -2.03
SNCA-213ENST00000618500 MT2AP02795 61 aa2.39□□□□□ -2.03
SNCA-213ENST00000618500 SEC61GP60059 68 aa2.39□□□□□ -2.03
SNCA-213ENST00000618500 BOD1L2Q8IYS8 172 aa2.39□□□□□ -2.03
SNCA-213ENST00000618500 TOMM7Q9P0U1 55 aa2.39□□□□□ -2.03
SNCA-213ENST00000618500 A0A1B0GV50 99 aa2.39□□□□□ -2.03
SNCA-213ENST00000618500 MOBPQ13875 183 aa2.39□□□□□ -2.03
SNCA-213ENST00000618500 KIAA1644Q3SXP7 199 aa2.39□□□□□ -2.03
SNCA-213ENST00000618500 MAP1LC3AQ9H492 121 aa2.39□□□□□ -2.03
SNCA-213ENST00000618500 ERG28Q9UKR5 140 aa2.39□□□□□ -2.03
SNCA-213ENST00000618500 LOC107984156A0A0G2JMH3 177 aa2.38□□□□□ -2.03
SNCA-213ENST00000618500 ARL17AQ8IVW1 177 aa2.38□□□□□ -2.03
SNCA-213ENST00000618500 HIGD2AQ9BW72 106 aa2.38□□□□□ -2.03
SNCA-213ENST00000618500 H3BRM9 83 aa2.38□□□□□ -2.03
SNCA-213ENST00000618500 RAB14P61106 215 aa2.38□□□□□ -2.03
SNCA-213ENST00000618500 GAGE2AQ6NT46 116 aa2.38□□□□□ -2.03
SNCA-213ENST00000618500 NXT2Q9NPJ8 142 aaKnown RBP2.38□□□□□ -2.03
SNCA-213ENST00000618500 IGLC3P0DOY3 106 aa2.37□□□□□ -2.03
SNCA-213ENST00000618500 KRTAP20-1Q3LI63 56 aa2.37□□□□□ -2.03
SNCA-213ENST00000618500 Q8NDZ9 215 aa2.37□□□□□ -2.03
SNCA-213ENST00000618500 PRELID3AQ96N28 172 aa2.37□□□□□ -2.03
SNCA-213ENST00000618500 MACF1Q9UPN3 7388 aaKnown RBP2.37□□□□□ -2.03
SNCA-213ENST00000618500 TRBV10-2A0A0K0K1G8 114 aa2.37□□□□□ -2.03
SNCA-213ENST00000618500 KRTAP5-9P26371 169 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms