RNA–Protein interactions for RNA: ENST00000616271.4

CADM1-222, Transcript of cell adhesion molecule 1, human

TSL 5 BASIC

Gene CADM1, Length 1,246 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CADM1-222	ENST00000616271	C20orf202	A1L168	122 aa		11.36	□□□□□ -0.59
CADM1-222	ENST00000616271	LBH	Q53QV2	105 aa	Predicted RBP	11.36	□□□□□ -0.59
CADM1-222	ENST00000616271	PKHD1L1	Q86WI1	4243 aa		11.36	□□□□□ -0.59
CADM1-222	ENST00000616271	S100A2	P29034	98 aa		11.35	□□□□□ -0.59
CADM1-222	ENST00000616271	MRPL55	Q7Z7F7	128 aa	Known RBP	11.35	□□□□□ -0.59
CADM1-222	ENST00000616271	KRTAP11-1	Q8IUC1	163 aa		11.35	□□□□□ -0.59
CADM1-222	ENST00000616271	SMIM13	P0DJ93	91 aa		11.34	□□□□□ -0.59
CADM1-222	ENST00000616271		A0A0U1RRA0	63 aa		11.33	□□□□□ -0.6
CADM1-222	ENST00000616271	C1orf137	Q5JT78	98 aa		11.33	□□□□□ -0.6
CADM1-222	ENST00000616271	NKAPP1	Q8N9T2	125 aa		11.33	□□□□□ -0.6
CADM1-222	ENST00000616271	HIST1H2BL	Q99880	126 aa		11.33	□□□□□ -0.6
CADM1-222	ENST00000616271	AKR1D1	P51857	326 aa		11.32	□□□□□ -0.6
CADM1-222	ENST00000616271	KRTAP29-1	A8MX34	341 aa	Predicted RBP	11.31	□□□□□ -0.6
CADM1-222	ENST00000616271	VPREB1	P12018	145 aa		11.31	□□□□□ -0.6
CADM1-222	ENST00000616271	RPL24	P83731	157 aa	Known RBP	11.31	□□□□□ -0.6
CADM1-222	ENST00000616271	MIR7-3HG	Q8N6C7	128 aa		11.31	□□□□□ -0.6
CADM1-222	ENST00000616271	SPINK6	Q6UWN8	80 aa		11.3	□□□□□ -0.6
CADM1-222	ENST00000616271	LINC00167	Q96N53	147 aa		11.3	□□□□□ -0.6
CADM1-222	ENST00000616271	OXT	P01178	125 aa		11.29	□□□□□ -0.6
CADM1-222	ENST00000616271	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
CADM1-222	ENST00000616271	IGLV7-43	P04211	117 aa		11.28	□□□□□ -0.6
CADM1-222	ENST00000616271	SNRPE	P62304	92 aa	Known RBP	11.28	□□□□□ -0.6
CADM1-222	ENST00000616271	MYCBP2	O75592	4640 aa		11.28	□□□□□ -0.6
CADM1-222	ENST00000616271		Q8NDZ9	215 aa		11.27	□□□□□ -0.61
CADM1-222	ENST00000616271	IGKV2D-26	A0A0A0MRZ7	120 aa		11.26	□□□□□ -0.61
CADM1-222	ENST00000616271	GAGE10	A6NGK3	116 aa		11.26	□□□□□ -0.61
CADM1-222	ENST00000616271	C5orf52	A6NGY3	159 aa		11.26	□□□□□ -0.61
CADM1-222	ENST00000616271		A0A0J9YXY3	114 aa		11.25	□□□□□ -0.61
CADM1-222	ENST00000616271	RPL37AP8	A6NKH3	93 aa		11.25	□□□□□ -0.61
CADM1-222	ENST00000616271	ATOH7	Q8N100	152 aa		11.25	□□□□□ -0.61
CADM1-222	ENST00000616271		J3QL48	77 aa		11.24	□□□□□ -0.61
CADM1-222	ENST00000616271	BOD1L2	Q8IYS8	172 aa		11.24	□□□□□ -0.61
CADM1-222	ENST00000616271	LOC107984156	A0A0G2JMH3	177 aa		11.23	□□□□□ -0.61
CADM1-222	ENST00000616271	ZNF815P	A8K554	130 aa		11.23	□□□□□ -0.61
CADM1-222	ENST00000616271	ARL17A	Q8IVW1	177 aa		11.23	□□□□□ -0.61
CADM1-222	ENST00000616271	DAND5	Q8N907	189 aa		11.23	□□□□□ -0.61
CADM1-222	ENST00000616271	ANKRD39	Q53RE8	183 aa		11.22	□□□□□ -0.61
CADM1-222	ENST00000616271	REG3G	Q6UW15	175 aa		11.22	□□□□□ -0.61
CADM1-222	ENST00000616271	IGLV1-50	A0A075B6I6	118 aa		11.21	□□□□□ -0.61
CADM1-222	ENST00000616271	IGKV2-28	A0A075B6P5	120 aa		11.21	□□□□□ -0.61
CADM1-222	ENST00000616271	IGKV2D-28	P01615	120 aa		11.21	□□□□□ -0.61
CADM1-222	ENST00000616271	MIEN1	Q9BRT3	115 aa		11.21	□□□□□ -0.61
CADM1-222	ENST00000616271		M0R378	163 aa		11.2	□□□□□ -0.62
CADM1-222	ENST00000616271	BCE1	O60756	84 aa		11.2	□□□□□ -0.62
CADM1-222	ENST00000616271	TIMM17B	O60830	172 aa		11.2	□□□□□ -0.62
CADM1-222	ENST00000616271	DIRC1	Q969H9	104 aa		11.2	□□□□□ -0.62
CADM1-222	ENST00000616271	TTTY13	Q9BZ97	58 aa		11.2	□□□□□ -0.62
CADM1-222	ENST00000616271	DMBT1	Q9UGM3	2413 aa	Predicted RBP	11.2	□□□□□ -0.62
CADM1-222	ENST00000616271	FAT3	Q8TDW7	4589 aa		11.18	□□□□□ -0.62
CADM1-222	ENST00000616271	LRP1	Q07954	4544 aa	Known RBP	11.18	□□□□□ -0.62
CADM1-222	ENST00000616271		H0Y9J4	135 aa		11.18	□□□□□ -0.62
CADM1-222	ENST00000616271	ADAMTSL4-AS1	Q5T5F5	129 aa		11.18	□□□□□ -0.62
CADM1-222	ENST00000616271	LITAF	Q99732	161 aa		11.18	□□□□□ -0.62
CADM1-222	ENST00000616271	NCR3	O14931	201 aa		11.17	□□□□□ -0.62
CADM1-222	ENST00000616271	ZNF861P	O60384	105 aa		11.17	□□□□□ -0.62
CADM1-222	ENST00000616271	LINC01600	Q96MT4	127 aa		11.16	□□□□□ -0.62
CADM1-222	ENST00000616271	HSBP1L1	C9JCN9	74 aa		11.15	□□□□□ -0.62
CADM1-222	ENST00000616271	NDUFC2	O95298	119 aa		11.15	□□□□□ -0.62
CADM1-222	ENST00000616271	RPL28	P46779	137 aa	Known RBP	11.15	□□□□□ -0.62
CADM1-222	ENST00000616271	SOSTDC1	Q6X4U4	206 aa		11.15	□□□□□ -0.62
CADM1-222	ENST00000616271	TMEM126A	Q9H061	195 aa		11.15	□□□□□ -0.62
CADM1-222	ENST00000616271	TRBV10-2	A0A0K0K1G8	114 aa		11.14	□□□□□ -0.63
CADM1-222	ENST00000616271	SCGB1D4	Q6XE38	83 aa		11.14	□□□□□ -0.63
CADM1-222	ENST00000616271	SPANXB1	Q9NS25	103 aa	Predicted RBP	11.14	□□□□□ -0.63
CADM1-222	ENST00000616271	TMEM238	C9JI98	176 aa		11.13	□□□□□ -0.63
CADM1-222	ENST00000616271	SCGB1D1	O95968	90 aa		11.13	□□□□□ -0.63
CADM1-222	ENST00000616271	MT1HL1	P0DM35	61 aa		11.13	□□□□□ -0.63
CADM1-222	ENST00000616271	NPC2	P61916	151 aa		11.13	□□□□□ -0.63
CADM1-222	ENST00000616271	PRY	O14603	147 aa		11.12	□□□□□ -0.63
CADM1-222	ENST00000616271	UBE2A	P49459	152 aa		11.12	□□□□□ -0.63
CADM1-222	ENST00000616271	KRTAP13-1	Q8IUC0	172 aa		11.12	□□□□□ -0.63
CADM1-222	ENST00000616271	PCP2	Q8IVA1	136 aa		11.12	□□□□□ -0.63
CADM1-222	ENST00000616271	LINC00308	Q8TCZ7	52 aa		11.12	□□□□□ -0.63
CADM1-222	ENST00000616271	EIF4EBP3	O60516	100 aa	Predicted RBP	11.11	□□□□□ -0.63
CADM1-222	ENST00000616271	SPANXD	Q9BXN6	97 aa		11.11	□□□□□ -0.63
CADM1-222	ENST00000616271	SPANXC	Q9NY87	97 aa		11.11	□□□□□ -0.63
CADM1-222	ENST00000616271	TRBV10-3	A0A0K0K1G6	114 aa		11.1	□□□□□ -0.63
CADM1-222	ENST00000616271	FAM19A1	Q7Z5A9	133 aa		11.1	□□□□□ -0.63
CADM1-222	ENST00000616271	KCNQ1DN	Q9H478	68 aa		11.09	□□□□□ -0.63
CADM1-222	ENST00000616271	DDT	P30046	118 aa		11.08	□□□□□ -0.64
CADM1-222	ENST00000616271	S100A12	P80511	92 aa		11.08	□□□□□ -0.64
CADM1-222	ENST00000616271	KRTAP1-4	P0C5Y4	121 aa		11.07	□□□□□ -0.64
CADM1-222	ENST00000616271	SPRR1A	P35321	89 aa		11.07	□□□□□ -0.64
CADM1-222	ENST00000616271	PRLH	P81277	87 aa		11.07	□□□□□ -0.64
CADM1-222	ENST00000616271		Q6ZVH6	145 aa		11.06	□□□□□ -0.64
CADM1-222	ENST00000616271	COPS9	Q8WXC6	57 aa		11.06	□□□□□ -0.64
CADM1-222	ENST00000616271	PPDPF	Q9H3Y8	114 aa		11.06	□□□□□ -0.64
CADM1-222	ENST00000616271	IGLV6-57	P01721	117 aa		11.05	□□□□□ -0.64
CADM1-222	ENST00000616271	IFITM1	P13164	125 aa		11.05	□□□□□ -0.64
CADM1-222	ENST00000616271	S100A7L2	Q5SY68	101 aa		11.05	□□□□□ -0.64
CADM1-222	ENST00000616271	LINC00337	Q8N6G1	96 aa		11.05	□□□□□ -0.64
CADM1-222	ENST00000616271	KRTAP10-8	P60410	259 aa		11.04	□□□□□ -0.64
CADM1-222	ENST00000616271	TMA7	Q9Y2S6	64 aa	Known RBP	11.04	□□□□□ -0.64
CADM1-222	ENST00000616271	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	11.03	□□□□□ -0.64
CADM1-222	ENST00000616271	JOSD1	Q15040	202 aa	Predicted RBP	11.02	□□□□□ -0.65
CADM1-222	ENST00000616271	ETDC	A0A1B0GVM5	59 aa		11.01	□□□□□ -0.65
CADM1-222	ENST00000616271	LINC00518	Q8N0U6	118 aa		11.01	□□□□□ -0.65
CADM1-222	ENST00000616271	CBY1	Q9Y3M2	126 aa		11.01	□□□□□ -0.65
CADM1-222	ENST00000616271	TRAV23DV6	A0A075B6W5	121 aa		11	□□□□□ -0.65
CADM1-222	ENST00000616271	PRR26	Q8N8Z3	221 aa		11	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms